Gene annotation
Transcriptome id Sobic.004G307300.1
Synonym Sb04g034000
Functional annotation expressed protein
UniProt A0A194YSK7
Pfam -
Panther DB PTHR33344 PTHR33344:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33380 : -
RAP-DB (Rice) LOC_Os02g52410.1 : expressed protein
MaizeGDB (Corn) Zm00025a022203 , Zm00025a049566
Brachypodium PNT69583 , KQK19017
Barley HORVU5Hr1G033560.1 , HORVU6Hr1G078760.1 , HORVU6Hr1G078760.5 , HORVU6Hr1G078760.2 , HORVU6Hr1G078760.3 , HORVU2Hr1G029880.1 , HORVU6Hr1G078760.6 , HORVU6Hr1G078760.4
Wheat TraesCS6D02G301400 , TraesCS6B02G352500 , TraesCS6B02G352500 , TraesCS6B02G352500 , TraesCS6A02G321700 , TraesCS6A02G321700 , TraesCS6A02G321700 , TraesCS6D02G301400 , TraesCS6D02G301400 , TraesCS6D02G301400 , TraesCS6D02G301400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -
2 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
3 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
4 Sobic.004G265600 tetratricopeptide repeat domain containing protein, expressed -
5 Sobic.004G013000 canopy homolog 2 precursor, putative, expressed -
6 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
7 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
8 Sobic.010G018500 expressed protein -
9 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
10 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
11 Sobic.003G266400 clathrin assembly protein, putative, expressed -
12 Sobic.002G367800 PPR repeat domain containing protein, putative, expressed -
13 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
14 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
15 Sobic.003G254700 glycosyltransferase family 43 protein, putative, expressed -
16 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
17 Sobic.010G134100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
18 Sobic.009G026101 - -
19 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
20 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -


Gene co-expression network
sample Sobic004G307300 Sobic004G307300 Sobic001G392200 Sobic001G392200 Sobic004G307300--Sobic001G392200 Sobic010G042600 Sobic010G042600 Sobic004G307300--Sobic010G042600 Sobic001G116000 Sobic001G116000 Sobic004G307300--Sobic001G116000 Sobic004G265600 Sobic004G265600 Sobic004G307300--Sobic004G265600 Sobic004G013000 Sobic004G013000 Sobic004G307300--Sobic004G013000 Sobic002G186300 Sobic002G186300 Sobic004G307300--Sobic002G186300 Sobic002G342500 Sobic002G342500 Sobic004G307300--Sobic002G342500 Sobic010G018500 Sobic010G018500 Sobic004G307300--Sobic010G018500 Sobic006G267500 Sobic006G267500 Sobic004G307300--Sobic006G267500 Sobic002G070300 Sobic002G070300 Sobic001G392200--Sobic002G070300 Sobic009G041800 Sobic009G041800 Sobic001G392200--Sobic009G041800 Sobic002G232400 Sobic002G232400 Sobic001G392200--Sobic002G232400 Sobic001G011000 Sobic001G011000 Sobic001G392200--Sobic001G011000 Sobic002G153000 Sobic002G153000 Sobic001G392200--Sobic002G153000 Sobic010G101600 Sobic010G101600 Sobic001G392200--Sobic010G101600 Sobic002G101300 Sobic002G101300 Sobic001G392200--Sobic002G101300 Sobic004G218600 Sobic004G218600 Sobic001G392200--Sobic004G218600 Sobic002G186900 Sobic002G186900 Sobic001G392200--Sobic002G186900 Sobic003G118100 Sobic003G118100 Sobic010G042600--Sobic003G118100 Sobic009G206500 Sobic009G206500 Sobic010G042600--Sobic009G206500 Sobic001G144200 Sobic001G144200 Sobic010G042600--Sobic001G144200 Sobic010G042600--Sobic006G267500 Sobic003G266400 Sobic003G266400 Sobic010G042600--Sobic003G266400 Sobic010G042600--Sobic010G018500 Sobic001G196000 Sobic001G196000 Sobic010G042600--Sobic001G196000 Sobic006G035600 Sobic006G035600 Sobic010G042600--Sobic006G035600 Sobic001G500400 Sobic001G500400 Sobic010G042600--Sobic001G500400 Sobic001G196100 