Gene annotation
Transcriptome id Sobic.004G229700.1
Synonym Sb04g027410, SbEPFL1, epidermal patterning factor/EPF-like
Functional annotation Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure. (PubMedID : 23755192)
expressed protein
UniProt C5XYC0
Pfam -
Panther DB PTHR33109 PTHR33109:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10310 : -
RAP-DB (Rice) LOC_Os02g51950.1 : expressed protein
MaizeGDB (Corn) Zm00025a033151 , Zm00025a022157
Brachypodium KQK01828
Barley HORVU6Hr1G077840.9 , HORVU6Hr1G077840.6 , HORVU6Hr1G077840.7 , HORVU6Hr1G077840.4 , HORVU6Hr1G077840.5 , HORVU6Hr1G077840.3 , HORVU6Hr1G077840.1 , HORVU6Hr1G077840.10 , HORVU6Hr1G077840.11
Wheat TraesCS6B02G347500 , TraesCS6A02G317000 , TraesCS6D02G296500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G326800 expressed protein -
2 Sobic.003G365800 expressed protein -
3 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
4 Sobic.001G271600 transferase family protein, putative, expressed -
5 Sobic.003G383700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.005G104100 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.007G023100 CCT motif family protein, expressed -
9 Sobic.001G463301 - -
10 Sobic.001G043500 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
11 Sobic.001G298800 ternary complex factor MIP1, putative, expressed -
12 Sobic.002G355600 - -
13 Sobic.003G283400 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.007G128100 expressed protein -
15 Sobic.007G137101 R2R3 MYB transcription factor(PubMedID : 33633216) K09422: transcription factor MYB, plant
16 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
17 Sobic.003G090600 seven in absentia protein family protein, putative, expressed -
18 Sobic.007G161600 SET domain containing protein, expressed -
19 Sobic.007G121600 - -
20 Sobic.010G022000 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic004G229700 Sobic004G229700 Sobic004G326800 Sobic004G326800 Sobic004G229700--Sobic004G326800 Sobic003G365800 Sobic003G365800 Sobic004G229700--Sobic003G365800 Sobic005G062600 Sobic005G062600 Sobic004G229700--Sobic005G062600 Sobic001G271600 Sobic001G271600 Sobic004G229700--Sobic001G271600 Sobic003G383700 Sobic003G383700 Sobic004G229700--Sobic003G383700 Sobic003G295100 Sobic003G295100 Sobic004G229700--Sobic003G295100 Sobic005G104100 Sobic005G104100 Sobic004G229700--Sobic005G104100 Sobic007G023100 Sobic007G023100 Sobic004G229700--Sobic007G023100 Sobic001G463301 Sobic001G463301 Sobic004G229700--Sobic001G463301 Sobic004G326800--Sobic004G229700 Sobic003G319900 Sobic003G319900 Sobic004G326800--Sobic003G319900 Sobic001G183500 Sobic001G183500 Sobic004G326800--Sobic001G183500 Sobic004G326800--Sobic005G062600 Sobic005G168400 Sobic005G168400 Sobic004G326800--Sobic005G168400 Sobic001G079900 Sobic001G079900 Sobic004G326800--Sobic001G079900 Sobic001G384700 Sobic001G384700 Sobic004G326800--Sobic001G384700 Sobic003G035400 Sobic003G035400 Sobic004G326800--Sobic003G035400 Sobic006G232900 Sobic006G232900 Sobic004G326800--Sobic006G232900 Sobic003G308100 Sobic003G308100 Sobic003G365800--Sobic003G308100 Sobic003G365800--Sobic001G271600 Sobic003G283400 Sobic003G283400 Sobic003G365800--Sobic003G283400 Sobic003G142100 Sobic003G142100 Sobic003G365800--Sobic003G142100 Sobic010G156100 Sobic010G156100 Sobic003G365800--Sobic010G156100 Sobic009G169800 Sobic009G169800 