Gene annotation
Transcriptome id Sobic.006G031833.1,Sobic.006G031833.2,Sobic.006G031833.3
Synonym -
Functional annotation -
UniProt A0A1Z5RCR3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G324300 tyrosyl-DNA phosphodiesterase 1, putative, expressed K10862: tyrosyl-DNA phosphodiesterase 1
2 Sobic.010G154600 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
3 Sobic.004G069000 expressed protein -
4 Sobic.003G426700 expressed protein -
5 Sobic.001G062900 peptidase, putative, expressed K01301: N-acetylated-alpha-linked acidic dipeptidase
6 Sobic.007G031900 OsFBX207 - F-box domain containing protein, expressed -
7 Sobic.002G324400 PPDK-RP(PubMedID : 19549309)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
8 Sobic.002G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.010G254300 Myb-like DNA-binding domain containing protein, putative, expressed -
10 Sobic.009G192800 tRNA methyltran, putative, expressed -
11 Sobic.003G391600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding domain containing protein, expressed -
12 Sobic.002G408100 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
13 Sobic.004G324700 - -
14 Sobic.004G270600 MYB family transcription factor, putative, expressed -
15 Sobic.003G418100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
16 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
17 Sobic.001G528800 cell cycle control protein, putative, expressed -
18 Sobic.010G239900 "Causal gene for dwf1-1 with poor pollen viability and dwarfed growth form, "(PubMedID : 26198258)@2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein(PubMedID : 28640841)@oxidoreductase, putative, expressed -
19 Sobic.003G433200 BAS1, putative, expressed -
20 Sobic.002G237900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLE6 - cellulose synthase-like family E, expressed -


Gene co-expression network
sample Sobic006G031833 Sobic006G031833 Sobic002G324300 Sobic002G324300 Sobic006G031833--Sobic002G324300 Sobic010G154600 Sobic010G154600 Sobic006G031833--Sobic010G154600 Sobic004G069000 Sobic004G069000 Sobic006G031833--Sobic004G069000 Sobic003G426700 Sobic003G426700 Sobic006G031833--Sobic003G426700 Sobic001G062900 Sobic001G062900 Sobic006G031833--Sobic001G062900 Sobic007G031900 Sobic007G031900 Sobic006G031833--Sobic007G031900 Sobic002G324400 Sobic002G324400 Sobic006G031833--Sobic002G324400 Sobic002G049600 Sobic002G049600 Sobic006G031833--Sobic002G049600 Sobic010G254300 Sobic010G254300 Sobic006G031833--Sobic010G254300 Sobic005G066900 Sobic005G066900 Sobic002G324300--Sobic005G066900 Sobic002G324300--Sobic006G031833 Sobic002G399800 Sobic002G399800 Sobic002G324300--Sobic002G399800 Sobic008G140700 Sobic008G140700 Sobic002G324300--Sobic008G140700 Sobic007G097400 Sobic007G097400 Sobic002G324300--Sobic007G097400 Sobic001G340000 Sobic001G340000 Sobic002G324300--Sobic001G340000 Sobic006G029100 Sobic006G029100 Sobic002G324300--Sobic006G029100 Sobic002G318800 Sobic002G318800 Sobic002G324300--Sobic002G318800 Sobic002G308700 Sobic002G308700 Sobic002G324300--Sobic002G308700 Sobic010G154600--Sobic006G031833 Sobic010G154600--Sobic010G254300 Sobic004G131600 Sobic004G131600 Sobic010G154600--Sobic004G131600 Sobic003G158900 Sobic003G158900 Sobic010G154600--Sobic003G158900 Sobic002G232200 Sobic002G232200 Sobic010G154600--Sobic002G232200 Sobic010G154600--Sobic002G324400 Sobic004G165500 Sobic004G165500 Sobic010G154600--Sobic004G165500 Sobic004G270600 Sobic004G270600 Sobic010G154600--Sobic004G270600 Sobic008G026700 Sobic008G026700 Sobic010G154600--Sobic008G026700 Sobic003G271400 Sobic003G271400 Sobic004G069000--Sobic003G271400 Sobic001G528800 Sobic001G528800 Sobic004G069000--Sobic001G528800 