Gene annotation
Transcriptome id Sobic.004G308200.1
Synonym MUR2, ATFUT1, FT1, ATFT1, Sb04g034070
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
xyloglucan fucosyltransferase, putative, expressed
UniProt C5XST9
Pfam PF03254
Panther DB PTHR31889 PTHR31889:SF3
NCBI CDD -
KEGG Orthology K13681; xyloglucan fucosyltransferase
Gene Ontology GO:0016020; membrane GO:0008107galactoside 2-alpha-L-fucosyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G03220 : fucosyltransferase 1
RAP-DB (Rice) LOC_Os02g52560.1 : xyloglucan fucosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a033100
Brachypodium KQK01764 , PNT69576
Barley HORVU7Hr1G035620.1 , HORVU7Hr1G035620.3 , HORVU7Hr1G035620.2 , HORVU6Hr1G078650.13 , HORVU6Hr1G078650.14 , HORVU6Hr1G078650.11 , HORVU6Hr1G078650.12 , HORVU6Hr1G078650.7 , HORVU6Hr1G078650.4 , HORVU6Hr1G078650.5 , HORVU6Hr1G078650.2 , HORVU6Hr1G078650.3 , HORVU6Hr1G078650.1 , HORVU6Hr1G078650.8 , HORVU6Hr1G078650.9 , HORVU7Hr1G026180.1 , HORVU7Hr1G026180.2
Wheat TraesCS6A02G320400 , TraesCS6B02G351300 , TraesCS7B02G075800 , TraesCS6B02G351200 , TraesCS6D02G300000 , TraesCS7D02G171700 , TraesCS7D02G171700 , TraesCS7A02G124400 , TraesCS6D02G300400 , TraesCS7D02G172100 , TraesCS7A02G124700 , TraesCS7A02G171600 , TraesCS7B02G076400 , TraesCS6A02G320500
Populus -


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cDNA sequences
Sobic.004G308200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G212400 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
2 Sobic.001G016500 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
3 Sobic.001G036900 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
4 Sobic.008G130400 prefoldin, putative, expressed -
5 Sobic.004G349700 rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed K14563: NOP1, rRNA 2'-O-methyltransferase fibrillarin
6 Sobic.006G138100 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
7 Sobic.004G252100 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
8 Sobic.003G109600 40S ribosomal protein S5, putative, expressed K02989: RP-S5e, small subunit ribosomal protein S5e
9 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
10 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
11 Sobic.001G436200 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e
12 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
13 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
14 Sobic.009G232000 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
15 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
16 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
17 Sobic.009G223300 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
18 Sobic.009G180000 OsCam1-3 - Calmodulin, expressed K02183: calmodulin
19 Sobic.002G375100 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
20 Sobic.002G123500 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase


