Gene annotation
Transcriptome id Sobic.004G174800.1,Sobic.004G174800.2
Synonym Sb04g022510, OTP81
Functional annotation expressed protein
UniProt C5XU74
Pfam PF14432 PF13041 PF01535
Panther DB PTHR24015 PTHR24015:SF876
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G29760 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os02g34700.1 : expressed protein
MaizeGDB (Corn) Zm00025a020631
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G119100 tetratricopeptide-like helical, putative, expressed -
2 Sobic.001G450300 PPR repeat containing protein, putative, expressed -
3 Sobic.008G009000 pentatricopeptide, putative, expressed -
4 Sobic.004G217900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
5 Sobic.008G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
6 Sobic.005G210700 pentatricopeptide repeat domain containing protein, putative, expressed -
7 Sobic.004G346200 tetratricopeptide-like helical, putative, expressed -
8 Sobic.008G082800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.008G170600 pentatricopeptide, putative, expressed -
10 Sobic.008G031200 pentatricopeptide, putative, expressed -
11 Sobic.005G208950 - -
12 Sobic.006G085900 pentatricopeptide, putative, expressed -
13 Sobic.002G172500 tetratricopeptide-like helical, putative, expressed -
14 Sobic.002G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat domain containing protein, putative, expressed -
15 Sobic.003G009400 - -
16 Sobic.001G149100 vegetative storage protein, putative, expressed -
17 Sobic.003G239000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
18 Sobic.009G116400 pentatricopeptide, putative, expressed -
19 Sobic.003G203100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
20 Sobic.009G155400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic004G174800 Sobic004G174800 Sobic003G119100 Sobic003G119100 Sobic004G174800--Sobic003G119100 Sobic001G450300 Sobic001G450300 Sobic004G174800--Sobic001G450300 Sobic008G009000 Sobic008G009000 Sobic004G174800--Sobic008G009000 Sobic004G217900 Sobic004G217900 Sobic004G174800--Sobic004G217900 Sobic008G099900 Sobic008G099900 Sobic004G174800--Sobic008G099900 Sobic005G210700 Sobic005G210700 Sobic004G174800--Sobic005G210700 Sobic004G346200 Sobic004G346200 Sobic004G174800--Sobic004G346200 Sobic008G082800 Sobic008G082800 Sobic004G174800--Sobic008G082800 Sobic008G170600 Sobic008G170600 Sobic004G174800--Sobic008G170600 Sobic003G119100--Sobic004G174800 Sobic003G119100--Sobic008G082800 Sobic007G208400 Sobic007G208400 Sobic003G119100--Sobic007G208400 Sobic009G251600 Sobic009G251600 Sobic003G119100--Sobic009G251600 Sobic009G076900 Sobic009G076900 Sobic003G119100--Sobic009G076900 Sobic003G119100--Sobic004G346200 Sobic003G119100--Sobic001G450300 Sobic002G057050 Sobic002G057050 Sobic003G119100--Sobic002G057050 Sobic009G063450 Sobic009G063450 Sobic003G119100--Sobic009G063450 Sobic001G450300--Sobic004G174800 Sobic003G277100 Sobic003G277100 Sobic001G450300--Sobic003G277100 Sobic008G012700 Sobic008G012700 Sobic001G450300--Sobic008G012700 Sobic008G007300 Sobic008G007300 Sobic001G450300--Sobic008G007300 Sobic004G159600 Sobic004G159600 Sobic001G450300--Sobic004G159600 Sobic002G244700 Sobic002G244700 Sobic001G450300--Sobic002G244700 Sobic006G212500 Sobic006G212500 Sobic001G450300--Sobic006G212500 Sobic003G009400 Sobic003G009400 Sobic001G450300--Sobic003G009400 