Gene annotation
Transcriptome id Sobic.003G433200.2,Sobic.003G433200.1
Synonym Sb03g046460
Functional annotation BAS1, putative, expressed
UniProt A0A1W0W1F9 , A0A1B6Q8C5
Pfam PF12695
Panther DB PTHR13390 PTHR13390:SF0
NCBI CDD KOG3975; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11620 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g72870.3,LOC_Os01g72870.2 : BAS1, putative, expressed
MaizeGDB (Corn) Zm00025a039083
Brachypodium -
Barley HORVU6Hr1G058920.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G288700 armadillo/beta-catenin-like repeat containing protein, expressed -
2 Sobic.010G239900 "Causal gene for dwf1-1 with poor pollen viability and dwarfed growth form, "(PubMedID : 26198258)@2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein(PubMedID : 28640841)@oxidoreductase, putative, expressed -
3 Sobic.009G255700 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
4 Sobic.004G244900 expressed protein -
5 Sobic.001G145000 expressed protein K14376: poly(A) polymerase
6 Sobic.004G185800 expressed protein -
7 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.007G031900 OsFBX207 - F-box domain containing protein, expressed -
9 Sobic.009G185700 mutS domain V family protein, expressed K08741: DNA mismatch repair protein MSH5
10 Sobic.005G167700 protein phosphatase 2C, putative, expressed -
11 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
12 Sobic.004G334300 ATMAK10, putative, expressed -
13 Sobic.003G296900 expressed protein -
14 Sobic.002G325300 acyltransferase, putative, expressed K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4
15 Sobic.006G127600 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
16 Sobic.004G240400 tRNA synthetase, putative, expressed -
17 Sobic.003G441900 Leucine Rich Repeat family protein, expressed -
18 Sobic.008G054000 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
19 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
20 Sobic.001G451450 - -


Gene co-expression network
sample Sobic003G433200 Sobic003G433200 Sobic001G288700 Sobic001G288700 Sobic003G433200--Sobic001G288700 Sobic010G239900 Sobic010G239900 Sobic003G433200--Sobic010G239900 Sobic009G255700 Sobic009G255700 Sobic003G433200--Sobic009G255700 Sobic004G244900 Sobic004G244900 Sobic003G433200--Sobic004G244900 Sobic001G145000 Sobic001G145000 Sobic003G433200--Sobic001G145000 Sobic004G185800 Sobic004G185800 Sobic003G433200--Sobic004G185800 Sobic003G119600 Sobic003G119600 Sobic003G433200--Sobic003G119600 Sobic007G031900 Sobic007G031900 Sobic003G433200--Sobic007G031900 Sobic009G185700 Sobic009G185700 Sobic003G433200--Sobic009G185700 Sobic001G288700--Sobic003G433200 Sobic001G288700--Sobic009G255700 Sobic001G288700--Sobic004G244900 Sobic001G288700--Sobic004G185800 Sobic004G263400 Sobic004G263400 Sobic001G288700--Sobic004G263400 Sobic006G216100 Sobic006G216100 Sobic001G288700--Sobic006G216100 Sobic001G288700--Sobic001G145000 Sobic006G093300 Sobic006G093300 Sobic001G288700--Sobic006G093300 Sobic001G192000 Sobic001G192000 Sobic001G288700--Sobic001G192000 Sobic003G264100 Sobic003G264100 Sobic010G239900--Sobic003G264100 Sobic010G239900--Sobic003G433200 Sobic010G239900--Sobic004G244900 Sobic001G457800 Sobic001G457800 Sobic010G239900--Sobic001G457800 Sobic010G239900--Sobic003G119600 Sobic002G325300 Sobic002G325300 Sobic010G239900--Sobic002G325300 Sobic003G311900 Sobic003G311900 Sobic010G239900--Sobic003G311900 Sobic009G201300 Sobic009G201300 Sobic010G239900--Sobic009G201300 Sobic001G333100 Sobic001G333100 