Gene annotation
Transcriptome id Sobic.005G050800.3
Synonym Sb05g004152
Functional annotation expressed protein
UniProt A0A1Z5RGR3
Pfam PF07893
Panther DB PTHR33085 PTHR33085:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g49050.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G052810.2 , HORVU7Hr1G052810.1 , HORVU7Hr1G052810.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G348100 white-brown complex homolog protein, putative, expressed -
2 Sobic.003G435300 OsDegp14 - Putative Deg protease homologue, expressed -
3 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
4 Sobic.001G529200 no apical meristem protein, putative, expressed -
5 Sobic.004G116400 OsFBK5 - F-box domain and kelch repeat containing protein, expressed -
6 Sobic.008G120920 - -
7 Sobic.010G189432 - -
8 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
9 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
10 Sobic.010G273100 OsPOP15 - Putative Prolyl Oligopeptidase homologue, expressed -
11 Sobic.004G046800 expressed protein -
12 Sobic.002G096300 kinase, pfkB family, putative, expressed -
13 Sobic.005G136100 - -
14 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
15 Sobic.008G054700 growth regulator related protein, putative, expressed -
16 Sobic.004G007400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
17 Sobic.003G065100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR1 - Auxin-responsive SAUR gene family member, expressed -
18 Sobic.005G072600 expressed protein -
19 Sobic.003G187700 polygalacturonase, putative, expressed -
20 Sobic.009G259200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase


Gene co-expression network
sample Sobic005G050800 Sobic005G050800 Sobic003G348100 Sobic003G348100 Sobic005G050800--Sobic003G348100 Sobic003G435300 Sobic003G435300 Sobic005G050800--Sobic003G435300 Sobic001G400000 Sobic001G400000 Sobic005G050800--Sobic001G400000 Sobic001G529200 Sobic001G529200 Sobic005G050800--Sobic001G529200 Sobic004G116400 Sobic004G116400 Sobic005G050800--Sobic004G116400 Sobic008G120920 Sobic008G120920 Sobic005G050800--Sobic008G120920 Sobic010G189432 Sobic010G189432 Sobic005G050800--Sobic010G189432 Sobic004G253200 Sobic004G253200 Sobic005G050800--Sobic004G253200 Sobic002G186200 Sobic002G186200 Sobic005G050800--Sobic002G186200 Sobic003G348100--Sobic001G400000 Sobic003G348100--Sobic004G253200 Sobic008G055600 Sobic008G055600 Sobic003G348100--Sobic008G055600 Sobic003G348100--Sobic008G120920 Sobic001G112600 Sobic001G112600 Sobic003G348100--Sobic001G112600 Sobic003G244400 Sobic003G244400 Sobic003G348100--Sobic003G244400 Sobic003G441000 Sobic003G441000 Sobic003G348100--Sobic003G441000 Sobic003G348100--Sobic010G189432 Sobic004G046800 Sobic004G046800 Sobic003G348100--Sobic004G046800 Sobic008G054700 Sobic008G054700 Sobic003G435300--Sobic008G054700 Sobic006G265800 Sobic006G265800 Sobic003G435300--Sobic006G265800 Sobic001G539400 Sobic001G539400 Sobic003G435300--Sobic001G539400 Sobic010G153400 Sobic010G153400 Sobic003G435300--Sobic010G153400 Sobic003G358600 Sobic003G358600 Sobic003G435300--Sobic003G358600 Sobic003G435300--Sobic008G120920 Sobic001G384200 Sobic001G384200 Sobic003G435300--Sobic001G384200 Sobic009G220700 Sobic009G220700 