Gene annotation
Transcriptome id Sobic.005G011400.1
Synonym Sb05g001020
Functional annotation expressed protein
UniProt C5Y3F2
Pfam PF06320
Panther DB PTHR13073 PTHR13073:SF0
NCBI CDD KOG3390; General control of amino-acid synthesis 5-like 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30330 : GCN5L1 family protein
RAP-DB (Rice) LOC_Os11g02110.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G046970.5 , HORVU5Hr1G046970.4 , HORVU5Hr1G046970.2 , HORVU5Hr1G046970.9
Wheat TraesCS5B02G147400 , TraesCS5D02G144100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G016200 expressed protein -
2 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
3 Sobic.009G054000 expressed protein -
4 Sobic.004G265700 anaphase-promoting complex subunit 11, putative, expressed K03868: RBX1, RING-box protein 1
5 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
6 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
7 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
8 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
9 Sobic.003G357300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.007G016100 - -
11 Sobic.001G445800 expressed protein -
12 Sobic.010G150575 - -
13 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -
14 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
15 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
16 Sobic.001G422900 zinc finger family protein, putative, expressed -
17 Sobic.001G037000 PHD finger protein, putative, expressed -
18 Sobic.001G329800 allene oxide cyclase 4, chloroplast precursor, putative, expressed K10525: allene oxide cyclase
19 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
20 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170


Gene co-expression network
sample Sobic005G011400 Sobic005G011400 Sobic006G016200 Sobic006G016200 Sobic005G011400--Sobic006G016200 Sobic001G067601 Sobic001G067601 Sobic005G011400--Sobic001G067601 Sobic009G054000 Sobic009G054000 Sobic005G011400--Sobic009G054000 Sobic004G265700 Sobic004G265700 Sobic005G011400--Sobic004G265700 Sobic002G211900 Sobic002G211900 Sobic005G011400--Sobic002G211900 Sobic010G153100 Sobic010G153100 Sobic005G011400--Sobic010G153100 Sobic010G217900 Sobic010G217900 Sobic005G011400--Sobic010G217900 Sobic010G225300 Sobic010G225300 Sobic005G011400--Sobic010G225300 Sobic003G357300 Sobic003G357300 Sobic005G011400--Sobic003G357300 Sobic002G218000 Sobic002G218000 Sobic006G016200--Sobic002G218000 Sobic005G111100 Sobic005G111100 Sobic006G016200--Sobic005G111100 Sobic002G373800 Sobic002G373800 Sobic006G016200--Sobic002G373800 Sobic009G016201 Sobic009G016201 Sobic006G016200--Sobic009G016201 Sobic006G016200--Sobic005G011400 Sobic010G243200 Sobic010G243200 Sobic006G016200--Sobic010G243200 Sobic001G398600 Sobic001G398600 Sobic006G016200--Sobic001G398600 Sobic009G036900 Sobic009G036900 Sobic006G016200--Sobic009G036900 Sobic010G150575 Sobic010G150575 Sobic006G016200--Sobic010G150575 Sobic001G019900 Sobic001G019900 Sobic001G067601--Sobic001G019900 Sobic009G023200 Sobic009G023200 Sobic001G067601--Sobic009G023200 Sobic002G046100 Sobic002G046100 Sobic001G067601--Sobic002G046100 Sobic001G067601--Sobic010G217900 Sobic003G063200 Sobic003G063200 Sobic001G067601--Sobic003G063200 Sobic001G037000 Sobic001G037000 Sobic001G067601--Sobic001G037000 Sobic005G228000 Sobic005G228000 Sobic001G067601--Sobic005G228000 Sobic003G181500 Sobic003G181500 Sobic001G067601--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic001G067601--Sobic003G162700 Sobic004G123000 Sobic004G123000 Sobic009G054000--Sobic004G123000 