Gene annotation
Transcriptome id Sobic.004G152800.1
Synonym Sb04g020450
Functional annotation 3-oxoacyl-reductase, chloroplast precursor, putative, expressed
UniProt C5XSJ4
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF619
NCBI CDD KOG1200; Mitochondrial/plastidial beta-ketoacyl-ACP reductase
KEGG Orthology K00059; fabG, 3-oxoacyl-[acyl-carrier protein] reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24360 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os04g30760.1 : 3-oxoacyl-reductase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020384
Brachypodium KQJ99551
Barley HORVU2Hr1G068270.9 , HORVU2Hr1G068270.8 , HORVU2Hr1G068270.11 , HORVU2Hr1G068270.10 , HORVU2Hr1G068270.5 , HORVU2Hr1G068270.4 , HORVU2Hr1G068270.7 , HORVU2Hr1G068270.6 , HORVU2Hr1G068270.1 , HORVU2Hr1G068270.3 , HORVU2Hr1G068270.2
Wheat TraesCS2A02G278900 , TraesCS2A02G278900 , TraesCS2B02G296500 , TraesCS2D02G278000 , TraesCS2D02G278000
Populus -


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cDNA sequences
Sobic.004G152800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G301100 PQ loop repeat domain containing protein, expressed K09660: mannose-P-dolichol utilization defect 1
2 Sobic.003G113300 expressed protein -
3 Sobic.001G498800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
4 Sobic.002G386600 heat shock protein DnaJ, putative, expressed -
5 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
6 Sobic.009G254100 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
7 Sobic.001G229300 expressed protein -
8 Sobic.006G012300 3-5 exonuclease domain-containing protein, putative, expressed -
9 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
10 Sobic.004G194100 expressed protein -
11 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
12 Sobic.007G119700 OsFBX8 - F-box domain containing protein, expressed -
13 Sobic.006G220400 exonuclease, putative, expressed -
14 Sobic.002G398500 Mo25, putative, expressed K08272: CAB39, calcium binding protein 39
15 Sobic.003G291900 expressed protein -
16 Sobic.009G154900 tubulin/FtsZ domain containing protein, putative, expressed K03531: cell division protein FtsZ
17 Sobic.001G043200 expressed protein -
18 Sobic.003G256800 RNA polymerase III subunit RPC82 family protein, putative, expressed K03023: RPC3, DNA-directed RNA polymerase III subunit RPC3
19 Sobic.001G340300 tentative name(PubMedID : 31536532)@expressed protein -
20 Sobic.009G260700 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor


