Gene annotation
Transcriptome id Sobic.004G232100.2,Sobic.004G232100.3,Sobic.004G232100.1
Synonym Sb04g027580
Functional annotation expressed protein
UniProt A0A1Z5RPS3 , C5XYN3
Pfam -
Panther DB PTHR33334 PTHR33334:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64170 : dentin sialophosphoprotein-related
RAP-DB (Rice) LOC_Os02g51760.1 : expressed protein
MaizeGDB (Corn) Zm00025a022144
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
2 Sobic.004G281000 MIKC-type MADS box transcription factors(PubMedID : 19749151)@OsMADS6 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
3 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
4 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
5 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
6 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
7 Sobic.005G070700 - -
8 Sobic.001G459300 - -
9 Sobic.002G078900 agenet domain containing protein, expressed -
10 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
11 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
12 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
13 Sobic.003G300000 expressed protein -
14 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
15 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
16 Sobic.003G381100 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed -
17 Sobic.002G178800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
18 Sobic.003G250100 homeobox domain containing protein, expressed -
19 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.009G048300 transcription factor X1, putative, expressed -


Gene co-expression network
sample Sobic004G232100 Sobic004G232100 Sobic009G075500 Sobic009G075500 Sobic004G232100--Sobic009G075500 Sobic004G281000 Sobic004G281000 Sobic004G232100--Sobic004G281000 Sobic001G459400 Sobic001G459400 Sobic004G232100--Sobic001G459400 Sobic001G216400 Sobic001G216400 Sobic004G232100--Sobic001G216400 Sobic003G092300 Sobic003G092300 Sobic004G232100--Sobic003G092300 Sobic001G456000 Sobic001G456000 Sobic004G232100--Sobic001G456000 Sobic005G070700 Sobic005G070700 Sobic004G232100--Sobic005G070700 Sobic001G459300 Sobic001G459300 Sobic004G232100--Sobic001G459300 Sobic002G078900 Sobic002G078900 Sobic004G232100--Sobic002G078900 Sobic009G075500--Sobic001G459400 Sobic009G075500--Sobic001G216400 Sobic009G063700 Sobic009G063700 Sobic009G075500--Sobic009G063700 Sobic009G075500--Sobic003G092300 Sobic002G239101 Sobic002G239101 Sobic009G075500--Sobic002G239101 Sobic006G213900 Sobic006G213900 Sobic009G075500--Sobic006G213900 Sobic001G158100 Sobic001G158100 Sobic009G075500--Sobic001G158100 Sobic003G300000 Sobic003G300000 Sobic009G075500--Sobic003G300000 Sobic004G056000 Sobic004G056000 Sobic009G075500--Sobic004G056000 Sobic010G183800 Sobic010G183800 Sobic004G281000--Sobic010G183800 Sobic004G281000--Sobic003G300000 Sobic004G281000--Sobic009G075500 Sobic004G281000--Sobic002G078900 Sobic004G234600 Sobic004G234600 Sobic004G281000--Sobic004G234600 Sobic004G281000--Sobic001G456000 Sobic001G457600 Sobic001G457600 Sobic004G281000--Sobic001G457600 Sobic001G071600 Sobic001G071600 Sobic004G281000--Sobic001G071600 Sobic004G281000--Sobic001G216400 Sobic001G459400--Sobic003G092300 Sobic001G459400--Sobic001G459300 Sobic001G459400--Sobic005G070700 Sobic001G459400--Sobic010G183800 Sobic010G048600 Sobic010G048600 Sobic001G459400--Sobic010G048600 Sobic001G459400--Sobic009G075500 Sobic001G459400--Sobic002G078900 Sobic001G459400--Sobic009G063700 Sobic006G015100 Sobic006G015100 Sobic001G459400--Sobic006G015100 Sobic001G216400--Sobic009G075500 Sobic001G216400--Sobic004G234600 Sobic001G216400--Sobic009G063700 Sobic005G166100 Sobic005G166100 Sobic001G216400--Sobic005G166100 Sobic001G419500 Sobic001G419500 Sobic001G216400--Sobic001G419500 Sobic003G381100 Sobic003G381100 Sobic001G216400--Sobic003G381100 Sobic001G216400--Sobic006G213900 Sobic007G193300 Sobic007G193300 Sobic001G216400--Sobic007G193300 Sobic001G216400--Sobic004G056000 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic003G092300--Sobic001G459300 Sobic001G106500 Sobic001G106500 Sobic003G092300--Sobic001G106500 Sobic003G092300--Sobic003G300000 Sobic003G092300--Sobic010G048600 Sobic003G092300--Sobic009G075500 Sobic003G092300--Sobic001G158100 Sobic003G092300--Sobic005G070700 Sobic001G456000--Sobic002G078900 Sobic001G456000--Sobic010G183800 Sobic001G456000--Sobic001G459300 Sobic001G456000--Sobic010G048600 Sobic001G456000--Sobic001G459400 Sobic001G456000--Sobic001G106500 Sobic001G456000--Sobic005G070700 Sobic003G243100 Sobic003G243100 Sobic001G456000--Sobic003G243100 Sobic004G277700 Sobic004G277700 Sobic001G456000--Sobic004G277700 Sobic005G070700--Sobic001G459300 Sobic005G070700--Sobic010G048600 Sobic005G070700--Sobic001G459400 Sobic001G274300 Sobic001G274300 Sobic005G070700--Sobic001G274300 Sobic005G070700--Sobic001G106500 Sobic005G070700--Sobic003G092300 Sobic005G070700--Sobic001G456000 Sobic005G070101 Sobic005G070101 Sobic005G070700--Sobic005G070101 Sobic004G168000 Sobic004G168000 Sobic005G070700--Sobic004G168000 Sobic001G459300--Sobic005G070700 Sobic001G459300--Sobic010G048600 Sobic001G459300--Sobic001G459400 Sobic001G459300--Sobic001G106500 Sobic001G459300--Sobic001G274300 Sobic001G459300--Sobic001G456000 Sobic001G459300--Sobic003G092300 Sobic001G459300--Sobic002G078900 Sobic001G459300--Sobic010G183800 Sobic002G078900--Sobic001G456000 Sobic002G078900--Sobic010G183800 Sobic002G078900--Sobic001G459400 Sobic002G078900--Sobic003G300000 Sobic002G078900--Sobic001G106500 Sobic002G078900--Sobic001G071600 Sobic002G078900--Sobic001G459300 Sobic002G078900--Sobic003G092300 Sobic009G243000 Sobic009G243000 Sobic002G078900--Sobic009G243000
Octagon: transcription factors


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