Sobic001G404800 Sobic001G404800 Sobic009G054000--Sobic001G404800 Sobic003G209000 Sobic003G209000 Sobic009G054000--Sobic003G209000 Sobic003G129800 Sobic003G129800 Sobic009G054000--Sobic003G129800 Sobic010G028200 Sobic010G028200 Sobic009G054000--Sobic010G028200 Sobic009G179100 Sobic009G179100 Sobic009G054000--Sobic009G179100 Sobic001G334300 Sobic001G334300 Sobic009G054000--Sobic001G334300 Sobic009G101700 Sobic009G101700 Sobic009G054000--Sobic009G101700 Sobic003G155400 Sobic003G155400 Sobic009G054000--Sobic003G155400 Sobic004G265700--Sobic005G111100 Sobic002G078400 Sobic002G078400 Sobic004G265700--Sobic002G078400 Sobic001G041100 Sobic001G041100 Sobic004G265700--Sobic001G041100 Sobic003G362400 Sobic003G362400 Sobic004G265700--Sobic003G362400 Sobic006G141500 Sobic006G141500 Sobic004G265700--Sobic006G141500 Sobic010G065400 Sobic010G065400 Sobic004G265700--Sobic010G065400 Sobic002G116200 Sobic002G116200 Sobic004G265700--Sobic002G116200 Sobic002G222900 Sobic002G222900 Sobic004G265700--Sobic002G222900 Sobic007G068000 Sobic007G068000 Sobic004G265700--Sobic007G068000 Sobic003G249800 Sobic003G249800 Sobic002G211900--Sobic003G249800 Sobic001G015100 Sobic001G015100 Sobic002G211900--Sobic001G015100 Sobic002G211900--Sobic003G181500 Sobic004G177700 Sobic004G177700 Sobic002G211900--Sobic004G177700 Sobic002G211900--Sobic002G046100 Sobic001G477300 Sobic001G477300 Sobic002G211900--Sobic001G477300 Sobic002G312400 Sobic002G312400 Sobic002G211900--Sobic002G312400 Sobic001G095300 Sobic001G095300 Sobic002G211900--Sobic001G095300 Sobic001G308300 Sobic001G308300 Sobic002G211900--Sobic001G308300 Sobic001G084900 Sobic001G084900 Sobic010G153100--Sobic001G084900 Sobic001G224400 Sobic001G224400 Sobic010G153100--Sobic001G224400 Sobic010G153100--Sobic003G155400 Sobic001G445800 Sobic001G445800 Sobic010G153100--Sobic001G445800 Sobic010G154700 Sobic010G154700 Sobic010G153100--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic010G153100--Sobic010G213400 Sobic007G115100 Sobic007G115100 Sobic010G153100--Sobic007G115100 Sobic010G153100--Sobic001G067601 Sobic010G153100--Sobic006G141500 Sobic010G217900--Sobic001G067601 Sobic010G217900--Sobic001G019900 Sobic010G217900--Sobic005G228000 Sobic001G533300 Sobic001G533300 Sobic010G217900--Sobic001G533300 Sobic004G247200 Sobic004G247200 Sobic010G217900--Sobic004G247200 Sobic010G217900--Sobic001G037000 Sobic010G217900--Sobic003G162700 Sobic010G217900--Sobic004G177700 Sobic005G028700 Sobic005G028700 Sobic010G217900--Sobic005G028700 Sobic010G225300--Sobic002G222900 Sobic001G128400 Sobic001G128400 Sobic010G225300--Sobic001G128400 Sobic001G066700 Sobic001G066700 Sobic010G225300--Sobic001G066700 Sobic010G225300--Sobic005G111100 Sobic010G225300--Sobic003G155400 Sobic010G225300--Sobic002G218000 Sobic001G459200 Sobic001G459200 Sobic010G225300--Sobic001G459200 Sobic007G091000 Sobic007G091000 Sobic010G225300--Sobic007G091000 Sobic010G225300--Sobic001G067601 Sobic004G301000 Sobic004G301000 Sobic003G357300--Sobic004G301000 Sobic004G100700 Sobic004G100700 Sobic003G357300--Sobic004G100700 Sobic003G393900 Sobic003G393900 Sobic003G357300--Sobic003G393900 Sobic001G108200 Sobic001G108200 Sobic003G357300--Sobic001G108200 Sobic004G306300 Sobic004G306300 Sobic003G357300--Sobic004G306300 Sobic006G275200 Sobic006G275200 Sobic003G357300--Sobic006G275200 Sobic009G070400 Sobic009G070400 Sobic003G357300--Sobic009G070400 Sobic002G393000 Sobic002G393000 Sobic003G357300--Sobic002G393000 Sobic003G357300--Sobic001G308300
Octagon: transcription factors


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