Gene annotation
Transcriptome id Sobic.004G160200.2,Sobic.004G160200.1
Synonym Sb04g021230
Functional annotation DUF803 domain containing, putative, expressed
UniProt A0A194YQ03 , C5XTA1
Pfam PF05653
Panther DB PTHR12570 PTHR12570:SF9
NCBI CDD KOG2922; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT3G26670 : Protein of unknown function (DUF803)
RAP-DB (Rice) LOC_Os02g31874.1 : DUF803 domain containing, putative, expressed
MaizeGDB (Corn) Zm00025a031322 , Zm00025a020488 , Zm00025a008512
Brachypodium PNT68725 , KQJ99659 , KQJ99658
Barley HORVU6Hr1G046910.23 , HORVU6Hr1G046910.22 , HORVU6Hr1G046910.21 , HORVU6Hr1G046910.20 , HORVU6Hr1G046910.24 , HORVU6Hr1G046910.18 , HORVU6Hr1G046910.19 , HORVU6Hr1G046910.12 , HORVU6Hr1G046910.13 , HORVU6Hr1G046910.10 , HORVU6Hr1G046910.11 , HORVU6Hr1G046910.16 , HORVU6Hr1G046910.17 , HORVU6Hr1G046910.14 , HORVU6Hr1G046910.15 , HORVU6Hr1G046910.1 , HORVU6Hr1G046910.2 , HORVU6Hr1G046910.3 , HORVU6Hr1G046910.4 , HORVU6Hr1G046910.5 , HORVU6Hr1G046910.6 , HORVU6Hr1G046910.7 , HORVU6Hr1G046910.8 , HORVU6Hr1G046910.9
Wheat TraesCS6B02G220700 , TraesCS6B02G220700 , TraesCS6B02G220700 , TraesCS6B02G220700 , TraesCS6B02G220700 , TraesCS6B02G220700 , TraesCS6B02G220700 , TraesCS6B02G220700 , TraesCS6D02G182700 , TraesCS6D02G182700 , TraesCS6D02G182700 , TraesCS6D02G182700 , TraesCS6D02G182700 , TraesCS6D02G182700 , TraesCS6A02G194800 , TraesCS6A02G194800 , TraesCS6A02G194800 , TraesCS6A02G194800 , TraesCS6A02G194800 , TraesCS6A02G194800 , TraesCS6A02G194800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
2 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
3 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
4 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
5 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
6 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
7 Sobic.009G067000 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
8 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
9 Sobic.003G134800 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
10 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
11 Sobic.003G161600 dephospho-CoA kinase, putative, expressed K00859: dephospho-CoA kinase
12 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
13 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
14 Sobic.001G444300 expressed protein -
15 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
17 Sobic.002G141700 unc-50, putative, expressed -
18 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
19 Sobic.001G109300 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
20 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -


Gene co-expression network
sample Sobic004G160200 Sobic004G160200 Sobic003G348800 Sobic003G348800 Sobic004G160200--Sobic003G348800 Sobic004G082900 Sobic004G082900 Sobic004G160200--Sobic004G082900 Sobic001G283200 Sobic001G283200 Sobic004G160200--Sobic001G283200 Sobic004G010900 Sobic004G010900 Sobic004G160200--Sobic004G010900 Sobic006G252200 Sobic006G252200 Sobic004G160200--Sobic006G252200 Sobic001G281900 Sobic001G281900 Sobic004G160200--Sobic001G281900 Sobic009G067000 Sobic009G067000 Sobic004G160200--Sobic009G067000 Sobic001G145500 Sobic001G145500 Sobic004G160200--Sobic001G145500 Sobic003G134800 Sobic003G134800 Sobic004G160200--Sobic003G134800 Sobic001G338400 Sobic001G338400 Sobic003G348800--Sobic001G338400 Sobic003G348800--Sobic001G281900 Sobic002G342500 Sobic002G342500 Sobic003G348800--Sobic002G342500 Sobic001G230100 Sobic001G230100 Sobic003G348800--Sobic001G230100 Sobic001G220900 Sobic001G220900 Sobic003G348800--Sobic001G220900 Sobic003G348800--Sobic004G160200 