Sobic010G239900--Sobic001G333100 Sobic009G255700--Sobic001G192000 Sobic008G088872 Sobic008G088872 Sobic009G255700--Sobic008G088872 Sobic002G275700 Sobic002G275700 Sobic009G255700--Sobic002G275700 Sobic001G370900 Sobic001G370900 Sobic009G255700--Sobic001G370900 Sobic005G162500 Sobic005G162500 Sobic009G255700--Sobic005G162500 Sobic006G184900 Sobic006G184900 Sobic009G255700--Sobic006G184900 Sobic002G308700 Sobic002G308700 Sobic009G255700--Sobic002G308700 Sobic002G335600 Sobic002G335600 Sobic009G255700--Sobic002G335600 Sobic009G255700--Sobic004G244900 Sobic004G244900--Sobic001G457800 Sobic004G334300 Sobic004G334300 Sobic004G244900--Sobic004G334300 Sobic004G244900--Sobic003G119600 Sobic003G155100 Sobic003G155100 Sobic004G244900--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic004G244900--Sobic008G001200 Sobic004G356700 Sobic004G356700 Sobic004G244900--Sobic004G356700 Sobic004G244900--Sobic009G201300 Sobic004G244900--Sobic002G275700 Sobic003G168100 Sobic003G168100 Sobic004G244900--Sobic003G168100 Sobic002G424700 Sobic002G424700 Sobic001G145000--Sobic002G424700 Sobic001G145000--Sobic004G334300 Sobic001G145000--Sobic002G275700 Sobic001G145000--Sobic004G244900 Sobic005G142800 Sobic005G142800 Sobic001G145000--Sobic005G142800 Sobic007G103100 Sobic007G103100 Sobic001G145000--Sobic007G103100 Sobic001G527800 Sobic001G527800 Sobic001G145000--Sobic001G527800 Sobic010G123600 Sobic010G123600 Sobic001G145000--Sobic010G123600 Sobic002G316600 Sobic002G316600 Sobic001G145000--Sobic002G316600 Sobic006G041600 Sobic006G041600 Sobic004G185800--Sobic006G041600 Sobic001G433800 Sobic001G433800 Sobic004G185800--Sobic001G433800 Sobic003G398700 Sobic003G398700 Sobic004G185800--Sobic003G398700 Sobic003G188400 Sobic003G188400 Sobic004G185800--Sobic003G188400 Sobic008G063300 Sobic008G063300 Sobic004G185800--Sobic008G063300 Sobic006G096900 Sobic006G096900 Sobic004G185800--Sobic006G096900 Sobic006G252900 Sobic006G252900 Sobic004G185800--Sobic006G252900 Sobic004G185800--Sobic003G168100 Sobic002G425500 Sobic002G425500 Sobic004G185800--Sobic002G425500 Sobic003G119600--Sobic009G201300 Sobic001G439300 Sobic001G439300 Sobic003G119600--Sobic001G439300 Sobic003G119600--Sobic002G325300 Sobic003G119600--Sobic004G244900 Sobic002G257750 Sobic002G257750 Sobic003G119600--Sobic002G257750 Sobic005G106600 Sobic005G106600 Sobic003G119600--Sobic005G106600 Sobic003G119600--Sobic004G356700 Sobic003G253600 Sobic003G253600 Sobic003G119600--Sobic003G253600 Sobic003G354600 Sobic003G354600 Sobic003G119600--Sobic003G354600 Sobic002G211800 Sobic002G211800 Sobic007G031900--Sobic002G211800 Sobic001G111850 Sobic001G111850 Sobic007G031900--Sobic001G111850 Sobic007G031900--Sobic006G216100 Sobic003G166750 Sobic003G166750 Sobic007G031900--Sobic003G166750 Sobic007G031900--Sobic009G201300 Sobic007G031900--Sobic004G244900 Sobic007G031900--Sobic006G252900 Sobic007G031900--Sobic001G457800 Sobic006G050700 Sobic006G050700 Sobic007G031900--Sobic006G050700 Sobic001G455600 Sobic001G455600 Sobic009G185700--Sobic001G455600 Sobic002G344000 Sobic002G344000 Sobic009G185700--Sobic002G344000 Sobic004G134200 Sobic004G134200 Sobic009G185700--Sobic004G134200 Sobic009G185700--Sobic002G425500 Sobic003G441900 Sobic003G441900 Sobic009G185700--Sobic003G441900 Sobic009G185700--Sobic005G142800 Sobic009G185700--Sobic002G211800 Sobic003G077700 Sobic003G077700 Sobic009G185700--Sobic003G077700 Sobic009G215500 Sobic009G215500 Sobic009G185700--Sobic009G215500
Octagon: transcription factors


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