Gene annotation
Transcriptome id Sobic.002G056600.5
Synonym Sb02g004760
Functional annotation START domain containing protein, putative, expressed
UniProt C5XB57
Pfam PF01852
Panther DB PTHR19308 PTHR19308:SF9
NCBI CDD KOG2761; START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer
KEGG Orthology -
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT4G14500 : Polyketide cyclase/dehydrase and lipid transport superfamily protein
RAP-DB (Rice) LOC_Os07g08760.1 : START domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a056872 , Zm00025a010307 , Zm00025a036070
Brachypodium KQK20544
Barley HORVU2Hr1G058260.3 , HORVU2Hr1G058260.2
Wheat TraesCS2D02G242200 , TraesCS2B02G257400 , TraesCS2A02G237900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G237650 - -
2 Sobic.010G199800 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
3 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
4 Sobic.010G073600 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@auxin response factor, putative, expressed -
5 Sobic.005G207100 dnaJ domain containing protein, expressed -
6 Sobic.003G389800 nucleotide-sugar transporter family protein, putative, expressed -
7 Sobic.002G033600 Leucine Rich Repeat family protein, expressed -
8 Sobic.004G015800 zinc carboxypeptidase family protein, putative, expressed -
9 Sobic.005G162600 zinc knuckle domain containing protein, expressed -
10 Sobic.006G215100 expressed protein -
11 Sobic.002G392600 zinc finger CCHC domain-containing protein 10, putative, expressed -
12 Sobic.006G141800 expressed protein -
13 Sobic.003G336800 expressed protein -
14 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -
15 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
16 Sobic.007G008800 VHS and GAT domain containing protein, expressed -
17 Sobic.010G074900 G protein coupled receptor, putative, expressed -
18 Sobic.004G152000 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
19 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
20 Sobic.006G244300 expressed protein -


Gene co-expression network
sample Sobic002G056600 Sobic002G056600 Sobic010G237650 Sobic010G237650 Sobic002G056600--Sobic010G237650 Sobic010G199800 Sobic010G199800 Sobic002G056600--Sobic010G199800 Sobic001G049600 Sobic001G049600 Sobic002G056600--Sobic001G049600 Sobic010G073600 Sobic010G073600 Sobic002G056600--Sobic010G073600 Sobic005G207100 Sobic005G207100 Sobic002G056600--Sobic005G207100 Sobic003G389800 Sobic003G389800 Sobic002G056600--Sobic003G389800 Sobic002G033600 Sobic002G033600 Sobic002G056600--Sobic002G033600 Sobic004G015800 Sobic004G015800 Sobic002G056600--Sobic004G015800 Sobic005G162600 Sobic005G162600 Sobic002G056600--Sobic005G162600 Sobic010G237650--Sobic002G033600 Sobic003G092066 Sobic003G092066 Sobic010G237650--Sobic003G092066 Sobic002G268900 Sobic002G268900 Sobic010G237650--Sobic002G268900 Sobic006G144000 Sobic006G144000 Sobic010G237650--Sobic006G144000 Sobic007G139400 Sobic007G139400 Sobic010G237650--Sobic007G139400 Sobic006G215100 Sobic006G215100 Sobic010G237650--Sobic006G215100 Sobic010G237650--Sobic010G073600 Sobic005G128000 Sobic005G128000 Sobic010G237650--Sobic005G128000 Sobic009G102000 Sobic009G102000 Sobic010G237650--Sobic009G102000 Sobic002G061400 Sobic002G061400 Sobic010G199800--Sobic002G061400 Sobic003G336800 Sobic003G336800 Sobic010G199800--Sobic003G336800 Sobic010G174800 Sobic010G174800 Sobic010G199800--Sobic010G174800 Sobic006G130200 Sobic006G130200 Sobic010G199800--Sobic006G130200 Sobic001G425000 Sobic001G425000 Sobic010G199800--Sobic001G425000 Sobic002G197100 Sobic002G197100 Sobic010G199800--Sobic002G197100 