Sobic003G435300--Sobic009G220700 Sobic003G435300--Sobic001G400000 Sobic004G113600 Sobic004G113600 Sobic001G400000--Sobic004G113600 Sobic001G400000--Sobic001G112600 Sobic001G400000--Sobic001G384200 Sobic005G050400 Sobic005G050400 Sobic001G400000--Sobic005G050400 Sobic001G400000--Sobic003G244400 Sobic001G400000--Sobic006G265800 Sobic004G007400 Sobic004G007400 Sobic001G400000--Sobic004G007400 Sobic001G400000--Sobic008G055600 Sobic008G156600 Sobic008G156600 Sobic001G400000--Sobic008G156600 Sobic010G253200 Sobic010G253200 Sobic001G529200--Sobic010G253200 Sobic001G529200--Sobic002G186200 Sobic002G420100 Sobic002G420100 Sobic001G529200--Sobic002G420100 Sobic004G241300 Sobic004G241300 Sobic001G529200--Sobic004G241300 Sobic004G261800 Sobic004G261800 Sobic001G529200--Sobic004G261800 Sobic001G529200--Sobic003G348100 Sobic003G423700 Sobic003G423700 Sobic001G529200--Sobic003G423700 Sobic008G011800 Sobic008G011800 Sobic001G529200--Sobic008G011800 Sobic003G159700 Sobic003G159700 Sobic001G529200--Sobic003G159700 Sobic004G116400--Sobic001G400000 Sobic004G116400--Sobic004G046800 Sobic004G116400--Sobic005G050400 Sobic004G145701 Sobic004G145701 Sobic004G116400--Sobic004G145701 Sobic004G116400--Sobic001G112600 Sobic002G054700 Sobic002G054700 Sobic004G116400--Sobic002G054700 Sobic004G116400--Sobic008G120920 Sobic004G116400--Sobic008G054700 Sobic004G116400--Sobic004G113600 Sobic002G111100 Sobic002G111100 Sobic008G120920--Sobic002G111100 Sobic008G055200 Sobic008G055200 Sobic008G120920--Sobic008G055200 Sobic008G120920--Sobic004G046800 Sobic005G002100 Sobic005G002100 Sobic008G120920--Sobic005G002100 Sobic008G120920--Sobic003G244400 Sobic005G136100 Sobic005G136100 Sobic008G120920--Sobic005G136100 Sobic001G103100 Sobic001G103100 Sobic008G120920--Sobic001G103100 Sobic003G290500 Sobic003G290500 Sobic008G120920--Sobic003G290500 Sobic004G358000 Sobic004G358000 Sobic008G120920--Sobic004G358000 Sobic010G189432--Sobic004G253200 Sobic010G189432--Sobic008G055600 Sobic003G187700 Sobic003G187700 Sobic010G189432--Sobic003G187700 Sobic009G119600 Sobic009G119600 Sobic010G189432--Sobic009G119600 Sobic001G213666 Sobic001G213666 Sobic010G189432--Sobic001G213666 Sobic001G342101 Sobic001G342101 Sobic010G189432--Sobic001G342101 Sobic004G120500 Sobic004G120500 Sobic010G189432--Sobic004G120500 Sobic010G189432--Sobic001G400000 Sobic009G087100 Sobic009G087100 Sobic010G189432--Sobic009G087100 Sobic004G253200--Sobic008G055600 Sobic004G253200--Sobic003G187700 Sobic004G253200--Sobic009G119600 Sobic004G253200--Sobic010G189432 Sobic004G253200--Sobic004G120500 Sobic004G253200--Sobic001G342101 Sobic005G144000 Sobic005G144000 Sobic004G253200--Sobic005G144000 Sobic004G253200--Sobic001G213666 Sobic001G279000 Sobic001G279000 Sobic004G253200--Sobic001G279000 Sobic002G186200--Sobic004G261800 Sobic002G186200--Sobic003G423700 Sobic002G186200--Sobic010G253200 Sobic002G186200--Sobic002G420100 Sobic002G186200--Sobic004G241300 Sobic001G126800 Sobic001G126800 Sobic002G186200--Sobic001G126800 Sobic002G186200--Sobic008G156600 Sobic003G013700 Sobic003G013700 Sobic002G186200--Sobic003G013700 Sobic002G186200--Sobic001G400000
Octagon: transcription factors


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