Gene annotation
Transcriptome id Sobic.005G117100.2,Sobic.005G117100.1
Synonym Sb05g017110
Functional annotation expressed protein
UniProt C5Y2H6
Pfam -
Panther DB PTHR34959 PTHR34959:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14090 : -
RAP-DB (Rice) LOC_Os11g29840.1 : expressed protein
MaizeGDB (Corn) Zm00025a029724
Brachypodium KQJ88511
Barley HORVU6Hr1G093860.6 , HORVU6Hr1G093860.4 , HORVU6Hr1G093860.5 , HORVU6Hr1G093860.2 , HORVU6Hr1G093860.3 , HORVU6Hr1G093860.1
Wheat TraesCS6D02G396500 , TraesCS6D02G396500 , TraesCS6B02G461400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G290600 stress-induced protein, putative, expressed -
2 Sobic.006G073150 - -
3 Sobic.009G159600 ATROPGEF7/ROPGEF7, putative, expressed -
4 Sobic.004G259101 - -
5 Sobic.001G267266 - -
6 Sobic.001G339400 proline-rich protein, putative, expressed -
7 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
8 Sobic.003G349800 domain of unknown function DUF966 domain containing protein, expressed -
9 Sobic.003G320500 early nodulin 20 precursor, putative, expressed -
10 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
11 Sobic.001G375900 Brix domain containing protein, putative, expressed -
12 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
13 Sobic.006G053800 LGC1, putative, expressed -
14 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
15 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.004G225400 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
17 Sobic.001G535400 remorin, putative, expressed -
18 Sobic.009G102800 MRH1, putative, expressed -
19 Sobic.004G154600 expressed protein -
20 Sobic.002G120200 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic005G117100 Sobic005G117100 Sobic003G290600 Sobic003G290600 Sobic005G117100--Sobic003G290600 Sobic006G073150 Sobic006G073150 Sobic005G117100--Sobic006G073150 Sobic009G159600 Sobic009G159600 Sobic005G117100--Sobic009G159600 Sobic004G259101 Sobic004G259101 Sobic005G117100--Sobic004G259101 Sobic001G267266 Sobic001G267266 Sobic005G117100--Sobic001G267266 Sobic001G339400 Sobic001G339400 Sobic005G117100--Sobic001G339400 Sobic003G029300 Sobic003G029300 Sobic005G117100--Sobic003G029300 Sobic003G349800 Sobic003G349800 Sobic005G117100--Sobic003G349800 Sobic003G320500 Sobic003G320500 Sobic005G117100--Sobic003G320500 Sobic003G290600--Sobic005G117100 Sobic003G290600--Sobic006G073150 Sobic003G290600--Sobic001G267266 Sobic002G045800 Sobic002G045800 Sobic003G290600--Sobic002G045800 Sobic004G296100 Sobic004G296100 Sobic003G290600--Sobic004G296100 Sobic003G290600--Sobic003G029300 Sobic003G023666 Sobic003G023666 Sobic003G290600--Sobic003G023666 Sobic006G053800 Sobic006G053800 Sobic003G290600--Sobic006G053800 Sobic009G102800 Sobic009G102800 Sobic003G290600--Sobic009G102800 Sobic001G451200 Sobic001G451200 Sobic006G073150--Sobic001G451200 Sobic007G072800 Sobic007G072800 Sobic006G073150--Sobic007G072800 Sobic002G416200 Sobic002G416200 Sobic006G073150--Sobic002G416200 Sobic006G073150--Sobic001G267266 Sobic003G048700 Sobic003G048700 Sobic006G073150--Sobic003G048700 Sobic006G073150--Sobic003G290600 Sobic002G018901 Sobic002G018901 Sobic006G073150--Sobic002G018901 Sobic002G120200 Sobic002G120200 Sobic006G073150--Sobic002G120200 Sobic010G153532 Sobic010G153532 Sobic006G073150--Sobic010G153532 Sobic009G159600--Sobic004G259101 Sobic009G159600--Sobic003G349800 Sobic003G399400 Sobic003G399400 Sobic009G159600--Sobic003G399400 Sobic002G219500 Sobic002G219500 Sobic009G159600--Sobic002G219500 