Gene annotation
Transcriptome id Sobic.004G188500.2,Sobic.004G188500.1
Synonym Sb04g023690
Functional annotation nucleotide-sugar transporter family protein, putative, expressed
UniProt A0A1Z5RNQ4 , C5XVN0
Pfam PF04142 PF16913
Panther DB PTHR10231 PTHR10231:SF3
NCBI CDD KOG2234; Predicted UDP-galactose transporter
KEGG Orthology K15272; solute carrier family 35 (UDP-sugar transporter), member A1/2/3
Gene Ontology GO:0016021; integral component of membrane GO:0008643carbohydrate transport GO:0005351carbohydrate:proton symporter activity GO:0000139Golgi membrane


Orthologs (automatic annotation)
TAIR AT5G65000 : Nucleotide-sugar transporter family protein
RAP-DB (Rice) LOC_Os02g36390.4 : nucleotide-sugar transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a031703 , Zm00025a020784
Brachypodium KQJ99996 , PNT68881
Barley HORVU6Hr1G049910.8 , HORVU6Hr1G049910.1 , HORVU6Hr1G049910.3 , HORVU6Hr1G049910.2 , HORVU6Hr1G049910.5 , HORVU6Hr1G049910.4 , HORVU6Hr1G049910.7 , HORVU6Hr1G049910.6
Wheat TraesCS6A02G203400 , TraesCS6A02G203400 , TraesCS6A02G203400 , TraesCS6B02G224000 , TraesCS6D02G187100 , TraesCS6D02G187100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G102750 - -
2 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
3 Sobic.008G021400 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
4 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
5 Sobic.007G182000 hydroxymethylglutaryl-CoA synthase("PubMedID : 26759170,PubMedID : 24597475")@hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
6 Sobic.002G306100 ubiquinol-cytochrome C chaperone family protein, putative, expressed K17662: CBP3, cytochrome b pre-mRNA-processing protein 3
7 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
8 Sobic.001G532400 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
9 Sobic.003G213400 expressed protein -
10 Sobic.008G088824 - -
11 Sobic.003G316200 transmembrane protein 49, putative, expressed -
12 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
13 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
14 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
15 Sobic.002G252400 expressed protein K10706: SETX, senataxin
16 Sobic.009G072700 O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
17 Sobic.006G115100 expressed protein -
18 Sobic.003G329900 FAD dependent oxidoreductase domain containing protein, expressed -
19 Sobic.001G511900 tetratricopeptide repeat domain containing protein, expressed -
20 Sobic.003G310300 pentatricopeptide repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G188500 Sobic004G188500 Sobic004G102750 Sobic004G102750 Sobic004G188500--Sobic004G102750 Sobic003G365100 Sobic003G365100 Sobic004G188500--Sobic003G365100 Sobic008G021400 Sobic008G021400 Sobic004G188500--Sobic008G021400 Sobic006G250800 Sobic006G250800 Sobic004G188500--Sobic006G250800 Sobic007G182000 Sobic007G182000 Sobic004G188500--Sobic007G182000 Sobic002G306100 Sobic002G306100 Sobic004G188500--Sobic002G306100 Sobic009G217400 Sobic009G217400 Sobic004G188500--Sobic009G217400 Sobic001G532400 Sobic001G532400 Sobic004G188500--Sobic001G532400 Sobic003G213400 Sobic003G213400 Sobic004G188500--Sobic003G213400 Sobic007G097300 Sobic007G097300 Sobic004G102750--Sobic007G097300 Sobic003G227501 Sobic003G227501 Sobic004G102750--Sobic003G227501 Sobic009G007200 Sobic009G007200 Sobic004G102750--Sobic009G007200 Sobic004G154532 Sobic004G154532 Sobic004G102750--Sobic004G154532 Sobic004G102750--Sobic004G188500 Sobic003G348000 Sobic003G348000 Sobic004G102750--Sobic003G348000 Sobic003G442601 Sobic003G442601 Sobic004G102750--Sobic003G442601 Sobic004G338701 Sobic004G338701 Sobic004G102750--Sobic004G338701 Sobic002G171101 Sobic002G171101 Sobic004G102750--Sobic002G171101 Sobic003G316200 