Gene annotation
Transcriptome id Sobic.004G038000.2,Sobic.004G038000.1
Synonym Sb04g003260
Functional annotation expressed protein
UniProt C5XUK1 , A0A1Z5RLA6
Pfam -
Panther DB PTHR35510
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G35320 : -
RAP-DB (Rice) LOC_Os02g04860.1 : expressed protein
MaizeGDB (Corn) Zm00025a034895
Brachypodium KQJ93284
Barley -
Wheat TraesCS6B02G141700 , TraesCS6D02G102700 , TraesCS6A02G112500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G074200 abhydrolase domain-containing protein FAM108C1, putative, expressed -
2 Sobic.002G416200 - -
3 Sobic.007G085350 - -
4 Sobic.002G018600 OsFBX234 - F-box domain containing protein, expressed -
5 Sobic.002G056600 START domain containing protein, putative, expressed -
6 Sobic.010G257400 expressed protein -
7 Sobic.007G072800 OsFBX275 - F-box domain containing protein, expressed -
8 Sobic.009G114600 OsSigP6 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
9 Sobic.005G121100 ZOS11-03 - C2H2 zinc finger protein, expressed -
10 Sobic.009G194700 IQ calmodulin-binding motif family protein, putative, expressed -
11 Sobic.006G260600 OTU-like cysteine protease family protein, putative, expressed K13717: OTU domain-containing protein 3
12 Sobic.001G423700 - K13171: SRRM1, serine/arginine repetitive matrix protein 1
13 Sobic.003G219400 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
14 Sobic.001G505200 ras-related protein, putative, expressed K07910: Ras-related protein Rab-18
15 Sobic.003G221300 - -
16 Sobic.002G126200 expressed protein -
17 Sobic.006G073150 - -
18 Sobic.002G018901 - -
19 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
20 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma


Gene co-expression network
sample Sobic004G038000 Sobic004G038000 Sobic004G074200 Sobic004G074200 Sobic004G038000--Sobic004G074200 Sobic002G416200 Sobic002G416200 Sobic004G038000--Sobic002G416200 Sobic007G085350 Sobic007G085350 Sobic004G038000--Sobic007G085350 Sobic002G018600 Sobic002G018600 Sobic004G038000--Sobic002G018600 Sobic002G056600 Sobic002G056600 Sobic004G038000--Sobic002G056600 Sobic010G257400 Sobic010G257400 Sobic004G038000--Sobic010G257400 Sobic007G072800 Sobic007G072800 Sobic004G038000--Sobic007G072800 Sobic009G114600 Sobic009G114600 Sobic004G038000--Sobic009G114600 Sobic005G121100 Sobic005G121100 Sobic004G038000--Sobic005G121100 Sobic004G074200--Sobic009G114600 Sobic010G153532 Sobic010G153532 Sobic004G074200--Sobic010G153532 Sobic003G221300 Sobic003G221300 Sobic004G074200--Sobic003G221300 Sobic005G097700 Sobic005G097700 Sobic004G074200--Sobic005G097700 Sobic002G034400 Sobic002G034400 Sobic004G074200--Sobic002G034400 Sobic004G074200--Sobic007G085350 Sobic002G175550 Sobic002G175550 Sobic004G074200--Sobic002G175550 Sobic004G074200--Sobic002G416200 Sobic003G219400 Sobic003G219400 Sobic004G074200--Sobic003G219400 Sobic006G073150 Sobic006G073150 Sobic002G416200--Sobic006G073150 Sobic003G001500 Sobic003G001500 Sobic002G416200--Sobic003G001500 Sobic002G416200--Sobic004G074200 Sobic005G114600 Sobic005G114600 Sobic002G416200--Sobic005G114600 Sobic002G416200--Sobic007G072800 Sobic002G416200--Sobic002G034400 Sobic002G416200--Sobic004G038000 Sobic002G416200--Sobic003G221300 Sobic002G416200--Sobic010G153532 Sobic004G356600 Sobic004G356600 Sobic007G085350--Sobic004G356600 Sobic002G356700 Sobic002G356700 Sobic007G085350--Sobic002G356700 Sobic006G272450 Sobic006G272450 Sobic007G085350--Sobic006G272450 Sobic009G010800 Sobic009G010800 Sobic007G085350--Sobic009G010800 Sobic006G090201 Sobic006G090201 Sobic007G085350--Sobic006G090201 Sobic001G361500 Sobic001G361500 