Sobic004G349900 Sobic004G349900 Sobic010G199800--Sobic004G349900 Sobic006G128800 Sobic006G128800 Sobic010G199800--Sobic006G128800 Sobic001G202266 Sobic001G202266 Sobic010G199800--Sobic001G202266 Sobic004G061900 Sobic004G061900 Sobic001G049600--Sobic004G061900 Sobic004G242700 Sobic004G242700 Sobic001G049600--Sobic004G242700 Sobic001G049600--Sobic002G033600 Sobic002G076400 Sobic002G076400 Sobic001G049600--Sobic002G076400 Sobic007G188900 Sobic007G188900 Sobic001G049600--Sobic007G188900 Sobic007G191100 Sobic007G191100 Sobic001G049600--Sobic007G191100 Sobic006G092800 Sobic006G092800 Sobic001G049600--Sobic006G092800 Sobic004G030700 Sobic004G030700 Sobic001G049600--Sobic004G030700 Sobic006G262600 Sobic006G262600 Sobic001G049600--Sobic006G262600 Sobic010G073600--Sobic006G215100 Sobic010G073600--Sobic010G237650 Sobic003G229400 Sobic003G229400 Sobic010G073600--Sobic003G229400 Sobic010G073600--Sobic006G130200 Sobic004G218300 Sobic004G218300 Sobic010G073600--Sobic004G218300 Sobic010G073600--Sobic005G128000 Sobic003G289100 Sobic003G289100 Sobic010G073600--Sobic003G289100 Sobic010G073600--Sobic006G144000 Sobic003G402900 Sobic003G402900 Sobic010G073600--Sobic003G402900 Sobic003G185200 Sobic003G185200 Sobic005G207100--Sobic003G185200 Sobic004G027100 Sobic004G027100 Sobic005G207100--Sobic004G027100 Sobic010G026400 Sobic010G026400 Sobic005G207100--Sobic010G026400 Sobic005G207100--Sobic002G076400 Sobic003G012500 Sobic003G012500 Sobic005G207100--Sobic003G012500 Sobic005G207100--Sobic007G191100 Sobic007G008800 Sobic007G008800 Sobic005G207100--Sobic007G008800 Sobic001G296500 Sobic001G296500 Sobic005G207100--Sobic001G296500 Sobic005G207100--Sobic003G336800 Sobic010G217200 Sobic010G217200 Sobic003G389800--Sobic010G217200 Sobic004G013600 Sobic004G013600 Sobic003G389800--Sobic004G013600 Sobic003G389800--Sobic006G092800 Sobic010G074900 Sobic010G074900 Sobic003G389800--Sobic010G074900 Sobic001G056200 Sobic001G056200 Sobic003G389800--Sobic001G056200 Sobic003G389800--Sobic001G049600 Sobic003G389800--Sobic004G015800 Sobic006G254600 Sobic006G254600 Sobic003G389800--Sobic006G254600 Sobic003G389800--Sobic010G174800 Sobic002G033600--Sobic010G237650 Sobic002G033600--Sobic007G139400 Sobic002G033600--Sobic002G268900 Sobic002G033600--Sobic001G049600 Sobic002G033600--Sobic002G061400 Sobic002G033600--Sobic007G188900 Sobic002G033600--Sobic010G199800 Sobic002G033600--Sobic009G102000 Sobic002G334600 Sobic002G334600 Sobic002G033600--Sobic002G334600 Sobic001G235000 Sobic001G235000 Sobic004G015800--Sobic001G235000 Sobic001G408700 Sobic001G408700 Sobic004G015800--Sobic001G408700 Sobic004G007300 Sobic004G007300 Sobic004G015800--Sobic004G007300 Sobic004G015800--Sobic006G128800 Sobic004G345700 Sobic004G345700 Sobic004G015800--Sobic004G345700 Sobic004G015800--Sobic006G092800 Sobic001G514000 Sobic001G514000 Sobic004G015800--Sobic001G514000 Sobic004G015800--Sobic010G174800 Sobic006G244300 Sobic006G244300 Sobic004G015800--Sobic006G244300 Sobic001G222300 Sobic001G222300 Sobic005G162600--Sobic001G222300 Sobic008G116500 Sobic008G116500 Sobic005G162600--Sobic008G116500 Sobic008G101800 Sobic008G101800 Sobic005G162600--Sobic008G101800 Sobic001G439500 Sobic001G439500 Sobic005G162600--Sobic001G439500 Sobic003G093600 Sobic003G093600 Sobic005G162600--Sobic003G093600 Sobic005G162600--Sobic007G008800 Sobic006G129700 Sobic006G129700 Sobic005G162600--Sobic006G129700 Sobic007G037100 Sobic007G037100 Sobic005G162600--Sobic007G037100 Sobic003G204000 Sobic003G204000 Sobic005G162600--Sobic003G204000
Octagon: transcription factors


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