Sobic001G345100 Sobic001G345100 Sobic004G069000--Sobic001G345100 Sobic008G033000 Sobic008G033000 Sobic004G069000--Sobic008G033000 Sobic005G206500 Sobic005G206500 Sobic004G069000--Sobic005G206500 Sobic010G085100 Sobic010G085100 Sobic004G069000--Sobic010G085100 Sobic007G136200 Sobic007G136200 Sobic004G069000--Sobic007G136200 Sobic001G536700 Sobic001G536700 Sobic004G069000--Sobic001G536700 Sobic001G378100 Sobic001G378100 Sobic004G069000--Sobic001G378100 Sobic003G426700--Sobic002G049600 Sobic003G342100 Sobic003G342100 Sobic003G426700--Sobic003G342100 Sobic003G426700--Sobic001G062900 Sobic001G105200 Sobic001G105200 Sobic003G426700--Sobic001G105200 Sobic006G064100 Sobic006G064100 Sobic003G426700--Sobic006G064100 Sobic001G073900 Sobic001G073900 Sobic003G426700--Sobic001G073900 Sobic008G033200 Sobic008G033200 Sobic003G426700--Sobic008G033200 Sobic010G205100 Sobic010G205100 Sobic003G426700--Sobic010G205100 Sobic003G426700--Sobic002G232200 Sobic007G090403 Sobic007G090403 Sobic001G062900--Sobic007G090403 Sobic001G062900--Sobic003G342100 Sobic009G215500 Sobic009G215500 Sobic001G062900--Sobic009G215500 Sobic001G062900--Sobic001G073900 Sobic001G530900 Sobic001G530900 Sobic001G062900--Sobic001G530900 Sobic001G531500 Sobic001G531500 Sobic001G062900--Sobic001G531500 Sobic003G332700 Sobic003G332700 Sobic001G062900--Sobic003G332700 Sobic001G062900--Sobic001G105200 Sobic005G001700 Sobic005G001700 Sobic001G062900--Sobic005G001700 Sobic002G211800 Sobic002G211800 Sobic007G031900--Sobic002G211800 Sobic001G111850 Sobic001G111850 Sobic007G031900--Sobic001G111850 Sobic006G216100 Sobic006G216100 Sobic007G031900--Sobic006G216100 Sobic003G166750 Sobic003G166750 Sobic007G031900--Sobic003G166750 Sobic009G201300 Sobic009G201300 Sobic007G031900--Sobic009G201300 Sobic004G244900 Sobic004G244900 Sobic007G031900--Sobic004G244900 Sobic006G252900 Sobic006G252900 Sobic007G031900--Sobic006G252900 Sobic001G457800 Sobic001G457800 Sobic007G031900--Sobic001G457800 Sobic006G050700 Sobic006G050700 Sobic007G031900--Sobic006G050700 Sobic001G540600 Sobic001G540600 Sobic002G324400--Sobic001G540600 Sobic002G206300 Sobic002G206300 Sobic002G324400--Sobic002G206300 Sobic003G233700 Sobic003G233700 Sobic002G324400--Sobic003G233700 Sobic001G217900 Sobic001G217900 Sobic002G324400--Sobic001G217900 Sobic004G179400 Sobic004G179400 Sobic002G324400--Sobic004G179400 Sobic009G132000 Sobic009G132000 Sobic002G324400--Sobic009G132000 Sobic002G324400--Sobic008G033000 Sobic002G028400 Sobic002G028400 Sobic002G324400--Sobic002G028400 Sobic005G063000 Sobic005G063000 Sobic002G324400--Sobic005G063000 Sobic002G049600--Sobic001G073900 Sobic002G049600--Sobic008G033200 Sobic008G117000 Sobic008G117000 Sobic002G049600--Sobic008G117000 Sobic003G036200 Sobic003G036200 Sobic002G049600--Sobic003G036200 Sobic002G049600--Sobic003G332700 Sobic002G049600--Sobic003G426700 Sobic001G261408 Sobic001G261408 Sobic002G049600--Sobic001G261408 Sobic009G242100 Sobic009G242100 Sobic002G049600--Sobic009G242100 Sobic002G049600--Sobic003G342100 Sobic010G254300--Sobic004G165500 Sobic001G540300 Sobic001G540300 Sobic010G254300--Sobic001G540300 Sobic009G256100 Sobic009G256100 Sobic010G254300--Sobic009G256100 Sobic004G317500 Sobic004G317500 Sobic010G254300--Sobic004G317500 Sobic002G390100 Sobic002G390100 Sobic010G254300--Sobic002G390100 Sobic010G249700 Sobic010G249700 Sobic010G254300--Sobic010G249700 Sobic001G446100 Sobic001G446100 Sobic010G254300--Sobic001G446100 Sobic001G043000 Sobic001G043000 Sobic010G254300--Sobic001G043000 Sobic001G073300 Sobic001G073300 Sobic010G254300--Sobic001G073300
Octagon: transcription factors


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