Sobic007G085350--Sobic001G361500 Sobic010G231400 Sobic010G231400 Sobic007G085350--Sobic010G231400 Sobic006G209100 Sobic006G209100 Sobic007G085350--Sobic006G209100 Sobic006G239100 Sobic006G239100 Sobic007G085350--Sobic006G239100 Sobic003G433500 Sobic003G433500 Sobic002G018600--Sobic003G433500 Sobic002G151600 Sobic002G151600 Sobic002G018600--Sobic002G151600 Sobic008G034600 Sobic008G034600 Sobic002G018600--Sobic008G034600 Sobic002G313300 Sobic002G313300 Sobic002G018600--Sobic002G313300 Sobic006G013500 Sobic006G013500 Sobic002G018600--Sobic006G013500 Sobic002G421700 Sobic002G421700 Sobic002G018600--Sobic002G421700 Sobic006G080300 Sobic006G080300 Sobic002G018600--Sobic006G080300 Sobic007G046900 Sobic007G046900 Sobic002G018600--Sobic007G046900 Sobic010G194700 Sobic010G194700 Sobic002G018600--Sobic010G194700 Sobic010G237650 Sobic010G237650 Sobic002G056600--Sobic010G237650 Sobic010G199800 Sobic010G199800 Sobic002G056600--Sobic010G199800 Sobic001G049600 Sobic001G049600 Sobic002G056600--Sobic001G049600 Sobic010G073600 Sobic010G073600 Sobic002G056600--Sobic010G073600 Sobic005G207100 Sobic005G207100 Sobic002G056600--Sobic005G207100 Sobic003G389800 Sobic003G389800 Sobic002G056600--Sobic003G389800 Sobic002G033600 Sobic002G033600 Sobic002G056600--Sobic002G033600 Sobic004G015800 Sobic004G015800 Sobic002G056600--Sobic004G015800 Sobic005G162600 Sobic005G162600 Sobic002G056600--Sobic005G162600 Sobic001G083600 Sobic001G083600 Sobic010G257400--Sobic001G083600 Sobic001G390500 Sobic001G390500 Sobic010G257400--Sobic001G390500 Sobic002G084300 Sobic002G084300 Sobic010G257400--Sobic002G084300 Sobic001G038100 Sobic001G038100 Sobic010G257400--Sobic001G038100 Sobic001G056200 Sobic001G056200 Sobic010G257400--Sobic001G056200 Sobic007G111100 Sobic007G111100 Sobic010G257400--Sobic007G111100 Sobic004G263900 Sobic004G263900 Sobic010G257400--Sobic004G263900 Sobic009G036200 Sobic009G036200 Sobic010G257400--Sobic009G036200 Sobic003G189900 Sobic003G189900 Sobic010G257400--Sobic003G189900 Sobic007G072800--Sobic006G073150 Sobic002G108600 Sobic002G108600 Sobic007G072800--Sobic002G108600 Sobic007G072800--Sobic003G221300 Sobic001G451200 Sobic001G451200 Sobic007G072800--Sobic001G451200 Sobic003G060400 Sobic003G060400 Sobic007G072800--Sobic003G060400 Sobic006G204200 Sobic006G204200 Sobic007G072800--Sobic006G204200 Sobic009G213300 Sobic009G213300 Sobic007G072800--Sobic009G213300 Sobic010G146200 Sobic010G146200 Sobic007G072800--Sobic010G146200 Sobic006G249000 Sobic006G249000 Sobic007G072800--Sobic006G249000 Sobic009G114600--Sobic004G074200 Sobic009G114600--Sobic010G153532 Sobic009G114600--Sobic003G060400 Sobic010G242300 Sobic010G242300 Sobic009G114600--Sobic010G242300 Sobic003G144400 Sobic003G144400 Sobic009G114600--Sobic003G144400 Sobic002G103500 Sobic002G103500 Sobic009G114600--Sobic002G103500 Sobic007G017400 Sobic007G017400 Sobic009G114600--Sobic007G017400 Sobic001G056300 Sobic001G056300 Sobic009G114600--Sobic001G056300 Sobic009G114600--Sobic006G204200 Sobic002G384200 Sobic002G384200 Sobic005G121100--Sobic002G384200 Sobic003G022800 Sobic003G022800 Sobic005G121100--Sobic003G022800 Sobic007G213600 Sobic007G213600 Sobic005G121100--Sobic007G213600 Sobic006G075801 Sobic006G075801 Sobic005G121100--Sobic006G075801 Sobic006G180600 Sobic006G180600 Sobic005G121100--Sobic006G180600 Sobic004G342900 Sobic004G342900 Sobic005G121100--Sobic004G342900 Sobic001G324900 Sobic001G324900 Sobic005G121100--Sobic001G324900 Sobic002G005700 Sobic002G005700 Sobic005G121100--Sobic002G005700 Sobic001G405900 Sobic001G405900 Sobic005G121100--Sobic001G405900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.