Gene annotation
Transcriptome id Sobic.001G375900.2
Synonym Sb01g035700, PPAN
Functional annotation Brix domain containing protein, putative, expressed
UniProt A0A1Z5S9K1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g22350.1 : Brix domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a002398
Brachypodium KQK21747
Barley HORVU4Hr1G046720.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G349800 domain of unknown function DUF966 domain containing protein, expressed -
2 Sobic.009G159600 ATROPGEF7/ROPGEF7, putative, expressed -
3 Sobic.004G225400 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
4 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
5 Sobic.003G399400 expressed protein -
6 Sobic.005G117100 expressed protein -
7 Sobic.001G511200 expressed protein -
8 Sobic.004G180400 remorin family protein, putative, expressed -
9 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
10 Sobic.006G108700 atypical receptor-like kinase MARK, putative, expressed -
11 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
12 Sobic.007G085350 - -
13 Sobic.007G169000 similar to Putative uncharacterized protein P0562A06.5(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.002G219500 ATPase, putative, expressed -
15 Sobic.001G267266 - -
16 Sobic.006G053800 LGC1, putative, expressed -
17 Sobic.006G069500 glutaredoxin, putative, expressed -
18 Sobic.004G259101 - -
19 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -
20 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic001G375900 Sobic001G375900 Sobic003G349800 Sobic003G349800 Sobic001G375900--Sobic003G349800 Sobic009G159600 Sobic009G159600 Sobic001G375900--Sobic009G159600 Sobic004G225400 Sobic004G225400 Sobic001G375900--Sobic004G225400 Sobic009G178900 Sobic009G178900 Sobic001G375900--Sobic009G178900 Sobic003G399400 Sobic003G399400 Sobic001G375900--Sobic003G399400 Sobic005G117100 Sobic005G117100 Sobic001G375900--Sobic005G117100 Sobic001G511200 Sobic001G511200 Sobic001G375900--Sobic001G511200 Sobic004G180400 Sobic004G180400 Sobic001G375900--Sobic004G180400 Sobic006G271100 Sobic006G271100 Sobic001G375900--Sobic006G271100 Sobic003G349800--Sobic009G159600 Sobic003G349800--Sobic004G225400 Sobic002G219500 Sobic002G219500 Sobic003G349800--Sobic002G219500 Sobic003G349800--Sobic001G375900 Sobic003G048700 Sobic003G048700 Sobic003G349800--Sobic003G048700 Sobic004G259101 Sobic004G259101 Sobic003G349800--Sobic004G259101 Sobic003G349800--Sobic005G117100 Sobic003G349800--Sobic003G399400 Sobic006G108700 Sobic006G108700 Sobic003G349800--Sobic006G108700 Sobic009G159600--Sobic004G259101 Sobic009G159600--Sobic003G349800 Sobic009G159600--Sobic003G399400 Sobic009G159600--Sobic002G219500 Sobic001G258100 Sobic001G258100 Sobic009G159600--Sobic001G258100 Sobic009G159600--Sobic004G225400 Sobic002G004500 Sobic002G004500 Sobic009G159600--Sobic002G004500 Sobic001G026700 Sobic001G026700 Sobic009G159600--Sobic001G026700 Sobic003G174900 Sobic003G174900 Sobic009G159600--Sobic003G174900 Sobic006G228100 Sobic006G228100 Sobic004G225400--Sobic006G228100 Sobic001G530300 Sobic001G530300 Sobic004G225400--Sobic001G530300 Sobic004G225400--Sobic006G271100 Sobic009G070000 Sobic009G070000 Sobic004G225400--Sobic009G070000 Sobic004G225400--Sobic002G219500 Sobic007G017900 Sobic007G017900 Sobic004G225400--Sobic007G017900 Sobic004G225400--Sobic002G004500 Sobic001G399400 Sobic001G399400 Sobic004G225400--Sobic001G399400 Sobic005G111600 Sobic005G111600 Sobic004G225400--Sobic005G111600 Sobic009G178900--Sobic001G511200 Sobic006G069500 Sobic006G069500 Sobic009G178900--Sobic006G069500 Sobic003G273800 Sobic003G273800 Sobic009G178900--Sobic003G273800 Sobic009G178900--Sobic004G180400 Sobic003G364700 Sobic003G364700 Sobic009G178900--Sobic003G364700 Sobic009G233600 Sobic009G233600 Sobic009G178900--Sobic009G233600 Sobic004G077100 Sobic004G077100 Sobic009G178900--Sobic004G077100 Sobic005G016300 Sobic005G016300 Sobic009G178900--Sobic005G016300 Sobic009G178900--Sobic006G271100 Sobic003G399400--Sobic002G004500 Sobic003G399400--Sobic002G219500 Sobic003G184500 Sobic003G184500 Sobic003G399400--Sobic003G184500 Sobic003G399400--Sobic006G108700 Sobic003G399400--Sobic006G271100 Sobic003G399400--Sobic009G159600 Sobic003G399400--Sobic001G399400 Sobic001G451800 Sobic001G451800 Sobic003G399400--Sobic001G451800 Sobic003G399400--Sobic005G016300 Sobic003G290600 Sobic003G290600 Sobic005G117100--Sobic003G290600 Sobic006G073150 Sobic006G073150 Sobic005G117100--Sobic006G073150 Sobic005G117100--Sobic009G159600 Sobic005G117100--Sobic004G259101 Sobic001G267266 Sobic001G267266 Sobic005G117100--Sobic001G267266 Sobic001G339400 Sobic001G339400 Sobic005G117100--Sobic001G339400 Sobic003G029300 Sobic003G029300 Sobic005G117100--Sobic003G029300 Sobic005G117100--Sobic003G349800 Sobic003G320500 Sobic003G320500 Sobic005G117100--Sobic003G320500 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic009G229100 Sobic009G229100 Sobic001G511200--Sobic009G229100 Sobic001G511200--Sobic003G273800 Sobic001G511200--Sobic009G178900 Sobic002G356700 Sobic002G356700 Sobic001G511200--Sobic002G356700 Sobic001G511200--Sobic009G233600 Sobic008G127200 Sobic008G127200 Sobic001G511200--Sobic008G127200 Sobic003G201300 Sobic003G201300 Sobic001G511200--Sobic003G201300 Sobic004G180400--Sobic006G069500 Sobic009G233500 Sobic009G233500 Sobic004G180400--Sobic009G233500 Sobic004G180400--Sobic004G077100 Sobic004G180400--Sobic001G511200 Sobic004G180400--Sobic003G273800 Sobic004G180400--Sobic009G178900 Sobic001G533200 Sobic001G533200 Sobic004G180400--Sobic001G533200 Sobic001G075400 Sobic001G075400 Sobic004G180400--Sobic001G075400 Sobic005G210600 Sobic005G210600 Sobic004G180400--Sobic005G210600 Sobic006G271100--Sobic009G070000 Sobic003G047300 Sobic003G047300 Sobic006G271100--Sobic003G047300 Sobic006G271100--Sobic006G228100 Sobic006G271100--Sobic001G399400 Sobic004G049800 Sobic004G049800 Sobic006G271100--Sobic004G049800 Sobic006G271100--Sobic001G511200 Sobic006G271100--Sobic003G184500 Sobic006G271100--Sobic009G229100 Sobic006G271100--Sobic002G219500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.