Gene annotation
Transcriptome id Sobic.005G091100.1
Synonym
Functional annotation -
UniProt A0A1B6PR44
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
2 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
3 Sobic.001G267100 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
4 Sobic.001G145200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.001G304800 expressed protein -
6 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
7 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
8 Sobic.001G355900 expressed protein -
9 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.004G168600 heat shock protein-related, putative, expressed -
11 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
12 Sobic.003G043900 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
13 Sobic.002G224200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
14 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
15 Sobic.002G142200 expressed protein -
16 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
17 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
18 Sobic.005G231400 cyclin, putative, expressed K18813: cyclin D7, plant
19 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
20 Sobic.006G074900 heat shock protein-related, putative, expressed -


Gene co-expression network
sample Sobic005G091100 Sobic005G091100 Sobic007G111700 Sobic007G111700 Sobic005G091100--Sobic007G111700 Sobic005G091000 Sobic005G091000 Sobic005G091100--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic005G091100--Sobic001G267100 Sobic001G145200 Sobic001G145200 Sobic005G091100--Sobic001G145200 Sobic001G304800 Sobic001G304800 Sobic005G091100--Sobic001G304800 Sobic001G160000 Sobic001G160000 Sobic005G091100--Sobic001G160000 Sobic006G272500 Sobic006G272500 Sobic005G091100--Sobic006G272500 Sobic001G355900 Sobic001G355900 Sobic005G091100--Sobic001G355900 Sobic006G105600 Sobic006G105600 Sobic005G091100--Sobic006G105600 Sobic008G170400 Sobic008G170400 Sobic007G111700--Sobic008G170400 Sobic002G016400 Sobic002G016400 Sobic007G111700--Sobic002G016400 Sobic005G098400 Sobic005G098400 Sobic007G111700--Sobic005G098400 Sobic007G050500 Sobic007G050500 Sobic007G111700--Sobic007G050500 Sobic005G025900 Sobic005G025900 Sobic007G111700--Sobic005G025900 Sobic001G345200 Sobic001G345200 Sobic007G111700--Sobic001G345200 Sobic002G034301 Sobic002G034301 Sobic007G111700--Sobic002G034301 Sobic007G202100 Sobic007G202100 Sobic007G111700--Sobic007G202100 Sobic003G419600 Sobic003G419600 Sobic007G111700--Sobic003G419600 Sobic002G032500 Sobic002G032500 Sobic005G091000--Sobic002G032500 Sobic005G091000--Sobic006G105600 Sobic005G091000--Sobic001G267100 Sobic003G309400 Sobic003G309400 Sobic005G091000--Sobic003G309400 Sobic003G089300 Sobic003G089300 Sobic005G091000--Sobic003G089300 Sobic003G338200 Sobic003G338200 Sobic005G091000--Sobic003G338200 Sobic001G381100 Sobic001G381100 Sobic005G091000--Sobic001G381100 Sobic002G224200 Sobic002G224200 Sobic005G091000--Sobic002G224200 Sobic006G074900 Sobic006G074900 Sobic005G091000--Sobic006G074900 Sobic006G187000 Sobic006G187000 Sobic001G267100--Sobic006G187000 Sobic001G267100--Sobic005G091000 Sobic001G267100--Sobic001G145200 Sobic001G267100--Sobic006G105600 Sobic009G137500 Sobic009G137500 Sobic001G267100--Sobic009G137500 Sobic001G267100--Sobic001G381100 Sobic001G267100--Sobic001G345200 Sobic004G168600 Sobic004G168600 Sobic001G267100--Sobic004G168600 Sobic001G267100--Sobic006G074900 Sobic001G145200--Sobic001G267100 Sobic001G145200--Sobic001G381100 Sobic001G145200--Sobic006G074900 Sobic001G145200--Sobic004G168600 Sobic008G190000 Sobic008G190000 Sobic001G145200--Sobic008G190000 Sobic006G255300 Sobic006G255300 Sobic001G145200--Sobic006G255300 Sobic001G145200--Sobic001G345200 Sobic001G145200--Sobic001G160000 Sobic005G092700 Sobic005G092700 Sobic001G145200--Sobic005G092700 Sobic002G296000 Sobic002G296000 Sobic001G304800--Sobic002G296000 Sobic002G286700 Sobic002G286700 Sobic001G304800--Sobic002G286700 Sobic008G083500 Sobic008G083500 Sobic001G304800--Sobic008G083500 Sobic009G101100 Sobic009G101100 Sobic001G304800--Sobic009G101100 Sobic001G304800--Sobic006G105600 Sobic007G218100 Sobic007G218100 Sobic001G304800--Sobic007G218100 Sobic003G246800 Sobic003G246800 Sobic001G304800--Sobic003G246800 Sobic009G146250 Sobic009G146250 Sobic001G304800--Sobic009G146250 Sobic006G124400 Sobic006G124400 Sobic001G304800--Sobic006G124400 Sobic001G160000--Sobic006G187000 Sobic001G160000--Sobic008G190000 Sobic003G366000 Sobic003G366000 Sobic001G160000--Sobic003G366000 Sobic001G160000--Sobic001G381100 Sobic001G160000--Sobic005G092700 Sobic010G192500 Sobic010G192500 Sobic001G160000--Sobic010G192500 Sobic001G075700 Sobic001G075700 Sobic001G160000--Sobic001G075700 Sobic001G160000--Sobic001G267100 Sobic001G160000--Sobic005G091000 Sobic009G124800 Sobic009G124800 Sobic006G272500--Sobic009G124800 Sobic001G285200 Sobic001G285200 Sobic006G272500--Sobic001G285200 Sobic002G293700 Sobic002G293700 Sobic006G272500--Sobic002G293700 Sobic010G010900 Sobic010G010900 Sobic006G272500--Sobic010G010900 Sobic002G419200 Sobic002G419200 Sobic006G272500--Sobic002G419200 Sobic001G296100 Sobic001G296100 Sobic006G272500--Sobic001G296100 Sobic007G160300 Sobic007G160300 Sobic006G272500--Sobic007G160300 Sobic002G370400 Sobic002G370400 Sobic006G272500--Sobic002G370400 Sobic008G148500 Sobic008G148500 Sobic006G272500--Sobic008G148500 Sobic001G355900--Sobic005G025900 Sobic001G355900--Sobic007G111700 Sobic004G233700 Sobic004G233700 Sobic001G355900--Sobic004G233700 Sobic010G007000 Sobic010G007000 Sobic001G355900--Sobic010G007000 Sobic001G355900--Sobic001G267100 Sobic001G355900--Sobic007G050500 Sobic001G355900--Sobic008G170400 Sobic001G355900--Sobic005G091100 Sobic001G355900--Sobic002G016400 Sobic006G105600--Sobic005G091000 Sobic006G105600--Sobic001G267100 Sobic006G105600--Sobic006G124400 Sobic006G105600--Sobic002G296000 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic006G105600--Sobic004G233700 Sobic006G105600--Sobic008G083500 Sobic006G105600--Sobic001G304800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.