Gene co-expression network
sample Sobic004G308200 Sobic004G308200 Sobic009G212400 Sobic009G212400 Sobic004G308200--Sobic009G212400 Sobic001G016500 Sobic001G016500 Sobic004G308200--Sobic001G016500 Sobic001G036900 Sobic001G036900 Sobic004G308200--Sobic001G036900 Sobic008G130400 Sobic008G130400 Sobic004G308200--Sobic008G130400 Sobic004G349700 Sobic004G349700 Sobic004G308200--Sobic004G349700 Sobic006G138100 Sobic006G138100 Sobic004G308200--Sobic006G138100 Sobic004G252100 Sobic004G252100 Sobic004G308200--Sobic004G252100 Sobic003G109600 Sobic003G109600 Sobic004G308200--Sobic003G109600 Sobic002G379500 Sobic002G379500 Sobic004G308200--Sobic002G379500 Sobic003G387900 Sobic003G387900 Sobic009G212400--Sobic003G387900 Sobic006G216600 Sobic006G216600 Sobic009G212400--Sobic006G216600 Sobic002G304900 Sobic002G304900 Sobic009G212400--Sobic002G304900 Sobic001G039400 Sobic001G039400 Sobic009G212400--Sobic001G039400 Sobic005G050500 Sobic005G050500 Sobic009G212400--Sobic005G050500 Sobic009G179100 Sobic009G179100 Sobic009G212400--Sobic009G179100 Sobic010G069400 Sobic010G069400 Sobic009G212400--Sobic010G069400 Sobic002G056200 Sobic002G056200 Sobic009G212400--Sobic002G056200 Sobic001G483100 Sobic001G483100 Sobic009G212400--Sobic001G483100 Sobic009G050300 Sobic009G050300 Sobic001G016500--Sobic009G050300 Sobic006G116700 Sobic006G116700 Sobic001G016500--Sobic006G116700 Sobic002G081600 Sobic002G081600 Sobic001G016500--Sobic002G081600 Sobic001G016500--Sobic002G379500 Sobic003G346600 Sobic003G346600 Sobic001G016500--Sobic003G346600 Sobic001G018900 Sobic001G018900 Sobic001G016500--Sobic001G018900 Sobic001G016400 Sobic001G016400 Sobic001G016500--Sobic001G016400 Sobic004G008400 Sobic004G008400 Sobic001G016500--Sobic004G008400 Sobic007G197800 Sobic007G197800 Sobic001G016500--Sobic007G197800 Sobic001G036900--Sobic001G018900 Sobic001G036900--Sobic006G116700 Sobic009G215200 Sobic009G215200 Sobic001G036900--Sobic009G215200 Sobic001G036900--Sobic009G050300 Sobic001G403500 Sobic001G403500 Sobic001G036900--Sobic001G403500 Sobic001G036900--Sobic001G016400 Sobic001G036900--Sobic007G197800 Sobic003G408100 Sobic003G408100 Sobic001G036900--Sobic003G408100 Sobic001G054900 Sobic001G054900 Sobic001G036900--Sobic001G054900 Sobic002G263800 Sobic002G263800 Sobic008G130400--Sobic002G263800 Sobic009G232000 Sobic009G232000 Sobic008G130400--Sobic009G232000 Sobic008G132700 Sobic008G132700 Sobic008G130400--Sobic008G132700 Sobic001G513500 Sobic001G513500 Sobic008G130400--Sobic001G513500 Sobic001G418900 Sobic001G418900 Sobic008G130400--Sobic001G418900 Sobic008G130400--Sobic001G483100 Sobic004G310300 Sobic004G310300 Sobic008G130400--Sobic004G310300 Sobic008G130400--Sobic006G138100 Sobic004G224900 Sobic004G224900 Sobic008G130400--Sobic004G224900 Sobic004G349700--Sobic010G069400 Sobic004G349700--Sobic001G039400 Sobic004G349700--Sobic003G387900 Sobic001G085400 Sobic001G085400 Sobic004G349700--Sobic001G085400 Sobic002G047600 Sobic002G047600 Sobic004G349700--Sobic002G047600 Sobic004G349700--Sobic002G304900 Sobic009G233400 Sobic009G233400 Sobic004G349700--Sobic009G233400 Sobic002G115000 Sobic002G115000 Sobic004G349700--Sobic002G115000 Sobic007G019400 Sobic007G019400 Sobic004G349700--Sobic007G019400 Sobic001G436200 Sobic001G436200 Sobic006G138100--Sobic001G436200 Sobic006G138100--Sobic002G047600 Sobic006G138100--Sobic002G379500 Sobic007G019000 Sobic007G019000 Sobic006G138100--Sobic007G019000 Sobic006G137100 Sobic006G137100 Sobic006G138100--Sobic006G137100 Sobic006G138100--Sobic004G008400 Sobic006G138100--Sobic003G109600 Sobic006G138100--Sobic009G050300 Sobic006G138100--Sobic006G116700 Sobic004G252100--Sobic001G016500 Sobic005G019700 Sobic005G019700 Sobic004G252100--Sobic005G019700 Sobic004G252100--Sobic006G116700 Sobic004G252100--Sobic001G018900 Sobic004G252100--Sobic007G019000 Sobic007G190800 Sobic007G190800 Sobic004G252100--Sobic007G190800 Sobic001G533500 Sobic001G533500 Sobic004G252100--Sobic001G533500 Sobic004G252100--Sobic009G050300 Sobic004G252100--Sobic007G197800 Sobic003G109600--Sobic002G379500 Sobic009G223300 Sobic009G223300 Sobic003G109600--Sobic009G223300 Sobic003G109600--Sobic001G403500 Sobic003G109600--Sobic001G039400 Sobic003G249700 Sobic003G249700 Sobic003G109600--Sobic003G249700 Sobic003G109600--Sobic002G056200 Sobic003G109600--Sobic002G047600 Sobic003G109600--Sobic007G019400 Sobic003G436700 Sobic003G436700 Sobic003G109600--Sobic003G436700 Sobic002G379500--Sobic009G050300 Sobic006G213000 Sobic006G213000 Sobic002G379500--Sobic006G213000 Sobic002G379500--Sobic002G056200 Sobic002G379500--Sobic001G403500 Sobic002G379500--Sobic006G116700 Sobic002G379500--Sobic003G109600 Sobic002G379500--Sobic007G197800 Sobic004G198400 Sobic004G198400 Sobic002G379500--Sobic004G198400 Sobic002G379500--Sobic004G008400
Octagon: transcription factors


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