Sobic007G199300 Sobic007G199300 Sobic001G450300--Sobic007G199300 Sobic008G179000 Sobic008G179000 Sobic008G009000--Sobic008G179000 Sobic003G239000 Sobic003G239000 Sobic008G009000--Sobic003G239000 Sobic001G149100 Sobic001G149100 Sobic008G009000--Sobic001G149100 Sobic008G163400 Sobic008G163400 Sobic008G009000--Sobic008G163400 Sobic002G267600 Sobic002G267600 Sobic008G009000--Sobic002G267600 Sobic004G241000 Sobic004G241000 Sobic008G009000--Sobic004G241000 Sobic004G256900 Sobic004G256900 Sobic008G009000--Sobic004G256900 Sobic010G252700 Sobic010G252700 Sobic008G009000--Sobic010G252700 Sobic003G142400 Sobic003G142400 Sobic008G009000--Sobic003G142400 Sobic009G155400 Sobic009G155400 Sobic004G217900--Sobic009G155400 Sobic004G217900--Sobic008G163400 Sobic009G116400 Sobic009G116400 Sobic004G217900--Sobic009G116400 Sobic001G187800 Sobic001G187800 Sobic004G217900--Sobic001G187800 Sobic004G217900--Sobic008G099900 Sobic003G051500 Sobic003G051500 Sobic004G217900--Sobic003G051500 Sobic004G217900--Sobic004G241000 Sobic010G190900 Sobic010G190900 Sobic004G217900--Sobic010G190900 Sobic004G217900--Sobic001G149100 Sobic008G099900--Sobic005G210700 Sobic006G085900 Sobic006G085900 Sobic008G099900--Sobic006G085900 Sobic008G099900--Sobic009G155400 Sobic002G251800 Sobic002G251800 Sobic008G099900--Sobic002G251800 Sobic008G099900--Sobic004G217900 Sobic006G109400 Sobic006G109400 Sobic008G099900--Sobic006G109400 Sobic008G099900--Sobic009G116400 Sobic007G179600 Sobic007G179600 Sobic008G099900--Sobic007G179600 Sobic006G271900 Sobic006G271900 Sobic008G099900--Sobic006G271900 Sobic005G210700--Sobic008G099900 Sobic005G210700--Sobic009G155400 Sobic005G210700--Sobic009G116400 Sobic005G210700--Sobic006G085900 Sobic005G210700--Sobic007G179600 Sobic001G347100 Sobic001G347100 Sobic005G210700--Sobic001G347100 Sobic008G066900 Sobic008G066900 Sobic005G210700--Sobic008G066900 Sobic006G069100 Sobic006G069100 Sobic005G210700--Sobic006G069100 Sobic005G011000 Sobic005G011000 Sobic005G210700--Sobic005G011000 Sobic004G346200--Sobic009G116400 Sobic004G346200--Sobic006G085900 Sobic004G346200--Sobic009G155400 Sobic007G087900 Sobic007G087900 Sobic004G346200--Sobic007G087900 Sobic004G346200--Sobic008G082800 Sobic004G346200--Sobic010G190900 Sobic004G346200--Sobic005G210700 Sobic006G033380 Sobic006G033380 Sobic004G346200--Sobic006G033380 Sobic006G262700 Sobic006G262700 Sobic004G346200--Sobic006G262700 Sobic002G172500 Sobic002G172500 Sobic008G082800--Sobic002G172500 Sobic008G082800--Sobic004G256900 Sobic001G478900 Sobic001G478900 Sobic008G082800--Sobic001G478900 Sobic003G184300 Sobic003G184300 Sobic008G082800--Sobic003G184300 Sobic010G068900 Sobic010G068900 Sobic008G082800--Sobic010G068900 Sobic008G082800--Sobic009G155400 Sobic008G082800--Sobic006G085900 Sobic009G063500 Sobic009G063500 Sobic008G082800--Sobic009G063500 Sobic006G262800 Sobic006G262800 Sobic008G082800--Sobic006G262800 Sobic008G170600--Sobic006G085900 Sobic008G170600--Sobic008G099900 Sobic002G084400 Sobic002G084400 Sobic008G170600--Sobic002G084400 Sobic008G170600--Sobic002G251800 Sobic008G170600--Sobic010G068900 Sobic004G282500 Sobic004G282500 Sobic008G170600--Sobic004G282500 Sobic008G170600--Sobic002G172500 Sobic008G170600--Sobic004G241000 Sobic008G031200 Sobic008G031200 Sobic008G170600--Sobic008G031200
Octagon: transcription factors


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