Gene annotation
Transcriptome id Sobic.004G306400.2,Sobic.004G306400.1
Synonym Sb04g033920
Functional annotation BTB1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain, expressed
UniProt C5XSS3 , A0A1Z5RQB8
Pfam PF00582
Panther DB PTHR31964 PTHR31964:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT1G09740 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os02g52314.1 : BTB1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain, expressed
MaizeGDB (Corn) Zm00025a022192
Brachypodium KQK01791
Barley -
Wheat TraesCS6D02G293300 , TraesCS6B02G344000 , TraesCS6A02G314000
Populus -


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cDNA sequences
Sobic.004G306400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G110600 regulatory protein, putative, expressed -
2 Sobic.010G019500 cytochrome P450 86A1, putative, expressed -
3 Sobic.002G197400 expressed protein -
4 Sobic.004G315400 cation efflux family protein, putative, expressed -
5 Sobic.004G068600 cytochrome P450 71D10, putative, expressed -
6 Sobic.004G267400 basic helix-loop-helix, putative, expressed -
7 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
8 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
9 Sobic.001G533900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
11 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
12 Sobic.009G183650 - -
13 Sobic.007G077466 - -
14 Sobic.004G091300 receptor-like protein kinase precursor, putative, expressed -
15 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
16 Sobic.008G160100 - -
17 Sobic.003G323500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@protein disulfide isomerase, putative, expressed K17609: nucleoredoxin
18 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
20 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase


Gene co-expression network
sample Sobic004G306400 Sobic004G306400 Sobic002G110600 Sobic002G110600 Sobic004G306400--Sobic002G110600 Sobic010G019500 Sobic010G019500 Sobic004G306400--Sobic010G019500 Sobic002G197400 Sobic002G197400 Sobic004G306400--Sobic002G197400 Sobic004G315400 Sobic004G315400 Sobic004G306400--Sobic004G315400 Sobic004G068600 Sobic004G068600 Sobic004G306400--Sobic004G068600 Sobic004G267400 Sobic004G267400 Sobic004G306400--Sobic004G267400 Sobic008G016800 Sobic008G016800 Sobic004G306400--Sobic008G016800 Sobic001G109400 Sobic001G109400 Sobic004G306400--Sobic001G109400 Sobic001G533900 Sobic001G533900 Sobic004G306400--Sobic001G533900 Sobic008G103400 Sobic008G103400 Sobic002G110600--Sobic008G103400 Sobic002G110600--Sobic008G016800 Sobic001G212900 Sobic001G212900 Sobic002G110600--Sobic001G212900 Sobic003G362800 Sobic003G362800 Sobic002G110600--Sobic003G362800 Sobic004G173200 Sobic004G173200 Sobic002G110600--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic002G110600--Sobic010G012200 Sobic002G110600--Sobic001G109400 Sobic002G110600--Sobic004G315400 Sobic002G398600 Sobic002G398600 Sobic002G110600--Sobic002G398600 Sobic010G019500--Sobic004G068600 Sobic010G019500--Sobic002G110600 Sobic009G183650 Sobic009G183650 Sobic010G019500--Sobic009G183650 Sobic010G019500--Sobic008G103400 Sobic010G019500--Sobic004G315400 Sobic007G183600 Sobic007G183600 Sobic010G019500--Sobic007G183600 Sobic001G424650 Sobic001G424650 Sobic010G019500--Sobic001G424650 Sobic010G019500--Sobic004G267400 Sobic005G110553 Sobic005G110553 Sobic010G019500--Sobic005G110553 Sobic004G091300 Sobic004G091300 Sobic002G197400--Sobic004G091300 Sobic008G160100 Sobic008G160100 Sobic002G197400--Sobic008G160100 Sobic002G197400--Sobic002G110600 Sobic002G197400--Sobic008G016800 Sobic004G310400 Sobic004G310400 Sobic002G197400--Sobic004G310400 Sobic001G096200 Sobic001G096200 Sobic002G197400--Sobic001G096200 Sobic004G026000 Sobic004G026000 Sobic002G197400--Sobic004G026000 Sobic002G399000 Sobic002G399000 Sobic002G197400--Sobic002G399000 Sobic003G118500 Sobic003G118500 Sobic002G197400--Sobic003G118500 Sobic002G374000 Sobic002G374000 Sobic004G315400--Sobic002G374000 Sobic004G315400--Sobic010G012200 Sobic004G315400--Sobic001G109400 Sobic004G315400--Sobic001G212900 Sobic004G315400--Sobic008G103400 Sobic001G483001 Sobic001G483001 Sobic004G315400--Sobic001G483001 Sobic004G072201 Sobic004G072201 Sobic004G315400--Sobic004G072201 Sobic005G031400 Sobic005G031400 Sobic004G315400--Sobic005G031400 Sobic004G315400--Sobic002G110600 Sobic004G068600--Sobic010G019500 Sobic004G068600--Sobic004G267400 Sobic004G068600--Sobic007G183600 Sobic004G068600--Sobic004G315400 Sobic004G068600--Sobic004G072201 Sobic004G068600--Sobic002G374000 Sobic004G068600--Sobic008G103400 Sobic001G383200 Sobic001G383200 Sobic004G068600--Sobic001G383200 Sobic004G068600--Sobic001G424650 Sobic004G267400--Sobic004G068600 Sobic001G052700 Sobic001G052700 Sobic004G267400--Sobic001G052700 Sobic006G136300 Sobic006G136300 Sobic004G267400--Sobic006G136300 Sobic004G267400--Sobic002G374000 Sobic006G221500 Sobic006G221500 Sobic004G267400--Sobic006G221500 Sobic004G267400--Sobic007G183600 Sobic004G267400--Sobic004G315400 Sobic003G069601 Sobic003G069601 Sobic004G267400--Sobic003G069601 Sobic005G228650 Sobic005G228650 Sobic004G267400--Sobic005G228650 Sobic008G016800--Sobic002G110600 Sobic008G016800--Sobic001G109400 Sobic008G016800--Sobic008G103400 Sobic008G016800--Sobic002G398600 Sobic008G016800--Sobic001G212900 Sobic006G249600 Sobic006G249600 Sobic008G016800--Sobic006G249600 Sobic008G016800--Sobic003G362800 Sobic008G016800--Sobic001G383200 Sobic001G191300 Sobic001G191300 Sobic008G016800--Sobic001G191300 Sobic001G109400--Sobic001G212900 Sobic001G109400--Sobic004G072201 Sobic001G109400--Sobic002G374000 Sobic002G187900 Sobic002G187900 Sobic001G109400--Sobic002G187900 Sobic001G109400--Sobic001G383200 Sobic001G109400--Sobic006G249600 Sobic006G255200 Sobic006G255200 Sobic001G109400--Sobic006G255200 Sobic001G109400--Sobic004G315400 Sobic001G109400--Sobic008G016800 Sobic001G533900--Sobic010G012200 Sobic001G533900--Sobic008G103400 Sobic008G170800 Sobic008G170800 Sobic001G533900--Sobic008G170800 Sobic001G533900--Sobic004G315400 Sobic001G533900--Sobic001G483001 Sobic006G213350 Sobic006G213350 Sobic001G533900--Sobic006G213350 Sobic005G048800 Sobic005G048800 Sobic001G533900--Sobic005G048800 Sobic001G520000 Sobic001G520000 Sobic001G533900--Sobic001G520000 Sobic006G279100 Sobic006G279100 Sobic001G533900--Sobic006G279100
Octagon: transcription factors


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