Sobic003G316200 Sobic003G365100--Sobic003G316200 Sobic003G365100--Sobic002G306100 Sobic001G253300 Sobic001G253300 Sobic003G365100--Sobic001G253300 Sobic005G177700 Sobic005G177700 Sobic003G365100--Sobic005G177700 Sobic003G156400 Sobic003G156400 Sobic003G365100--Sobic003G156400 Sobic003G365100--Sobic007G182000 Sobic003G365100--Sobic006G250800 Sobic001G188400 Sobic001G188400 Sobic003G365100--Sobic001G188400 Sobic005G090300 Sobic005G090300 Sobic003G365100--Sobic005G090300 Sobic010G273300 Sobic010G273300 Sobic008G021400--Sobic010G273300 Sobic001G292900 Sobic001G292900 Sobic008G021400--Sobic001G292900 Sobic001G340000 Sobic001G340000 Sobic008G021400--Sobic001G340000 Sobic008G044900 Sobic008G044900 Sobic008G021400--Sobic008G044900 Sobic002G031900 Sobic002G031900 Sobic008G021400--Sobic002G031900 Sobic010G121100 Sobic010G121100 Sobic008G021400--Sobic010G121100 Sobic008G021400--Sobic009G217400 Sobic005G145550 Sobic005G145550 Sobic008G021400--Sobic005G145550 Sobic001G475200 Sobic001G475200 Sobic008G021400--Sobic001G475200 Sobic002G079000 Sobic002G079000 Sobic006G250800--Sobic002G079000 Sobic006G250800--Sobic001G188400 Sobic006G250800--Sobic009G217400 Sobic006G250800--Sobic003G316200 Sobic002G084800 Sobic002G084800 Sobic006G250800--Sobic002G084800 Sobic009G116900 Sobic009G116900 Sobic006G250800--Sobic009G116900 Sobic007G087000 Sobic007G087000 Sobic006G250800--Sobic007G087000 Sobic006G250800--Sobic001G253300 Sobic006G250800--Sobic002G306100 Sobic007G182000--Sobic009G217400 Sobic007G182000--Sobic003G365100 Sobic007G182000--Sobic001G253300 Sobic007G182000--Sobic006G250800 Sobic007G182000--Sobic007G087000 Sobic002G057400 Sobic002G057400 Sobic007G182000--Sobic002G057400 Sobic003G433400 Sobic003G433400 Sobic007G182000--Sobic003G433400 Sobic003G243800 Sobic003G243800 Sobic007G182000--Sobic003G243800 Sobic001G257800 Sobic001G257800 Sobic007G182000--Sobic001G257800 Sobic010G213500 Sobic010G213500 Sobic002G306100--Sobic010G213500 Sobic002G306100--Sobic007G087000 Sobic002G306100--Sobic003G365100 Sobic002G306100--Sobic002G079000 Sobic002G306100--Sobic003G316200 Sobic002G306100--Sobic006G250800 Sobic002G355800 Sobic002G355800 Sobic002G306100--Sobic002G355800 Sobic003G181700 Sobic003G181700 Sobic002G306100--Sobic003G181700 Sobic002G306100--Sobic005G177700 Sobic009G217400--Sobic007G182000 Sobic009G217400--Sobic006G250800 Sobic002G307800 Sobic002G307800 Sobic009G217400--Sobic002G307800 Sobic009G217400--Sobic003G433400 Sobic009G217400--Sobic009G116900 Sobic003G092800 Sobic003G092800 Sobic009G217400--Sobic003G092800 Sobic009G217400--Sobic001G253300 Sobic009G217400--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic009G217400--Sobic002G180800 Sobic003G409900 Sobic003G409900 Sobic001G532400--Sobic003G409900 Sobic003G021600 Sobic003G021600 Sobic001G532400--Sobic003G021600 Sobic003G114400 Sobic003G114400 Sobic001G532400--Sobic003G114400 Sobic001G205100 Sobic001G205100 Sobic001G532400--Sobic001G205100 Sobic001G532400--Sobic001G188400 Sobic001G532400--Sobic003G365100 Sobic006G060000 Sobic006G060000 Sobic001G532400--Sobic006G060000 Sobic001G389200 Sobic001G389200 Sobic001G532400--Sobic001G389200 Sobic002G252400 Sobic002G252400 Sobic001G532400--Sobic002G252400 Sobic003G235100 Sobic003G235100 Sobic003G213400--Sobic003G235100 Sobic003G213400--Sobic003G365100 Sobic008G171400 Sobic008G171400 Sobic003G213400--Sobic008G171400 Sobic002G200000 Sobic002G200000 Sobic003G213400--Sobic002G200000 Sobic003G213400--Sobic007G087000 Sobic002G198100 Sobic002G198100 Sobic003G213400--Sobic002G198100 Sobic003G213400--Sobic002G084800 Sobic006G039400 Sobic006G039400 Sobic003G213400--Sobic006G039400 Sobic003G213400--Sobic001G188400
Octagon: transcription factors


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