Gene annotation
Transcriptome id Sobic.005G208100.1
Synonym Sb05g026185
Functional annotation protein kinase domain containing protein, expressed
UniProt C5Y7H4
Pfam PF00069
Panther DB PTHR27002 PTHR27002:SF145
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04733; interleukin-1 receptor-associated kinase 4
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G61480 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os12g14699.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G184000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
2 Sobic.010G170500 Leucine Rich Repeat family protein, expressed -
3 Sobic.009G003900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
4 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
5 Sobic.003G167500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
6 Sobic.001G058100 thioredoxin, putative, expressed -
7 Sobic.001G337350 - -
8 Sobic.004G204900 glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
9 Sobic.001G196300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
10 Sobic.009G210600 GTPase-activating protein, putative, expressed -
11 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
12 Sobic.002G310500 chalcone synthase, putative, expressed -
13 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
14 Sobic.004G167400 expressed protein -
15 Sobic.009G210300 similar to Calcium sensing protein(PubMedID : 29862293)@Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
16 Sobic.010G072000 "s cinnamyl alcohol dehydrogenases, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
17 Sobic.002G166900 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
18 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
19 Sobic.004G304100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
20 Sobic.002G057300 expressed protein -


Gene co-expression network
sample Sobic005G208100 Sobic005G208100 Sobic001G184000 Sobic001G184000 Sobic005G208100--Sobic001G184000 Sobic010G170500 Sobic010G170500 Sobic005G208100--Sobic010G170500 Sobic009G003900 Sobic009G003900 Sobic005G208100--Sobic009G003900 Sobic002G153500 Sobic002G153500 Sobic005G208100--Sobic002G153500 Sobic003G167500 Sobic003G167500 Sobic005G208100--Sobic003G167500 Sobic001G058100 Sobic001G058100 Sobic005G208100--Sobic001G058100 Sobic001G337350 Sobic001G337350 Sobic005G208100--Sobic001G337350 Sobic004G204900 Sobic004G204900 Sobic005G208100--Sobic004G204900 Sobic001G196300 Sobic001G196300 Sobic005G208100--Sobic001G196300 Sobic001G184000--Sobic009G003900 Sobic003G075500 Sobic003G075500 Sobic001G184000--Sobic003G075500 Sobic010G176700 Sobic010G176700 Sobic001G184000--Sobic010G176700 Sobic004G277000 Sobic004G277000 Sobic001G184000--Sobic004G277000 Sobic002G249000 Sobic002G249000 Sobic001G184000--Sobic002G249000 Sobic001G010400 Sobic001G010400 Sobic001G184000--Sobic001G010400 Sobic010G224200 Sobic010G224200 Sobic001G184000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic001G184000--Sobic005G117400 Sobic006G264300 Sobic006G264300 Sobic001G184000--Sobic006G264300 Sobic010G170500--Sobic001G337350 Sobic001G337300 Sobic001G337300 Sobic010G170500--Sobic001G337300 Sobic009G106800 Sobic009G106800 Sobic010G170500--Sobic009G106800 Sobic002G368500 Sobic002G368500 Sobic010G170500--Sobic002G368500 Sobic001G100700 Sobic001G100700 Sobic010G170500--Sobic001G100700 Sobic004G333150 Sobic004G333150 Sobic010G170500--Sobic004G333150 Sobic005G092900 Sobic005G092900 Sobic010G170500--Sobic005G092900 Sobic007G148000 Sobic007G148000 Sobic010G170500--Sobic007G148000 