Gene annotation
Transcriptome id Sobic.004G118400.1
Synonym TRP6, Sb04g009870, PAI1
Functional annotation tryptophan biosynthesis protein trpCF, putative, expressed
UniProt C5XZK5
Pfam PF00697
Panther DB PTHR22854 PTHR22854:SF12
NCBI CDD KOG4202; Phosphoribosylanthranilate isomerase
KEGG Orthology K01817; phosphoribosylanthranilate isomerase
Gene Ontology GO:0006568; tryptophan metabolic process GO:0004640phosphoribosylanthranilate isomerase activity


Orthologs (automatic annotation)
TAIR AT1G07780 : phosphoribosylanthranilate isomerase 1
RAP-DB (Rice) LOC_Os02g16630.1 : tryptophan biosynthesis protein trpCF, putative, expressed
MaizeGDB (Corn) Zm00025a034403
Brachypodium KQJ86188
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
2 Sobic.008G021400 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
3 Sobic.003G150500 uncharacterized aarF domain-containing protein kinase 4, putative, expressed K08869: ADCK, aarF domain-containing kinase
4 Sobic.007G182000 hydroxymethylglutaryl-CoA synthase("PubMedID : 26759170,PubMedID : 24597475")@hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
5 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
6 Sobic.002G043800 regulator of chromosome condensation/beta-lactamase-inhibitor protein II, putative, expressed -
7 Sobic.001G411200 cat eye syndrome critical region protein 5 precursor, putative, expressed -
8 Sobic.001G342900 ubiquinone biosynthesis protein COQ9, mitochondrial precursor, putative, expressed K18587: ubiquinone biosynthesis protein COQ9
9 Sobic.003G010800 C4-dicarboxylate transporter/malic acid transport protein, expressed -
10 Sobic.003G213400 expressed protein -
11 Sobic.002G407000 4-alpha-glucanotransferase, putative, expressed K00705: 4-alpha-glucanotransferase
12 Sobic.002G307800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K01931: protein neuralized
13 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
14 Sobic.007G069101 - -
15 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
16 Sobic.008G029600 - -
17 Sobic.008G029700 - -
18 Sobic.001G292900 expressed protein -
19 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
20 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase


