Gene annotation
Transcriptome id Sobic.006G034400.1
Synonym Sb06g004290
Functional annotation amine oxidase precursor, putative, expressed
UniProt C5YDD2
Pfam PF02727 PF02728 PF01179
Panther DB PTHR10638 PTHR10638:SF39
NCBI CDD -
KEGG Orthology K00276; AOC3, AOC2, primary-amine oxidase
Gene Ontology GO:0009308; amine metabolic process GO:0008131primary amine oxidase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT4G12290 : Copper amine oxidase family protein
RAP-DB (Rice) LOC_Os04g20164.1 : amine oxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a055714
Brachypodium KQJ81956
Barley HORVU2Hr1G012710.3 , HORVU2Hr1G012710.2 , HORVU2Hr1G012710.1 , HORVU2Hr1G012710.7 , HORVU2Hr1G012710.6 , HORVU2Hr1G012710.5 , HORVU2Hr1G012710.4
Wheat TraesCS2A02G076300 , TraesCS4D02G281700 , TraesCS2D02G075000 , TraesCS4B02G282700 , TraesCS4A02G020900 , TraesCS2B02G091300
Populus -


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cDNA sequences
Sobic.006G034400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G036500 fruit protein PKIWI502, putative, expressed -
2 Sobic.007G056600 expressed protein -
3 Sobic.003G436000 expressed protein -
4 Sobic.006G115300 amino acid transporter, putative, expressed -
5 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
6 Sobic.010G095400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@urea active transporter, putative, expressed -
7 Sobic.002G406300 nucleolar protein 5A, putative, expressed K14564: nucleolar protein 56
8 Sobic.001G457700 expressed protein -
9 Sobic.003G266900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@DNA binding protein, putative, expressed -
10 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
11 Sobic.006G174975 - -
12 Sobic.001G532400 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
13 Sobic.002G419600 cytochrome P450, putative, expressed -
14 Sobic.007G026800 actin, putative, expressed K18584: ACTR3, actin-related protein 3
15 Sobic.003G392550 - -
16 Sobic.003G141600 - -
17 Sobic.002G290100 expressed protein K08739: DNA mismatch repair protein MLH3
18 Sobic.001G179800 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
19 Sobic.006G219900 csAtPR5, putative, expressed -
20 Sobic.004G124500 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic006G034400 Sobic006G034400 Sobic003G036500 Sobic003G036500 Sobic006G034400--Sobic003G036500 Sobic007G056600 Sobic007G056600 Sobic006G034400--Sobic007G056600 Sobic003G436000 Sobic003G436000 Sobic006G034400--Sobic003G436000 Sobic006G115300 Sobic006G115300 Sobic006G034400--Sobic006G115300 Sobic001G521500 Sobic001G521500 Sobic006G034400--Sobic001G521500 Sobic010G095400 Sobic010G095400 Sobic006G034400--Sobic010G095400 Sobic002G406300 Sobic002G406300 Sobic006G034400--Sobic002G406300 Sobic001G457700 Sobic001G457700 Sobic006G034400--Sobic001G457700 Sobic003G266900 Sobic003G266900 Sobic006G034400--Sobic003G266900 Sobic006G203300 Sobic006G203300 Sobic003G036500--Sobic006G203300 Sobic004G254800 Sobic004G254800 Sobic003G036500--Sobic004G254800 Sobic010G169900 Sobic010G169900 Sobic003G036500--Sobic010G169900 Sobic009G122500 Sobic009G122500 Sobic003G036500--Sobic009G122500 Sobic003G409900 Sobic003G409900 Sobic003G036500--Sobic003G409900 Sobic004G263500 Sobic004G263500 Sobic003G036500--Sobic004G263500 Sobic009G128500 Sobic009G128500 Sobic003G036500--Sobic009G128500 Sobic006G060000 Sobic006G060000 Sobic003G036500--Sobic006G060000 Sobic004G100200 Sobic004G100200 Sobic003G036500--Sobic004G100200 Sobic004G261600 Sobic004G261600 Sobic007G056600--Sobic004G261600 Sobic004G228800 Sobic004G228800 Sobic007G056600--Sobic004G228800 Sobic007G203300 Sobic007G203300 Sobic007G056600--Sobic007G203300 Sobic010G232600 Sobic010G232600 Sobic007G056600--Sobic010G232600 Sobic006G077300 Sobic006G077300 Sobic007G056600--Sobic006G077300 Sobic004G124500 Sobic004G124500 Sobic007G056600--Sobic004G124500 Sobic003G126300 Sobic003G126300 