Gene annotation
Transcriptome id Sobic.004G013000.1,Sobic.004G013000.2
Synonym
Functional annotation canopy homolog 2 precursor, putative, expressed
UniProt A0A1Z5RKW6 , A0A194YM47
Pfam PF11938
Panther DB PTHR31775 PTHR31775:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G42480 : -
RAP-DB (Rice) LOC_Os02g02524.1 : canopy homolog 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a007534 , Zm00025a035048
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
2 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
3 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
4 Sobic.004G307300 expressed protein -
5 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
6 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -
7 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
8 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
9 Sobic.007G208000 geranylgeranyl transferase type-2 subunit beta, putative, expressed K05956: geranylgeranyl transferase type-2 subunit beta
10 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
11 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
12 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
13 Sobic.005G194900 phosphoserine phosphatase, chloroplast precursor, putative, expressed K01079: serB, phosphoserine phosphatase
14 Sobic.002G271300 NC domain-containing protein, putative, expressed -
15 Sobic.010G040100 expressed protein -
16 Sobic.003G169900 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
17 Sobic.002G101300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
18 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
19 Sobic.007G044400 MSP domain containing protein, expressed -
20 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu


Gene co-expression network
sample Sobic004G013000 Sobic004G013000 Sobic004G212100 Sobic004G212100 Sobic004G013000--Sobic004G212100 Sobic010G258000 Sobic010G258000 Sobic004G013000--Sobic010G258000 Sobic001G365200 Sobic001G365200 Sobic004G013000--Sobic001G365200 Sobic004G307300 Sobic004G307300 Sobic004G013000--Sobic004G307300 Sobic004G218600 Sobic004G218600 Sobic004G013000--Sobic004G218600 Sobic001G392200 Sobic001G392200 Sobic004G013000--Sobic001G392200 Sobic001G035400 Sobic001G035400 Sobic004G013000--Sobic001G035400 Sobic002G090500 Sobic002G090500 Sobic004G013000--Sobic002G090500 Sobic007G208000 Sobic007G208000 Sobic004G013000--Sobic007G208000 Sobic002G367800 Sobic002G367800 Sobic004G212100--Sobic002G367800 Sobic001G011000 Sobic001G011000 Sobic004G212100--Sobic001G011000 Sobic009G041800 Sobic009G041800 Sobic004G212100--Sobic009G041800 Sobic003G388900 Sobic003G388900 Sobic004G212100--Sobic003G388900 Sobic002G070300 Sobic002G070300 Sobic004G212100--Sobic002G070300 Sobic001G161700 Sobic001G161700 Sobic004G212100--Sobic001G161700 Sobic004G034300 Sobic004G034300 Sobic004G212100--Sobic004G034300 Sobic001G522000 Sobic001G522000 Sobic004G212100--Sobic001G522000 Sobic001G490500 Sobic001G490500 Sobic004G212100--Sobic001G490500 Sobic001G473400 Sobic001G473400 Sobic010G258000--Sobic001G473400 Sobic006G203900 Sobic006G203900 Sobic010G258000--Sobic006G203900 Sobic010G258000--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic010G258000--Sobic001G073600 Sobic003G388700 Sobic003G388700 Sobic010G258000--Sobic003G388700 Sobic009G016500 Sobic009G016500 Sobic010G258000--Sobic009G016500 Sobic003G170300 Sobic003G170300 Sobic010G258000--Sobic003G170300 Sobic008G136800 Sobic008G136800 Sobic010G258000--Sobic008G136800 Sobic007G119600 Sobic007G119600 Sobic010G258000--Sobic007G119600 Sobic004G161900 Sobic004G161900 Sobic001G365200--Sobic004G161900 