Gene co-expression network
sample Sobic004G118400 Sobic004G118400 Sobic010G134000 Sobic010G134000 Sobic004G118400--Sobic010G134000 Sobic008G021400 Sobic008G021400 Sobic004G118400--Sobic008G021400 Sobic003G150500 Sobic003G150500 Sobic004G118400--Sobic003G150500 Sobic007G182000 Sobic007G182000 Sobic004G118400--Sobic007G182000 Sobic006G250800 Sobic006G250800 Sobic004G118400--Sobic006G250800 Sobic002G043800 Sobic002G043800 Sobic004G118400--Sobic002G043800 Sobic001G411200 Sobic001G411200 Sobic004G118400--Sobic001G411200 Sobic001G342900 Sobic001G342900 Sobic004G118400--Sobic001G342900 Sobic003G010800 Sobic003G010800 Sobic004G118400--Sobic003G010800 Sobic010G134000--Sobic003G010800 Sobic003G433400 Sobic003G433400 Sobic010G134000--Sobic003G433400 Sobic003G403300 Sobic003G403300 Sobic010G134000--Sobic003G403300 Sobic002G310900 Sobic002G310900 Sobic010G134000--Sobic002G310900 Sobic002G407000 Sobic002G407000 Sobic010G134000--Sobic002G407000 Sobic010G134000--Sobic001G411200 Sobic003G291800 Sobic003G291800 Sobic010G134000--Sobic003G291800 Sobic001G178100 Sobic001G178100 Sobic010G134000--Sobic001G178100 Sobic006G270000 Sobic006G270000 Sobic010G134000--Sobic006G270000 Sobic010G273300 Sobic010G273300 Sobic008G021400--Sobic010G273300 Sobic001G292900 Sobic001G292900 Sobic008G021400--Sobic001G292900 Sobic001G340000 Sobic001G340000 Sobic008G021400--Sobic001G340000 Sobic008G044900 Sobic008G044900 Sobic008G021400--Sobic008G044900 Sobic002G031900 Sobic002G031900 Sobic008G021400--Sobic002G031900 Sobic010G121100 Sobic010G121100 Sobic008G021400--Sobic010G121100 Sobic009G217400 Sobic009G217400 Sobic008G021400--Sobic009G217400 Sobic005G145550 Sobic005G145550 Sobic008G021400--Sobic005G145550 Sobic001G475200 Sobic001G475200 Sobic008G021400--Sobic001G475200 Sobic003G150500--Sobic002G043800 Sobic003G298200 Sobic003G298200 Sobic003G150500--Sobic003G298200 Sobic003G107500 Sobic003G107500 Sobic003G150500--Sobic003G107500 Sobic010G150100 Sobic010G150100 Sobic003G150500--Sobic010G150100 Sobic001G282800 Sobic001G282800 Sobic003G150500--Sobic001G282800 Sobic003G150500--Sobic001G411200 Sobic005G176100 Sobic005G176100 Sobic003G150500--Sobic005G176100 Sobic004G151300 Sobic004G151300 Sobic003G150500--Sobic004G151300 Sobic004G086300 Sobic004G086300 Sobic003G150500--Sobic004G086300 Sobic007G182000--Sobic009G217400 Sobic003G365100 Sobic003G365100 Sobic007G182000--Sobic003G365100 Sobic001G253300 Sobic001G253300 Sobic007G182000--Sobic001G253300 Sobic007G182000--Sobic006G250800 Sobic007G087000 Sobic007G087000 Sobic007G182000--Sobic007G087000 Sobic002G057400 Sobic002G057400 Sobic007G182000--Sobic002G057400 Sobic007G182000--Sobic003G433400 Sobic003G243800 Sobic003G243800 Sobic007G182000--Sobic003G243800 Sobic001G257800 Sobic001G257800 Sobic007G182000--Sobic001G257800 Sobic002G079000 Sobic002G079000 Sobic006G250800--Sobic002G079000 Sobic001G188400 Sobic001G188400 Sobic006G250800--Sobic001G188400 Sobic006G250800--Sobic009G217400 Sobic003G316200 Sobic003G316200 Sobic006G250800--Sobic003G316200 Sobic002G084800 Sobic002G084800 Sobic006G250800--Sobic002G084800 Sobic009G116900 Sobic009G116900 Sobic006G250800--Sobic009G116900 Sobic006G250800--Sobic007G087000 Sobic006G250800--Sobic001G253300 Sobic002G306100 Sobic002G306100 Sobic006G250800--Sobic002G306100 Sobic002G043800--Sobic010G150100 Sobic002G043800--Sobic003G107500 Sobic004G146600 Sobic004G146600 Sobic002G043800--Sobic004G146600 Sobic008G167600 Sobic008G167600 Sobic002G043800--Sobic008G167600 Sobic002G043800--Sobic004G151300 Sobic002G043800--Sobic003G150500 Sobic004G312600 Sobic004G312600 Sobic002G043800--Sobic004G312600 Sobic003G271400 Sobic003G271400 Sobic002G043800--Sobic003G271400 Sobic002G295100 Sobic002G295100 Sobic002G043800--Sobic002G295100 Sobic001G411200--Sobic002G407000 Sobic004G151800 Sobic004G151800 Sobic001G411200--Sobic004G151800 Sobic001G411200--Sobic004G151300 Sobic001G345100 Sobic001G345100 Sobic001G411200--Sobic001G345100 Sobic001G411200--Sobic003G150500 Sobic002G252300 Sobic002G252300 Sobic001G411200--Sobic002G252300 Sobic001G411200--Sobic010G150100 Sobic001G411200--Sobic010G134000 Sobic004G143300 Sobic004G143300 Sobic001G411200--Sobic004G143300 Sobic001G342900--Sobic006G250800 Sobic001G342900--Sobic009G116900 Sobic001G404900 Sobic001G404900 Sobic001G342900--Sobic001G404900 Sobic004G290100 Sobic004G290100 Sobic001G342900--Sobic004G290100 Sobic001G342900--Sobic002G306100 Sobic003G193500 Sobic003G193500 Sobic001G342900--Sobic003G193500 Sobic009G128500 Sobic009G128500 Sobic001G342900--Sobic009G128500 Sobic001G342900--Sobic007G087000 Sobic003G235100 Sobic003G235100 Sobic001G342900--Sobic003G235100 Sobic003G010800--Sobic010G134000 Sobic003G010800--Sobic006G270000 Sobic003G010800--Sobic002G310900 Sobic003G010800--Sobic003G433400 Sobic003G010800--Sobic003G403300 Sobic010G149800 Sobic010G149800 Sobic003G010800--Sobic010G149800 Sobic010G105000 Sobic010G105000 Sobic003G010800--Sobic010G105000 Sobic003G010800--Sobic003G291800 Sobic002G307800 Sobic002G307800 Sobic003G010800--Sobic002G307800
Octagon: transcription factors


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