Gene annotation
Transcriptome id Sobic.004G332900.2,Sobic.004G332900.1
Synonym AtDBP1, DBP1
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C6JSF1 , A0A120GUM6 , A0A1Z5RQ47
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF299
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology K14803; protein phosphatase PTC2/3
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT2G25620 : DNA-binding protein phosphatase 1
RAP-DB (Rice) LOC_Os02g55560.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a054666 , Zm00025a022494 , Zm00025a032909
Brachypodium KQK19338
Barley HORVU6Hr1G086560.4 , HORVU6Hr1G086560.7 , HORVU6Hr1G086560.6 , HORVU6Hr1G086560.8 , HORVU6Hr1G086560.1 , HORVU6Hr1G086560.3 , HORVU6Hr1G086560.2 , HORVU6Hr1G086560.5
Wheat TraesCS6A02G363900 , TraesCS6B02G398500
Populus -


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cDNA sequences
Sobic.004G332900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
2 Sobic.001G499300 high-affinity nickel-transport family protein, putative, expressed -
3 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
4 Sobic.003G357300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.001G351000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
6 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
7 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
8 Sobic.001G459200 MYB family transcription factor, putative, expressed -
9 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
10 Sobic.001G281400 expressed protein -
11 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
12 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
13 Sobic.001G445800 expressed protein -
14 Sobic.003G306100 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
15 Sobic.006G106100 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
16 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
17 Sobic.001G091801 - K02978: RP-S27e, small subunit ribosomal protein S27e
18 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -
19 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
20 Sobic.002G398901 - -