Sobic001G109300 Sobic001G109300 Sobic003G348800--Sobic001G109300 Sobic004G257000 Sobic004G257000 Sobic003G348800--Sobic004G257000 Sobic008G150300 Sobic008G150300 Sobic003G348800--Sobic008G150300 Sobic004G082900--Sobic006G252200 Sobic004G082900--Sobic001G283200 Sobic001G458700 Sobic001G458700 Sobic004G082900--Sobic001G458700 Sobic004G082900--Sobic004G010900 Sobic007G176200 Sobic007G176200 Sobic004G082900--Sobic007G176200 Sobic005G105500 Sobic005G105500 Sobic004G082900--Sobic005G105500 Sobic004G082900--Sobic001G145500 Sobic009G149500 Sobic009G149500 Sobic004G082900--Sobic009G149500 Sobic001G444300 Sobic001G444300 Sobic004G082900--Sobic001G444300 Sobic001G283200--Sobic001G458700 Sobic003G261400 Sobic003G261400 Sobic001G283200--Sobic003G261400 Sobic001G283200--Sobic006G252200 Sobic001G033500 Sobic001G033500 Sobic001G283200--Sobic001G033500 Sobic004G348900 Sobic004G348900 Sobic001G283200--Sobic004G348900 Sobic004G181900 Sobic004G181900 Sobic001G283200--Sobic004G181900 Sobic003G349300 Sobic003G349300 Sobic001G283200--Sobic003G349300 Sobic001G283200--Sobic007G176200 Sobic001G283200--Sobic004G082900 Sobic001G206900 Sobic001G206900 Sobic004G010900--Sobic001G206900 Sobic004G010900--Sobic001G458700 Sobic004G010900--Sobic004G082900 Sobic004G010900--Sobic006G252200 Sobic010G205300 Sobic010G205300 Sobic004G010900--Sobic010G205300 Sobic004G010900--Sobic003G261400 Sobic004G010900--Sobic001G338400 Sobic004G010900--Sobic001G283200 Sobic004G010900--Sobic003G349300 Sobic006G252200--Sobic007G176200 Sobic006G252200--Sobic001G458700 Sobic004G224900 Sobic004G224900 Sobic006G252200--Sobic004G224900 Sobic001G010700 Sobic001G010700 Sobic006G252200--Sobic001G010700 Sobic003G330500 Sobic003G330500 Sobic006G252200--Sobic003G330500 Sobic002G428200 Sobic002G428200 Sobic006G252200--Sobic002G428200 Sobic004G138800 Sobic004G138800 Sobic006G252200--Sobic004G138800 Sobic006G252200--Sobic001G283200 Sobic001G096100 Sobic001G096100 Sobic006G252200--Sobic001G096100 Sobic001G281900--Sobic003G330500 Sobic001G281900--Sobic005G105500 Sobic001G281900--Sobic008G150300 Sobic001G281900--Sobic006G252200 Sobic001G196100 Sobic001G196100 Sobic001G281900--Sobic001G196100 Sobic001G281900--Sobic001G458700 Sobic001G281900--Sobic007G176200 Sobic001G281900--Sobic001G338400 Sobic001G281900--Sobic001G096100 Sobic009G067000--Sobic007G176200 Sobic009G067000--Sobic006G252200 Sobic009G067000--Sobic001G458700 Sobic001G007600 Sobic001G007600 Sobic009G067000--Sobic001G007600 Sobic009G067000--Sobic002G428200 Sobic009G067000--Sobic001G010700 Sobic007G114200 Sobic007G114200 Sobic009G067000--Sobic007G114200 Sobic009G067000--Sobic004G224900 Sobic009G067000--Sobic001G283200 Sobic001G145500--Sobic001G444300 Sobic001G145500--Sobic005G105500 Sobic001G145500--Sobic001G338400 Sobic001G145500--Sobic001G281900 Sobic001G145500--Sobic007G176200 Sobic001G145500--Sobic004G010900 Sobic001G145500--Sobic006G252200 Sobic001G145500--Sobic003G330500 Sobic002G029300 Sobic002G029300 Sobic001G145500--Sobic002G029300 Sobic002G070600 Sobic002G070600 Sobic003G134800--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic003G134800--Sobic008G072200 Sobic002G141700 Sobic002G141700 Sobic003G134800--Sobic002G141700 Sobic010G178600 Sobic010G178600 Sobic003G134800--Sobic010G178600 Sobic001G117800 Sobic001G117800 Sobic003G134800--Sobic001G117800 Sobic002G423500 Sobic002G423500 Sobic003G134800--Sobic002G423500 Sobic003G134800--Sobic001G220900 Sobic001G151600 Sobic001G151600 Sobic003G134800--Sobic001G151600 Sobic003G143700 Sobic003G143700 Sobic003G134800--Sobic003G143700
Octagon: transcription factors


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