Sobic001G196100 Sobic001G116000--Sobic001G196100 Sobic001G035400 Sobic001G035400 Sobic001G116000--Sobic001G035400 Sobic007G044400 Sobic007G044400 Sobic001G116000--Sobic007G044400 Sobic007G048700 Sobic007G048700 Sobic001G116000--Sobic007G048700 Sobic002G313600 Sobic002G313600 Sobic001G116000--Sobic002G313600 Sobic008G084100 Sobic008G084100 Sobic001G116000--Sobic008G084100 Sobic001G026600 Sobic001G026600 Sobic001G116000--Sobic001G026600 Sobic004G031800 Sobic004G031800 Sobic001G116000--Sobic004G031800 Sobic004G184000 Sobic004G184000 Sobic001G116000--Sobic004G184000 Sobic009G125900 Sobic009G125900 Sobic004G265600--Sobic009G125900 Sobic004G265600--Sobic001G116000 Sobic009G063400 Sobic009G063400 Sobic004G265600--Sobic009G063400 Sobic009G026101 Sobic009G026101 Sobic004G265600--Sobic009G026101 Sobic004G203900 Sobic004G203900 Sobic004G265600--Sobic004G203900 Sobic002G075500 Sobic002G075500 Sobic004G265600--Sobic002G075500 Sobic003G254700 Sobic003G254700 Sobic004G265600--Sobic003G254700 Sobic010G090500 Sobic010G090500 Sobic004G265600--Sobic010G090500 Sobic008G174900 Sobic008G174900 Sobic004G265600--Sobic008G174900 Sobic004G212100 Sobic004G212100 Sobic004G013000--Sobic004G212100 Sobic010G258000 Sobic010G258000 Sobic004G013000--Sobic010G258000 Sobic001G365200 Sobic001G365200 Sobic004G013000--Sobic001G365200 Sobic004G013000--Sobic004G307300 Sobic004G013000--Sobic004G218600 Sobic004G013000--Sobic001G392200 Sobic004G013000--Sobic001G035400 Sobic002G090500 Sobic002G090500 Sobic004G013000--Sobic002G090500 Sobic007G208000 Sobic007G208000 Sobic004G013000--Sobic007G208000 Sobic001G458800 Sobic001G458800 Sobic002G186300--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic002G186300--Sobic003G034900 Sobic007G119600 Sobic007G119600 Sobic002G186300--Sobic007G119600 Sobic004G297700 Sobic004G297700 Sobic002G186300--Sobic004G297700 Sobic004G244000 Sobic004G244000 Sobic002G186300--Sobic004G244000 Sobic001G115700 Sobic001G115700 Sobic002G186300--Sobic001G115700 Sobic009G224400 Sobic009G224400 Sobic002G186300--Sobic009G224400 Sobic001G457000 Sobic001G457000 Sobic002G186300--Sobic001G457000 Sobic008G057900 Sobic008G057900 Sobic002G186300--Sobic008G057900 Sobic001G338400 Sobic001G338400 Sobic002G342500--Sobic001G338400 Sobic005G074100 Sobic005G074100 Sobic002G342500--Sobic005G074100 Sobic001G145500 Sobic001G145500 Sobic002G342500--Sobic001G145500 Sobic003G348800 Sobic003G348800 Sobic002G342500--Sobic003G348800 Sobic001G322000 Sobic001G322000 Sobic002G342500--Sobic001G322000 Sobic006G179700 Sobic006G179700 Sobic002G342500--Sobic006G179700 Sobic007G013300 Sobic007G013300 Sobic002G342500--Sobic007G013300 Sobic007G161200 Sobic007G161200 Sobic002G342500--Sobic007G161200 Sobic003G053700 Sobic003G053700 Sobic002G342500--Sobic003G053700 Sobic001G146000 Sobic001G146000 Sobic010G018500--Sobic001G146000 Sobic010G018500--Sobic002G232400 Sobic010G018500--Sobic003G266400 Sobic001G543400 Sobic001G543400 Sobic010G018500--Sobic001G543400 Sobic010G018500--Sobic008G084100 Sobic010G018500--Sobic002G153000 Sobic010G018500--Sobic002G101300 Sobic010G018500--Sobic010G042600 Sobic004G356300 Sobic004G356300 Sobic010G018500--Sobic004G356300 Sobic009G061000 Sobic009G061000 Sobic006G267500--Sobic009G061000 Sobic006G267500--Sobic009G206500 Sobic009G212100 Sobic009G212100 Sobic006G267500--Sobic009G212100 Sobic006G254500 Sobic006G254500 Sobic006G267500--Sobic006G254500 Sobic001G437500 Sobic001G437500 Sobic006G267500--Sobic001G437500 Sobic004G315700 Sobic004G315700 Sobic006G267500--Sobic004G315700 Sobic006G267500--Sobic010G090500 Sobic005G204700 Sobic005G204700 Sobic006G267500--Sobic005G204700 Sobic001G296800 Sobic001G296800 Sobic006G267500--Sobic001G296800
Octagon: transcription factors


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