Gene annotation
Transcriptome id Sobic.001G355900.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QMY1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g26180.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK21498
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G025900 "domain confirmed by Pfam database, expression supported by NCBI EST database,expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
2 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
3 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
4 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
5 Sobic.001G267100 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
6 Sobic.007G050500 MYB family transcription factor, putative, expressed -
7 Sobic.008G170400 expressed protein -
8 Sobic.005G091100 - -
9 Sobic.002G016400 monocopper oxidase, putative, expressed -
10 Sobic.001G145200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
11 Sobic.003G419600 disease resistance protein RGA2, putative, expressed -
12 Sobic.002G142200 expressed protein -
13 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
14 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
15 Sobic.005G057000 Leucine Rich Repeat family protein, expressed -
16 Sobic.001G304800 expressed protein -
17 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
18 Sobic.003G043900 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
19 Sobic.001G402400 expressed protein -
20 Sobic.003G296500 leucine rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic001G355900 Sobic001G355900 Sobic005G025900 Sobic005G025900 Sobic001G355900--Sobic005G025900 Sobic007G111700 Sobic007G111700 Sobic001G355900--Sobic007G111700 Sobic004G233700 Sobic004G233700 Sobic001G355900--Sobic004G233700 Sobic010G007000 Sobic010G007000 Sobic001G355900--Sobic010G007000 Sobic001G267100 Sobic001G267100 Sobic001G355900--Sobic001G267100 Sobic007G050500 Sobic007G050500 Sobic001G355900--Sobic007G050500 Sobic008G170400 Sobic008G170400 Sobic001G355900--Sobic008G170400 Sobic005G091100 Sobic005G091100 Sobic001G355900--Sobic005G091100 Sobic002G016400 Sobic002G016400 Sobic001G355900--Sobic002G016400 Sobic005G025900--Sobic004G233700 Sobic005G025900--Sobic007G050500 Sobic001G144200 Sobic001G144200 Sobic005G025900--Sobic001G144200 Sobic005G025900--Sobic007G111700 Sobic002G158900 Sobic002G158900 Sobic005G025900--Sobic002G158900 Sobic005G025900--Sobic001G355900 Sobic005G231300 Sobic005G231300 Sobic005G025900--Sobic005G231300 Sobic005G025900--Sobic002G016400 Sobic001G402400 Sobic001G402400 Sobic005G025900--Sobic001G402400 Sobic007G111700--Sobic008G170400 Sobic007G111700--Sobic002G016400 Sobic005G098400 Sobic005G098400 Sobic007G111700--Sobic005G098400 Sobic007G111700--Sobic007G050500 Sobic007G111700--Sobic005G025900 Sobic001G345200 Sobic001G345200 Sobic007G111700--Sobic001G345200 Sobic002G034301 Sobic002G034301 Sobic007G111700--Sobic002G034301 Sobic007G202100 Sobic007G202100 Sobic007G111700--Sobic007G202100 Sobic003G419600 Sobic003G419600 Sobic007G111700--Sobic003G419600 Sobic009G208900 Sobic009G208900 Sobic004G233700--Sobic009G208900 Sobic006G105600 Sobic006G105600 Sobic004G233700--Sobic006G105600 Sobic004G233700--Sobic005G025900 Sobic003G420100 Sobic003G420100 Sobic004G233700--Sobic003G420100 Sobic002G142200 Sobic002G142200 Sobic004G233700--Sobic002G142200 Sobic005G144600 Sobic005G144600 Sobic004G233700--Sobic005G144600 Sobic007G113300 Sobic007G113300 Sobic004G233700--Sobic007G113300 Sobic007G168900 Sobic007G168900 Sobic004G233700--Sobic007G168900 Sobic002G296000 Sobic002G296000 Sobic004G233700--Sobic002G296000 Sobic002G064600 Sobic002G064600 Sobic010G007000--Sobic002G064600 Sobic010G007000--Sobic003G419600 Sobic005G110600 Sobic005G110600 Sobic010G007000--Sobic005G110600 Sobic010G007000--Sobic008G170400 Sobic006G062300 Sobic006G062300 Sobic010G007000--Sobic006G062300 Sobic003G296500 Sobic003G296500 Sobic010G007000--Sobic003G296500 Sobic005G112000 Sobic005G112000 Sobic010G007000--Sobic005G112000 Sobic010G007000--Sobic001G402400 Sobic002G062600 Sobic002G062600 Sobic010G007000--Sobic002G062600 Sobic006G187000 Sobic006G187000 Sobic001G267100--Sobic006G187000 Sobic005G091000 Sobic005G091000 Sobic001G267100--Sobic005G091000 Sobic001G145200 Sobic001G145200 Sobic001G267100--Sobic001G145200 Sobic001G267100--Sobic006G105600 Sobic009G137500 Sobic009G137500 Sobic001G267100--Sobic009G137500 Sobic001G381100 Sobic001G381100 Sobic001G267100--Sobic001G381100 Sobic001G267100--Sobic001G345200 Sobic004G168600 Sobic004G168600 Sobic001G267100--Sobic004G168600 Sobic006G074900 Sobic006G074900 Sobic001G267100--Sobic006G074900 Sobic007G050500--Sobic002G016400 Sobic007G050500--Sobic005G098400 Sobic007G050500--Sobic001G267100 Sobic002G278200 Sobic002G278200 Sobic007G050500--Sobic002G278200 Sobic001G305300 Sobic001G305300 Sobic007G050500--Sobic001G305300 Sobic007G120301 Sobic007G120301 Sobic007G050500--Sobic007G120301 Sobic007G050500--Sobic005G025900 Sobic007G050500--Sobic001G345200 Sobic007G050500--Sobic007G111700 Sobic008G170400--Sobic007G111700 Sobic008G170400--Sobic002G016400 Sobic008G170400--Sobic005G098400 Sobic005G231400 Sobic005G231400 Sobic008G170400--Sobic005G231400 Sobic003G418300 Sobic003G418300 Sobic008G170400--Sobic003G418300 Sobic008G170400--Sobic010G007000 Sobic008G170400--Sobic005G110600 Sobic008G170400--Sobic002G064600 Sobic008G170400--Sobic006G062300 Sobic005G091100--Sobic007G111700 Sobic005G091100--Sobic005G091000 Sobic005G091100--Sobic001G267100 Sobic005G091100--Sobic001G145200 Sobic001G304800 Sobic001G304800 Sobic005G091100--Sobic001G304800 Sobic001G160000 Sobic001G160000 Sobic005G091100--Sobic001G160000 Sobic006G272500 Sobic006G272500 Sobic005G091100--Sobic006G272500 Sobic005G091100--Sobic001G355900 Sobic005G091100--Sobic006G105600 Sobic002G016400--Sobic005G098400 Sobic002G016400--Sobic003G418300 Sobic002G016400--Sobic007G050500 Sobic002G016400--Sobic001G305300 Sobic002G016400--Sobic001G345200 Sobic007G208100 Sobic007G208100 Sobic002G016400--Sobic007G208100 Sobic006G149300 Sobic006G149300 Sobic002G016400--Sobic006G149300 Sobic001G382700 Sobic001G382700 Sobic002G016400--Sobic001G382700 Sobic002G016400--Sobic008G170400
Octagon: transcription factors


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