Sobic001G258100 Sobic001G258100 Sobic009G159600--Sobic001G258100 Sobic004G225400 Sobic004G225400 Sobic009G159600--Sobic004G225400 Sobic002G004500 Sobic002G004500 Sobic009G159600--Sobic002G004500 Sobic001G026700 Sobic001G026700 Sobic009G159600--Sobic001G026700 Sobic003G174900 Sobic003G174900 Sobic009G159600--Sobic003G174900 Sobic004G259101--Sobic001G258100 Sobic002G072700 Sobic002G072700 Sobic004G259101--Sobic002G072700 Sobic004G154600 Sobic004G154600 Sobic004G259101--Sobic004G154600 Sobic004G259101--Sobic009G159600 Sobic001G267800 Sobic001G267800 Sobic004G259101--Sobic001G267800 Sobic009G259500 Sobic009G259500 Sobic004G259101--Sobic009G259500 Sobic010G010900 Sobic010G010900 Sobic004G259101--Sobic010G010900 Sobic001G514400 Sobic001G514400 Sobic004G259101--Sobic001G514400 Sobic009G248900 Sobic009G248900 Sobic004G259101--Sobic009G248900 Sobic002G302100 Sobic002G302100 Sobic001G267266--Sobic002G302100 Sobic001G049000 Sobic001G049000 Sobic001G267266--Sobic001G049000 Sobic002G004400 Sobic002G004400 Sobic001G267266--Sobic002G004400 Sobic001G267266--Sobic006G053800 Sobic004G356600 Sobic004G356600 Sobic001G267266--Sobic004G356600 Sobic002G034400 Sobic002G034400 Sobic001G267266--Sobic002G034400 Sobic005G097700 Sobic005G097700 Sobic001G267266--Sobic005G097700 Sobic003G221300 Sobic003G221300 Sobic001G267266--Sobic003G221300 Sobic006G228400 Sobic006G228400 Sobic001G267266--Sobic006G228400 Sobic003G151300 Sobic003G151300 Sobic001G339400--Sobic003G151300 Sobic001G339400--Sobic009G102800 Sobic001G535400 Sobic001G535400 Sobic001G339400--Sobic001G535400 Sobic004G205500 Sobic004G205500 Sobic001G339400--Sobic004G205500 Sobic005G169700 Sobic005G169700 Sobic001G339400--Sobic005G169700 Sobic001G339400--Sobic003G174900 Sobic003G420800 Sobic003G420800 Sobic001G339400--Sobic003G420800 Sobic009G175200 Sobic009G175200 Sobic001G339400--Sobic009G175200 Sobic001G195000 Sobic001G195000 Sobic001G339400--Sobic001G195000 Sobic007G154800 Sobic007G154800 Sobic003G029300--Sobic007G154800 Sobic007G123200 Sobic007G123200 Sobic003G029300--Sobic007G123200 Sobic003G029300--Sobic009G102800 Sobic004G240900 Sobic004G240900 Sobic003G029300--Sobic004G240900 Sobic004G193800 Sobic004G193800 Sobic003G029300--Sobic004G193800 Sobic004G151900 Sobic004G151900 Sobic003G029300--Sobic004G151900 Sobic006G062400 Sobic006G062400 Sobic003G029300--Sobic006G062400 Sobic004G016500 Sobic004G016500 Sobic003G029300--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G029300--Sobic001G046600 Sobic003G349800--Sobic009G159600 Sobic003G349800--Sobic004G225400 Sobic003G349800--Sobic002G219500 Sobic001G375900 Sobic001G375900 Sobic003G349800--Sobic001G375900 Sobic003G349800--Sobic003G048700 Sobic003G349800--Sobic004G259101 Sobic003G349800--Sobic005G117100 Sobic003G349800--Sobic003G399400 Sobic006G108700 Sobic006G108700 Sobic003G349800--Sobic006G108700 Sobic010G161900 Sobic010G161900 Sobic003G320500--Sobic010G161900 Sobic005G130700 Sobic005G130700 Sobic003G320500--Sobic005G130700 SobicK009800 SobicK009800 Sobic003G320500--SobicK009800 Sobic006G062300 Sobic006G062300 Sobic003G320500--Sobic006G062300 Sobic003G320500--Sobic001G258100 Sobic007G103800 Sobic007G103800 Sobic003G320500--Sobic007G103800 Sobic001G451800 Sobic001G451800 Sobic003G320500--Sobic001G451800 Sobic010G116100 Sobic010G116100 Sobic003G320500--Sobic010G116100 Sobic005G110600 Sobic005G110600 Sobic003G320500--Sobic005G110600
Octagon: transcription factors


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