Gene co-expression network
sample Sobic004G332900 Sobic004G332900 Sobic002G312400 Sobic002G312400 Sobic004G332900--Sobic002G312400 Sobic001G499300 Sobic001G499300 Sobic004G332900--Sobic001G499300 Sobic001G034700 Sobic001G034700 Sobic004G332900--Sobic001G034700 Sobic003G357300 Sobic003G357300 Sobic004G332900--Sobic003G357300 Sobic001G351000 Sobic001G351000 Sobic004G332900--Sobic001G351000 Sobic010G041600 Sobic010G041600 Sobic004G332900--Sobic010G041600 Sobic010G178200 Sobic010G178200 Sobic004G332900--Sobic010G178200 Sobic001G459200 Sobic001G459200 Sobic004G332900--Sobic001G459200 Sobic003G285800 Sobic003G285800 Sobic004G332900--Sobic003G285800 Sobic001G281400 Sobic001G281400 Sobic002G312400--Sobic001G281400 Sobic002G312400--Sobic001G499300 Sobic004G187900 Sobic004G187900 Sobic002G312400--Sobic004G187900 Sobic002G312400--Sobic004G332900 Sobic002G211900 Sobic002G211900 Sobic002G312400--Sobic002G211900 Sobic006G173900 Sobic006G173900 Sobic002G312400--Sobic006G173900 Sobic002G082600 Sobic002G082600 Sobic002G312400--Sobic002G082600 Sobic009G023200 Sobic009G023200 Sobic002G312400--Sobic009G023200 Sobic004G177700 Sobic004G177700 Sobic002G312400--Sobic004G177700 Sobic001G499300--Sobic001G281400 Sobic009G008900 Sobic009G008900 Sobic001G499300--Sobic009G008900 Sobic001G177800 Sobic001G177800 Sobic001G499300--Sobic001G177800 Sobic001G499300--Sobic004G187900 Sobic001G499300--Sobic001G459200 Sobic001G499300--Sobic006G173900 Sobic001G393500 Sobic001G393500 Sobic001G499300--Sobic001G393500 Sobic001G499300--Sobic002G312400 Sobic001G477300 Sobic001G477300 Sobic001G499300--Sobic001G477300 Sobic001G034700--Sobic010G041600 Sobic001G086300 Sobic001G086300 Sobic001G034700--Sobic001G086300 Sobic001G048832 Sobic001G048832 Sobic001G034700--Sobic001G048832 Sobic009G176000 Sobic009G176000 Sobic001G034700--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic001G034700--Sobic007G051000 Sobic005G188100 Sobic005G188100 Sobic001G034700--Sobic005G188100 Sobic001G034700--Sobic003G285800 Sobic001G034700--Sobic010G178200 Sobic003G150000 Sobic003G150000 Sobic001G034700--Sobic003G150000 Sobic004G301000 Sobic004G301000 Sobic003G357300--Sobic004G301000 Sobic004G100700 Sobic004G100700 Sobic003G357300--Sobic004G100700 Sobic003G393900 Sobic003G393900 Sobic003G357300--Sobic003G393900 Sobic001G108200 Sobic001G108200 Sobic003G357300--Sobic001G108200 Sobic004G306300 Sobic004G306300 Sobic003G357300--Sobic004G306300 Sobic006G275200 Sobic006G275200 Sobic003G357300--Sobic006G275200 Sobic009G070400 Sobic009G070400 Sobic003G357300--Sobic009G070400 Sobic002G393000 Sobic002G393000 Sobic003G357300--Sobic002G393000 Sobic001G308300 Sobic001G308300 Sobic003G357300--Sobic001G308300 Sobic004G065500 Sobic004G065500 Sobic001G351000--Sobic004G065500 Sobic004G220000 Sobic004G220000 Sobic001G351000--Sobic004G220000 Sobic004G171400 Sobic004G171400 Sobic001G351000--Sobic004G171400 Sobic001G459800 Sobic001G459800 Sobic001G351000--Sobic001G459800 Sobic006G267200 Sobic006G267200 Sobic001G351000--Sobic006G267200 Sobic009G141800 Sobic009G141800 Sobic001G351000--Sobic009G141800 Sobic001G351000--Sobic003G393900 Sobic005G113300 Sobic005G113300 Sobic001G351000--Sobic005G113300 Sobic003G228900 Sobic003G228900 Sobic001G351000--Sobic003G228900 Sobic010G041600--Sobic001G034700 Sobic010G041600--Sobic001G281400 Sobic004G272800 Sobic004G272800 Sobic010G041600--Sobic004G272800 Sobic002G190900 Sobic002G190900 Sobic010G041600--Sobic002G190900 Sobic008G185400 Sobic008G185400 Sobic010G041600--Sobic008G185400 Sobic010G041600--Sobic001G086300 Sobic010G041600--Sobic010G178200 Sobic008G129400 Sobic008G129400 Sobic010G041600--Sobic008G129400 Sobic010G041600--Sobic007G051000 Sobic002G345300 Sobic002G345300 Sobic010G178200--Sobic002G345300 Sobic010G178200--Sobic003G285800 Sobic003G350300 Sobic003G350300 Sobic010G178200--Sobic003G350300 Sobic010G178200--Sobic010G041600 Sobic010G178200--Sobic001G034700 Sobic010G178200--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200 Sobic009G185800 Sobic009G185800 Sobic001G459200--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic001G459200--Sobic003G253000 Sobic001G459200--Sobic001G499300 Sobic004G055200 Sobic004G055200 Sobic001G459200--Sobic004G055200 Sobic002G267500 Sobic002G267500 Sobic001G459200--Sobic002G267500 Sobic001G459200--Sobic002G046100 Sobic001G459200--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic001G459200--Sobic003G181500 Sobic003G130800 Sobic003G130800 Sobic001G459200--Sobic003G130800 Sobic003G285800--Sobic002G046100 Sobic002G187500 Sobic002G187500 Sobic003G285800--Sobic002G187500 Sobic003G285800--Sobic010G178200 Sobic003G285800--Sobic003G350300 Sobic003G285800--Sobic002G345300 Sobic003G285800--Sobic001G477300 Sobic003G285800--Sobic001G281400 Sobic010G086200 Sobic010G086200 Sobic003G285800--Sobic010G086200 Sobic009G129000 Sobic009G129000 Sobic003G285800--Sobic009G129000
Octagon: transcription factors


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