Gene co-expression network
sample Sobic004G152800 Sobic004G152800 Sobic002G301100 Sobic002G301100 Sobic004G152800--Sobic002G301100 Sobic003G113300 Sobic003G113300 Sobic004G152800--Sobic003G113300 Sobic001G498800 Sobic001G498800 Sobic004G152800--Sobic001G498800 Sobic002G386600 Sobic002G386600 Sobic004G152800--Sobic002G386600 Sobic006G106300 Sobic006G106300 Sobic004G152800--Sobic006G106300 Sobic009G254100 Sobic009G254100 Sobic004G152800--Sobic009G254100 Sobic001G229300 Sobic001G229300 Sobic004G152800--Sobic001G229300 Sobic006G012300 Sobic006G012300 Sobic004G152800--Sobic006G012300 Sobic001G474400 Sobic001G474400 Sobic004G152800--Sobic001G474400 Sobic002G301100--Sobic006G106300 Sobic002G301100--Sobic001G474400 Sobic006G203300 Sobic006G203300 Sobic002G301100--Sobic006G203300 Sobic005G090300 Sobic005G090300 Sobic002G301100--Sobic005G090300 Sobic006G260500 Sobic006G260500 Sobic002G301100--Sobic006G260500 Sobic001G399700 Sobic001G399700 Sobic002G301100--Sobic001G399700 Sobic004G096700 Sobic004G096700 Sobic002G301100--Sobic004G096700 Sobic001G205100 Sobic001G205100 Sobic002G301100--Sobic001G205100 Sobic007G173700 Sobic007G173700 Sobic002G301100--Sobic007G173700 Sobic009G122500 Sobic009G122500 Sobic003G113300--Sobic009G122500 Sobic002G296400 Sobic002G296400 Sobic003G113300--Sobic002G296400 Sobic002G014800 Sobic002G014800 Sobic003G113300--Sobic002G014800 Sobic003G113300--Sobic001G474400 Sobic001G030000 Sobic001G030000 Sobic003G113300--Sobic001G030000 Sobic005G114500 Sobic005G114500 Sobic003G113300--Sobic005G114500 Sobic007G030100 Sobic007G030100 Sobic003G113300--Sobic007G030100 Sobic003G393200 Sobic003G393200 Sobic003G113300--Sobic003G393200 Sobic001G051400 Sobic001G051400 Sobic003G113300--Sobic001G051400 Sobic003G021600 Sobic003G021600 Sobic001G498800--Sobic003G021600 Sobic006G060000 Sobic006G060000 Sobic001G498800--Sobic006G060000 Sobic006G191000 Sobic006G191000 Sobic001G498800--Sobic006G191000 Sobic003G394500 Sobic003G394500 Sobic001G498800--Sobic003G394500 Sobic001G043200 Sobic001G043200 Sobic001G498800--Sobic001G043200 Sobic008G152700 Sobic008G152700 Sobic001G498800--Sobic008G152700 Sobic008G095900 Sobic008G095900 Sobic001G498800--Sobic008G095900 Sobic001G378800 Sobic001G378800 Sobic001G498800--Sobic001G378800 Sobic010G277700 Sobic010G277700 Sobic001G498800--Sobic010G277700 Sobic002G386900 Sobic002G386900 Sobic002G386600--Sobic002G386900 Sobic006G029100 Sobic006G029100 Sobic002G386600--Sobic006G029100 Sobic004G141800 Sobic004G141800 Sobic002G386600--Sobic004G141800 Sobic006G265600 Sobic006G265600 Sobic002G386600--Sobic006G265600 Sobic002G398700 Sobic002G398700 Sobic002G386600--Sobic002G398700 Sobic002G160700 Sobic002G160700 Sobic002G386600--Sobic002G160700 Sobic001G085800 Sobic001G085800 Sobic002G386600--Sobic001G085800 Sobic003G397900 Sobic003G397900 Sobic002G386600--Sobic003G397900 Sobic003G246000 Sobic003G246000 Sobic002G386600--Sobic003G246000 Sobic003G409900 Sobic003G409900 Sobic006G106300--Sobic003G409900 Sobic006G106300--Sobic003G021600 Sobic006G106300--Sobic002G398700 Sobic001G097900 Sobic001G097900 Sobic006G106300--Sobic001G097900 Sobic001G015400 Sobic001G015400 Sobic006G106300--Sobic001G015400 Sobic006G106300--Sobic009G254100 Sobic006G106300--Sobic002G301100 Sobic006G106300--Sobic001G474400 Sobic002G364900 Sobic002G364900 Sobic006G106300--Sobic002G364900 Sobic009G254100--Sobic006G106300 Sobic003G256800 Sobic003G256800 Sobic009G254100--Sobic003G256800 Sobic006G178100 Sobic006G178100 Sobic009G254100--Sobic006G178100 Sobic003G143800 Sobic003G143800 Sobic009G254100--Sobic003G143800 Sobic002G381900 Sobic002G381900 Sobic009G254100--Sobic002G381900 Sobic009G254100--Sobic001G097900 Sobic009G254100--Sobic002G398700 Sobic005G026400 Sobic005G026400 Sobic009G254100--Sobic005G026400 Sobic003G146600 Sobic003G146600 Sobic009G254100--Sobic003G146600 Sobic001G123600 Sobic001G123600 Sobic001G229300--Sobic001G123600 Sobic003G129300 Sobic003G129300 Sobic001G229300--Sobic003G129300 Sobic004G354100 Sobic004G354100 Sobic001G229300--Sobic004G354100 Sobic004G256300 Sobic004G256300 Sobic001G229300--Sobic004G256300 Sobic003G010900 Sobic003G010900 Sobic001G229300--Sobic003G010900 Sobic002G066800 Sobic002G066800 Sobic001G229300--Sobic002G066800 Sobic003G222700 Sobic003G222700 Sobic001G229300--Sobic003G222700 Sobic002G142700 Sobic002G142700 Sobic001G229300--Sobic002G142700 Sobic006G106600 Sobic006G106600 Sobic001G229300--Sobic006G106600 Sobic009G040250 Sobic009G040250 Sobic006G012300--Sobic009G040250 Sobic007G105700 Sobic007G105700 Sobic006G012300--Sobic007G105700 Sobic003G420400 Sobic003G420400 Sobic006G012300--Sobic003G420400 Sobic006G119900 Sobic006G119900 Sobic006G012300--Sobic006G119900 Sobic010G274800 Sobic010G274800 Sobic006G012300--Sobic010G274800 Sobic009G040325 Sobic009G040325 Sobic006G012300--Sobic009G040325 Sobic002G392400 Sobic002G392400 Sobic006G012300--Sobic002G392400 Sobic006G220400 Sobic006G220400 Sobic006G012300--Sobic006G220400 Sobic005G087300 Sobic005G087300 Sobic006G012300--Sobic005G087300 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G474400--Sobic001G097900 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic010G223400 Sobic010G223400 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic001G474400--Sobic006G265600
Octagon: transcription factors


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