Sobic007G056600--Sobic003G126300 Sobic003G119700 Sobic003G119700 Sobic007G056600--Sobic003G119700 Sobic001G251200 Sobic001G251200 Sobic007G056600--Sobic001G251200 Sobic003G436000--Sobic003G036500 Sobic003G436000--Sobic002G406300 Sobic003G039900 Sobic003G039900 Sobic003G436000--Sobic003G039900 Sobic003G114400 Sobic003G114400 Sobic003G436000--Sobic003G114400 Sobic003G436000--Sobic010G169900 Sobic003G159200 Sobic003G159200 Sobic003G436000--Sobic003G159200 Sobic009G194000 Sobic009G194000 Sobic003G436000--Sobic009G194000 Sobic003G436000--Sobic006G203300 Sobic008G055500 Sobic008G055500 Sobic003G436000--Sobic008G055500 Sobic009G118600 Sobic009G118600 Sobic006G115300--Sobic009G118600 Sobic007G131700 Sobic007G131700 Sobic006G115300--Sobic007G131700 Sobic003G252400 Sobic003G252400 Sobic006G115300--Sobic003G252400 Sobic001G235500 Sobic001G235500 Sobic006G115300--Sobic001G235500 Sobic003G252300 Sobic003G252300 Sobic006G115300--Sobic003G252300 Sobic004G236550 Sobic004G236550 Sobic006G115300--Sobic004G236550 Sobic003G272400 Sobic003G272400 Sobic006G115300--Sobic003G272400 Sobic006G115300--Sobic001G521500 Sobic006G115300--Sobic003G126300 Sobic009G122325 Sobic009G122325 Sobic001G521500--Sobic009G122325 Sobic001G521500--Sobic003G252400 Sobic003G036600 Sobic003G036600 Sobic001G521500--Sobic003G036600 Sobic005G087900 Sobic005G087900 Sobic001G521500--Sobic005G087900 Sobic003G397500 Sobic003G397500 Sobic001G521500--Sobic003G397500 Sobic003G229000 Sobic003G229000 Sobic001G521500--Sobic003G229000 Sobic001G521500--Sobic006G115300 Sobic009G136100 Sobic009G136100 Sobic001G521500--Sobic009G136100 Sobic002G229600 Sobic002G229600 Sobic001G521500--Sobic002G229600 Sobic004G176200 Sobic004G176200 Sobic010G095400--Sobic004G176200 Sobic002G007800 Sobic002G007800 Sobic010G095400--Sobic002G007800 Sobic002G368100 Sobic002G368100 Sobic010G095400--Sobic002G368100 Sobic004G074900 Sobic004G074900 Sobic010G095400--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic010G095400--Sobic003G238250 Sobic007G101600 Sobic007G101600 Sobic010G095400--Sobic007G101600 Sobic008G141600 Sobic008G141600 Sobic010G095400--Sobic008G141600 Sobic010G006800 Sobic010G006800 Sobic010G095400--Sobic010G006800 Sobic002G103800 Sobic002G103800 Sobic010G095400--Sobic002G103800 Sobic002G406300--Sobic008G055500 Sobic002G406300--Sobic009G194000 Sobic002G406300--Sobic006G060000 Sobic003G402800 Sobic003G402800 Sobic002G406300--Sobic003G402800 Sobic010G091400 Sobic010G091400 Sobic002G406300--Sobic010G091400 Sobic001G532400 Sobic001G532400 Sobic002G406300--Sobic001G532400 Sobic002G057400 Sobic002G057400 Sobic002G406300--Sobic002G057400 Sobic002G406300--Sobic003G436000 Sobic001G501900 Sobic001G501900 Sobic002G406300--Sobic001G501900 Sobic002G431000 Sobic002G431000 Sobic001G457700--Sobic002G431000 Sobic004G112900 Sobic004G112900 Sobic001G457700--Sobic004G112900 Sobic001G312500 Sobic001G312500 Sobic001G457700--Sobic001G312500 Sobic001G457700--Sobic003G036500 Sobic006G217300 Sobic006G217300 Sobic001G457700--Sobic006G217300 Sobic010G184300 Sobic010G184300 Sobic001G457700--Sobic010G184300 Sobic002G295700 Sobic002G295700 Sobic001G457700--Sobic002G295700 Sobic010G042000 Sobic010G042000 Sobic001G457700--Sobic010G042000 Sobic001G214200 Sobic001G214200 Sobic001G457700--Sobic001G214200 Sobic009G153000 Sobic009G153000 Sobic003G266900--Sobic009G153000 Sobic009G208100 Sobic009G208100 Sobic003G266900--Sobic009G208100 Sobic004G004200 Sobic004G004200 Sobic003G266900--Sobic004G004200 Sobic006G126500 Sobic006G126500 Sobic003G266900--Sobic006G126500 Sobic003G266900--Sobic001G251200 Sobic001G095500 Sobic001G095500 Sobic003G266900--Sobic001G095500 Sobic003G269800 Sobic003G269800 Sobic003G266900--Sobic003G269800 Sobic007G180600 Sobic007G180600 Sobic003G266900--Sobic007G180600 Sobic003G005600 Sobic003G005600 Sobic003G266900--Sobic003G005600
Octagon: transcription factors


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