Gene annotation
Transcriptome id Sobic.004G050600.1
Synonym RIC10, Sb04g004320
Functional annotation P21-Rho-binding domain containing protein, putative, expressed
UniProt C5XVG4
Pfam PF00786
Panther DB PTHR23177
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33460 : ROP-interactive CRIB motif-containing protein 1
RAP-DB (Rice) LOC_Os02g06660.1 : P21-Rho-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a019042
Brachypodium KQJ93472
Barley HORVU7Hr1G058750.14 , HORVU7Hr1G058750.12 , HORVU7Hr1G058750.13 , HORVU7Hr1G058750.10 , HORVU7Hr1G058750.11 , HORVU6Hr1G026330.2 , HORVU6Hr1G026330.3 , HORVU6Hr1G026330.1 , HORVU6Hr1G026330.6 , HORVU6Hr1G026330.4 , HORVU6Hr1G026330.5 , HORVU7Hr1G058750.4 , HORVU7Hr1G058750.5 , HORVU7Hr1G058750.6 , HORVU7Hr1G058750.7 , HORVU7Hr1G058750.1 , HORVU7Hr1G058750.2 , HORVU7Hr1G058750.3 , HORVU7Hr1G058750.8 , HORVU7Hr1G058750.9
Wheat TraesCS6B02G165200 , TraesCS6D02G126000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
2 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
3 Sobic.006G235100 expressed protein -
4 Sobic.002G347500 expressed protein -
5 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
6 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
7 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
8 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
9 Sobic.006G007900 SbOMT3 is involved in the biosynthesis of the allelochemical sorgoleone. Highly expressed in rrot hairs.(PubMedID : 17998204)@"Catalyse the A ringspecific 3,5-bis-O-methylation of resveratrol, yielding pterostilbene, preference for alkylresorcinolic-type substrates"(PubMedID : 21902799)@Produced pinostilbene as the major product besides a very small amount of pterostilbene from resveratrol in E.coli.(PubMedID : 24267561)@"Methylation activity in the A ring hydroxyl group against resveratrol as well as 3,5-dihydroxy-4'-methoxystilbene"(PubMedID : 25033820)@Catalytic activity for transferring one methyl group to the hydroxyl group at the 3- or 5-position in resveratrol in E.coli. Weak activity for methylation of both hydroxyl groups to generate pterostilbene in E.coli.(PubMedID : 25715927)@O-methyltransferase, putative, expressed -
10 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
11 Sobic.001G310600 expressed protein -
12 Sobic.010G196000 DNA binding protein, putative, expressed -
13 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
14 Sobic.002G339100 similar to Putative organic cation transporter(PubMedID : 24655390)@similar to Putative organic cation transporter(PubMedID : 24655390)@organic cation transporter-related, putative, expressed -
15 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
16 Sobic.009G032700 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.003G376100 4,5-DOPA dioxygenase extradiol, putative, expressed K15777: 4,5-DOPA dioxygenase extradiol
18 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
19 Sobic.009G168900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic004G050600 Sobic004G050600 Sobic001G112100 Sobic001G112100 Sobic004G050600--Sobic001G112100 Sobic001G502400 Sobic001G502400 Sobic004G050600--Sobic001G502400 Sobic006G235100 Sobic006G235100 Sobic004G050600--Sobic006G235100 Sobic002G347500 Sobic002G347500 Sobic004G050600--Sobic002G347500 Sobic001G313600 Sobic001G313600 Sobic004G050600--Sobic001G313600 Sobic009G188000 Sobic009G188000 Sobic004G050600--Sobic009G188000 Sobic003G432700 Sobic003G432700 Sobic004G050600--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic004G050600--Sobic005G107900 Sobic006G007900 Sobic006G007900 Sobic004G050600--Sobic006G007900 Sobic001G112100--Sobic009G188000 