Sobic003G365800--Sobic009G169800 Sobic003G365800--Sobic003G295100 Sobic005G020100 Sobic005G020100 Sobic003G365800--Sobic005G020100 Sobic009G151100 Sobic009G151100 Sobic003G365800--Sobic009G151100 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic008G070700 Sobic008G070700 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900 Sobic001G271600--Sobic003G365800 Sobic001G271600--Sobic005G020100 Sobic003G374100 Sobic003G374100 Sobic001G271600--Sobic003G374100 Sobic006G107500 Sobic006G107500 Sobic001G271600--Sobic006G107500 Sobic006G228000 Sobic006G228000 Sobic001G271600--Sobic006G228000 Sobic001G271600--Sobic003G295100 Sobic003G090600 Sobic003G090600 Sobic001G271600--Sobic003G090600 Sobic001G271600--Sobic009G169800 Sobic003G085900 Sobic003G085900 Sobic001G271600--Sobic003G085900 Sobic003G383700--Sobic001G271600 Sobic003G383700--Sobic003G295100 Sobic003G383700--Sobic003G308100 Sobic003G383700--Sobic003G365800 Sobic003G383700--Sobic004G229700 Sobic003G383700--Sobic003G374100 Sobic004G101200 Sobic004G101200 Sobic003G383700--Sobic004G101200 Sobic003G383700--Sobic003G090600 Sobic007G128100 Sobic007G128100 Sobic003G383700--Sobic007G128100 Sobic002G239101 Sobic002G239101 Sobic003G295100--Sobic002G239101 Sobic002G159000 Sobic002G159000 Sobic003G295100--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic003G295100--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic003G295100--Sobic005G070101 Sobic001G235200 Sobic001G235200 Sobic003G295100--Sobic001G235200 Sobic006G213900 Sobic006G213900 Sobic003G295100--Sobic006G213900 Sobic006G134700 Sobic006G134700 Sobic003G295100--Sobic006G134700 Sobic003G295100--Sobic003G374100 Sobic003G295100--Sobic001G463301 Sobic005G104100--Sobic003G283400 Sobic004G344100 Sobic004G344100 Sobic005G104100--Sobic004G344100 Sobic001G298800 Sobic001G298800 Sobic005G104100--Sobic001G298800 Sobic009G129700 Sobic009G129700 Sobic005G104100--Sobic009G129700 Sobic001G074000 Sobic001G074000 Sobic005G104100--Sobic001G074000 Sobic001G221900 Sobic001G221900 Sobic005G104100--Sobic001G221900 Sobic001G522300 Sobic001G522300 Sobic005G104100--Sobic001G522300 Sobic003G072400 Sobic003G072400 Sobic005G104100--Sobic003G072400 Sobic010G181500 Sobic010G181500 Sobic005G104100--Sobic010G181500 Sobic007G023100--Sobic003G090600 Sobic007G147200 Sobic007G147200 Sobic007G023100--Sobic007G147200 Sobic002G430700 Sobic002G430700 Sobic007G023100--Sobic002G430700 Sobic007G023100--Sobic006G107500 Sobic007G023100--Sobic005G062600 Sobic007G033700 Sobic007G033700 Sobic007G023100--Sobic007G033700 Sobic007G023100--Sobic003G019900 Sobic007G023100--Sobic007G128100 Sobic006G163300 Sobic006G163300 Sobic007G023100--Sobic006G163300 Sobic003G300000 Sobic003G300000 Sobic001G463301--Sobic003G300000 Sobic010G183800 Sobic010G183800 Sobic001G463301--Sobic010G183800 Sobic003G092300 Sobic003G092300 Sobic001G463301--Sobic003G092300 Sobic009G063700 Sobic009G063700 Sobic001G463301--Sobic009G063700 Sobic001G459400 Sobic001G459400 Sobic001G463301--Sobic001G459400 Sobic001G158100 Sobic001G158100 Sobic001G463301--Sobic001G158100 Sobic009G075500 Sobic009G075500 Sobic001G463301--Sobic009G075500 Sobic002G078900 Sobic002G078900 Sobic001G463301--Sobic002G078900 Sobic004G234600 Sobic004G234600 Sobic001G463301--Sobic004G234600
Octagon: transcription factors


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