Sobic004G304300 Sobic004G304300 Sobic010G170500--Sobic004G304300 Sobic009G003900--Sobic004G277000 Sobic009G003900--Sobic002G249000 Sobic004G050000 Sobic004G050000 Sobic009G003900--Sobic004G050000 Sobic009G003900--Sobic005G117400 Sobic002G264400 Sobic002G264400 Sobic009G003900--Sobic002G264400 Sobic009G003900--Sobic001G184000 Sobic002G090200 Sobic002G090200 Sobic009G003900--Sobic002G090200 Sobic002G180600 Sobic002G180600 Sobic009G003900--Sobic002G180600 Sobic010G072000 Sobic010G072000 Sobic009G003900--Sobic010G072000 Sobic001G224400 Sobic001G224400 Sobic002G153500--Sobic001G224400 Sobic008G189300 Sobic008G189300 Sobic002G153500--Sobic008G189300 Sobic004G284500 Sobic004G284500 Sobic002G153500--Sobic004G284500 Sobic004G272800 Sobic004G272800 Sobic002G153500--Sobic004G272800 Sobic004G225500 Sobic004G225500 Sobic002G153500--Sobic004G225500 Sobic001G132100 Sobic001G132100 Sobic002G153500--Sobic001G132100 Sobic008G032100 Sobic008G032100 Sobic002G153500--Sobic008G032100 Sobic007G115100 Sobic007G115100 Sobic002G153500--Sobic007G115100 Sobic002G153500--Sobic004G204900 Sobic002G242500 Sobic002G242500 Sobic003G167500--Sobic002G242500 Sobic003G167500--Sobic001G196300 Sobic009G236200 Sobic009G236200 Sobic003G167500--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic003G167500--Sobic002G355200 Sobic009G167700 Sobic009G167700 Sobic003G167500--Sobic009G167700 Sobic003G167500--Sobic001G010400 Sobic001G049200 Sobic001G049200 Sobic003G167500--Sobic001G049200 Sobic010G161450 Sobic010G161450 Sobic003G167500--Sobic010G161450 Sobic010G016400 Sobic010G016400 Sobic003G167500--Sobic010G016400 Sobic001G236300 Sobic001G236300 Sobic001G058100--Sobic001G236300 Sobic004G335000 Sobic004G335000 Sobic001G058100--Sobic004G335000 Sobic002G257400 Sobic002G257400 Sobic001G058100--Sobic002G257400 Sobic006G252200 Sobic006G252200 Sobic001G058100--Sobic006G252200 Sobic010G044200 Sobic010G044200 Sobic001G058100--Sobic010G044200 Sobic001G289400 Sobic001G289400 Sobic001G058100--Sobic001G289400 Sobic003G104700 Sobic003G104700 Sobic001G058100--Sobic003G104700 Sobic006G220900 Sobic006G220900 Sobic001G058100--Sobic006G220900 Sobic002G083266 Sobic002G083266 Sobic001G058100--Sobic002G083266 Sobic001G337350--Sobic010G170500 Sobic001G337350--Sobic001G337300 Sobic002G310500 Sobic002G310500 Sobic001G337350--Sobic002G310500 Sobic001G337350--Sobic005G208100 Sobic001G337350--Sobic007G148000 Sobic001G337350--Sobic001G184000 Sobic004G181800 Sobic004G181800 Sobic001G337350--Sobic004G181800 Sobic008G140300 Sobic008G140300 Sobic001G337350--Sobic008G140300 Sobic001G337350--Sobic004G304300 Sobic004G204900--Sobic002G153500 Sobic004G204900--Sobic008G189300 Sobic002G155500 Sobic002G155500 Sobic004G204900--Sobic002G155500 Sobic004G204900--Sobic004G225500 Sobic001G459500 Sobic001G459500 Sobic004G204900--Sobic001G459500 Sobic003G367451 Sobic003G367451 Sobic004G204900--Sobic003G367451 Sobic004G204900--Sobic004G272800 Sobic003G323600 Sobic003G323600 Sobic004G204900--Sobic003G323600 Sobic007G114200 Sobic007G114200 Sobic004G204900--Sobic007G114200 Sobic001G196300--Sobic003G167500 Sobic001G196300--Sobic002G242500 Sobic001G196300--Sobic001G010400 Sobic001G196300--Sobic002G153500 Sobic009G111600 Sobic009G111600 Sobic001G196300--Sobic009G111600 Sobic002G196100 Sobic002G196100 Sobic001G196300--Sobic002G196100 Sobic001G196300--Sobic002G249000 Sobic001G196300--Sobic004G284500 Sobic009G241700 Sobic009G241700 Sobic001G196300--Sobic009G241700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.