Sobic004G295100 Sobic004G295100 Sobic001G112100--Sobic004G295100 Sobic001G304100 Sobic001G304100 Sobic001G112100--Sobic001G304100 Sobic008G009400 Sobic008G009400 Sobic001G112100--Sobic008G009400 Sobic006G172550 Sobic006G172550 Sobic001G112100--Sobic006G172550 Sobic004G297900 Sobic004G297900 Sobic001G112100--Sobic004G297900 Sobic003G299300 Sobic003G299300 Sobic001G112100--Sobic003G299300 Sobic004G292900 Sobic004G292900 Sobic001G112100--Sobic004G292900 Sobic006G235200 Sobic006G235200 Sobic001G112100--Sobic006G235200 Sobic001G502400--Sobic005G107900 Sobic001G502400--Sobic001G313600 Sobic001G502400--Sobic006G235100 Sobic001G502400--Sobic003G432700 Sobic009G184000 Sobic009G184000 Sobic001G502400--Sobic009G184000 Sobic006G075400 Sobic006G075400 Sobic001G502400--Sobic006G075400 Sobic001G502400--Sobic009G188000 Sobic005G011300 Sobic005G011300 Sobic001G502400--Sobic005G011300 Sobic001G502400--Sobic006G007900 Sobic006G235100--Sobic001G502400 Sobic006G235100--Sobic006G007900 Sobic006G235100--Sobic001G313600 Sobic006G235100--Sobic009G184000 Sobic006G235100--Sobic005G107900 Sobic003G442100 Sobic003G442100 Sobic006G235100--Sobic003G442100 Sobic004G141100 Sobic004G141100 Sobic006G235100--Sobic004G141100 Sobic006G235100--Sobic006G075400 Sobic006G235100--Sobic003G432700 Sobic003G084400 Sobic003G084400 Sobic002G347500--Sobic003G084400 Sobic005G213600 Sobic005G213600 Sobic002G347500--Sobic005G213600 Sobic006G199800 Sobic006G199800 Sobic002G347500--Sobic006G199800 Sobic003G316000 Sobic003G316000 Sobic002G347500--Sobic003G316000 Sobic004G046200 Sobic004G046200 Sobic002G347500--Sobic004G046200 Sobic002G347500--Sobic001G502400 Sobic010G259600 Sobic010G259600 Sobic002G347500--Sobic010G259600 Sobic003G053400 Sobic003G053400 Sobic002G347500--Sobic003G053400 Sobic002G347500--Sobic001G304100 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic001G313600--Sobic009G188000 Sobic001G313600--Sobic006G235100 Sobic001G313600--Sobic003G432700 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G313600--Sobic001G304100 Sobic001G313600--Sobic009G184000 Sobic009G188000--Sobic001G313600 Sobic009G188000--Sobic001G304100 Sobic009G188000--Sobic005G107900 Sobic009G188000--Sobic001G502400 Sobic001G238400 Sobic001G238400 Sobic009G188000--Sobic001G238400 Sobic009G188000--Sobic006G235100 Sobic009G188000--Sobic003G084400 Sobic009G188000--Sobic008G009400 Sobic001G295200 Sobic001G295200 Sobic009G188000--Sobic001G295200 Sobic003G432700--Sobic005G107900 Sobic003G432700--Sobic001G502400 Sobic003G228900 Sobic003G228900 Sobic003G432700--Sobic003G228900 Sobic003G432700--Sobic005G011300 Sobic003G432700--Sobic001G313600 Sobic003G432700--Sobic009G184000 Sobic003G432700--Sobic006G075400 Sobic001G169500 Sobic001G169500 Sobic003G432700--Sobic001G169500 Sobic007G169700 Sobic007G169700 Sobic003G432700--Sobic007G169700 Sobic005G107900--Sobic001G502400 Sobic005G107900--Sobic001G313600 Sobic005G107900--Sobic003G432700 Sobic005G107900--Sobic005G011300 Sobic005G107900--Sobic006G235100 Sobic005G107900--Sobic006G075400 Sobic005G107900--Sobic009G184000 Sobic005G107900--Sobic009G188000 Sobic005G107900--Sobic001G169500 Sobic006G007900--Sobic006G235100 Sobic001G259400 Sobic001G259400 Sobic006G007900--Sobic001G259400 Sobic006G007900--Sobic003G442100 Sobic006G007900--Sobic009G184000 Sobic007G122800 Sobic007G122800 Sobic006G007900--Sobic007G122800 Sobic001G259900 Sobic001G259900 Sobic006G007900--Sobic001G259900 Sobic008G066401 Sobic008G066401 Sobic006G007900--Sobic008G066401 Sobic006G007900--Sobic001G502400 Sobic005G086600 Sobic005G086600 Sobic006G007900--Sobic005G086600
Octagon: transcription factors


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