Sobic003G368000 Sobic003G368000 Sobic001G365200--Sobic003G368000 Sobic002G383900 Sobic002G383900 Sobic001G365200--Sobic002G383900 Sobic003G105000 Sobic003G105000 Sobic001G365200--Sobic003G105000 Sobic005G022500 Sobic005G022500 Sobic001G365200--Sobic005G022500 Sobic010G045400 Sobic010G045400 Sobic001G365200--Sobic010G045400 Sobic007G119500 Sobic007G119500 Sobic001G365200--Sobic007G119500 Sobic006G000600 Sobic006G000600 Sobic001G365200--Sobic006G000600 Sobic008G037900 Sobic008G037900 Sobic001G365200--Sobic008G037900 Sobic004G307300--Sobic001G392200 Sobic010G042600 Sobic010G042600 Sobic004G307300--Sobic010G042600 Sobic001G116000 Sobic001G116000 Sobic004G307300--Sobic001G116000 Sobic004G265600 Sobic004G265600 Sobic004G307300--Sobic004G265600 Sobic004G307300--Sobic004G013000 Sobic002G186300 Sobic002G186300 Sobic004G307300--Sobic002G186300 Sobic002G342500 Sobic002G342500 Sobic004G307300--Sobic002G342500 Sobic010G018500 Sobic010G018500 Sobic004G307300--Sobic010G018500 Sobic006G267500 Sobic006G267500 Sobic004G307300--Sobic006G267500 Sobic002G153000 Sobic002G153000 Sobic004G218600--Sobic002G153000 Sobic001G457000 Sobic001G457000 Sobic004G218600--Sobic001G457000 Sobic002G352200 Sobic002G352200 Sobic004G218600--Sobic002G352200 Sobic001G543400 Sobic001G543400 Sobic004G218600--Sobic001G543400 Sobic003G260600 Sobic003G260600 Sobic004G218600--Sobic003G260600 Sobic004G218600--Sobic002G070300 Sobic002G255400 Sobic002G255400 Sobic004G218600--Sobic002G255400 Sobic003G049200 Sobic003G049200 Sobic004G218600--Sobic003G049200 Sobic004G218600--Sobic007G119600 Sobic001G392200--Sobic002G070300 Sobic001G392200--Sobic009G041800 Sobic002G232400 Sobic002G232400 Sobic001G392200--Sobic002G232400 Sobic001G392200--Sobic001G011000 Sobic001G392200--Sobic002G153000 Sobic010G101600 Sobic010G101600 Sobic001G392200--Sobic010G101600 Sobic002G101300 Sobic002G101300 Sobic001G392200--Sobic002G101300 Sobic001G392200--Sobic004G218600 Sobic002G186900 Sobic002G186900 Sobic001G392200--Sobic002G186900 Sobic004G344800 Sobic004G344800 Sobic001G035400--Sobic004G344800 Sobic001G035400--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic001G035400--Sobic008G084100 Sobic007G092100 Sobic007G092100 Sobic001G035400--Sobic007G092100 Sobic009G164700 Sobic009G164700 Sobic001G035400--Sobic009G164700 Sobic002G087000 Sobic002G087000 Sobic001G035400--Sobic002G087000 Sobic001G035400--Sobic001G073600 Sobic001G443200 Sobic001G443200 Sobic001G035400--Sobic001G443200 Sobic001G035400--Sobic001G116000 Sobic002G090500--Sobic002G153000 Sobic002G090500--Sobic002G232400 Sobic001G352800 Sobic001G352800 Sobic002G090500--Sobic001G352800 Sobic004G356300 Sobic004G356300 Sobic002G090500--Sobic004G356300 Sobic003G075200 Sobic003G075200 Sobic002G090500--Sobic003G075200 Sobic002G090500--Sobic004G218600 Sobic002G090500--Sobic001G011000 Sobic002G090500--Sobic001G543400 Sobic008G057900 Sobic008G057900 Sobic002G090500--Sobic008G057900 Sobic004G060300 Sobic004G060300 Sobic007G208000--Sobic004G060300 Sobic010G192600 Sobic010G192600 Sobic007G208000--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic007G208000--Sobic008G018500 Sobic010G250000 Sobic010G250000 Sobic007G208000--Sobic010G250000 Sobic002G029300 Sobic002G029300 Sobic007G208000--Sobic002G029300 Sobic001G455000 Sobic001G455000 Sobic007G208000--Sobic001G455000 Sobic003G005900 Sobic003G005900 Sobic007G208000--Sobic003G005900 Sobic001G358500 Sobic001G358500 Sobic007G208000--Sobic001G358500 Sobic010G028400 Sobic010G028400 Sobic007G208000--Sobic010G028400
Octagon: transcription factors


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