Gene annotation
Transcriptome id Sobic.006G048300.2
Synonym
Functional annotation -
UniProt A0A1B6PK81
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.006G048300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G215100 expressed protein -
2 Sobic.002G115500 PHD finger protein, putative, expressed -
3 Sobic.010G237650 - -
4 Sobic.010G074900 G protein coupled receptor, putative, expressed -
5 Sobic.003G092066 - -
6 Sobic.005G216800 RNA recognition motif containing protein, expressed -
7 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
8 Sobic.003G190300 - -
9 Sobic.005G128000 stripe rust resistance protein Yr10, putative, expressed -
10 Sobic.009G102000 OsFBX9 - F-box domain containing protein, expressed -
11 Sobic.001G247200 - -
12 Sobic.004G242700 heat shock protein DnaJ, putative, expressed -
13 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
14 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
15 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
16 Sobic.003G398400 expressed protein -
17 Sobic.004G068100 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
18 Sobic.002G033600 Leucine Rich Repeat family protein, expressed -
19 Sobic.010G073600 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@auxin response factor, putative, expressed -
20 Sobic.009G228400 lipase-related, putative, expressed -


Gene co-expression network
sample Sobic006G048300 Sobic006G048300 Sobic006G215100 Sobic006G215100 Sobic006G048300--Sobic006G215100 Sobic002G115500 Sobic002G115500 Sobic006G048300--Sobic002G115500 Sobic010G237650 Sobic010G237650 Sobic006G048300--Sobic010G237650 Sobic010G074900 Sobic010G074900 Sobic006G048300--Sobic010G074900 Sobic003G092066 Sobic003G092066 Sobic006G048300--Sobic003G092066 Sobic005G216800 Sobic005G216800 Sobic006G048300--Sobic005G216800 Sobic007G139400 Sobic007G139400 Sobic006G048300--Sobic007G139400 Sobic003G190300 Sobic003G190300 Sobic006G048300--Sobic003G190300 Sobic005G128000 Sobic005G128000 Sobic006G048300--Sobic005G128000 Sobic010G073600 Sobic010G073600 Sobic006G215100--Sobic010G073600 Sobic004G218300 Sobic004G218300 Sobic006G215100--Sobic004G218300 Sobic006G215100--Sobic010G237650 Sobic006G215100--Sobic006G048300 Sobic003G398400 Sobic003G398400 Sobic006G215100--Sobic003G398400 Sobic006G130200 Sobic006G130200 Sobic006G215100--Sobic006G130200 Sobic002G147100 Sobic002G147100 Sobic006G215100--Sobic002G147100 Sobic003G402900 Sobic003G402900 Sobic006G215100--Sobic003G402900 Sobic006G215100--Sobic010G074900 Sobic009G040800 Sobic009G040800 Sobic002G115500--Sobic009G040800 Sobic009G000400 Sobic009G000400 Sobic002G115500--Sobic009G000400 Sobic009G260650 Sobic009G260650 Sobic002G115500--Sobic009G260650 Sobic006G281700 Sobic006G281700 Sobic002G115500--Sobic006G281700 Sobic005G040900 Sobic005G040900 Sobic002G115500--Sobic005G040900 Sobic009G122500 Sobic009G122500 Sobic002G115500--Sobic009G122500 Sobic003G240700 Sobic003G240700 Sobic002G115500--Sobic003G240700 Sobic006G224300 Sobic006G224300 Sobic002G115500--Sobic006G224300 Sobic004G345400 Sobic004G345400 Sobic002G115500--Sobic004G345400 Sobic002G033600 Sobic002G033600 Sobic010G237650--Sobic002G033600 Sobic010G237650--Sobic003G092066 Sobic002G268900 Sobic002G268900 Sobic010G237650--Sobic002G268900 Sobic006G144000 Sobic006G144000 Sobic010G237650--Sobic006G144000 Sobic010G237650--Sobic007G139400 Sobic010G237650--Sobic006G215100 Sobic010G237650--Sobic010G073600 Sobic010G237650--Sobic005G128000 Sobic009G102000 Sobic009G102000 Sobic010G237650--Sobic009G102000 Sobic004G345700 Sobic004G345700 Sobic010G074900--Sobic004G345700 Sobic003G205501 Sobic003G205501 Sobic010G074900--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic010G074900--Sobic001G408700 Sobic001G193100 Sobic001G193100 Sobic010G074900--Sobic001G193100 Sobic004G084500 Sobic004G084500 Sobic010G074900--Sobic004G084500 Sobic006G091000 Sobic006G091000 Sobic010G074900--Sobic006G091000 Sobic010G074900--Sobic005G040900 Sobic004G007300 Sobic004G007300 Sobic010G074900--Sobic004G007300 Sobic010G074900--Sobic003G398400 Sobic003G092066--Sobic010G237650 Sobic009G129600 Sobic009G129600 Sobic003G092066--Sobic009G129600 Sobic003G092033 Sobic003G092033 Sobic003G092066--Sobic003G092033 Sobic003G092500 Sobic003G092500 Sobic003G092066--Sobic003G092500 Sobic003G092066--Sobic006G144000 Sobic003G092066--Sobic002G268900 Sobic003G092066--Sobic002G147100 Sobic003G092066--Sobic002G033600 Sobic003G092066--Sobic009G000400 Sobic006G237500 Sobic006G237500 Sobic005G216800--Sobic006G237500 Sobic005G123400 Sobic005G123400 Sobic005G216800--Sobic005G123400 Sobic002G342300 Sobic002G342300 Sobic005G216800--Sobic002G342300 Sobic005G216800--Sobic010G237650 Sobic002G235900 Sobic002G235900 Sobic005G216800--Sobic002G235900 Sobic005G216800--Sobic009G102000 Sobic003G397100 Sobic003G397100 Sobic005G216800--Sobic003G397100 Sobic003G194800 Sobic003G194800 Sobic005G216800--Sobic003G194800 Sobic006G170900 Sobic006G170900 Sobic005G216800--Sobic006G170900 Sobic004G347100 Sobic004G347100 Sobic007G139400--Sobic004G347100 Sobic007G139400--Sobic002G033600 Sobic007G188900 Sobic007G188900 Sobic007G139400--Sobic007G188900 Sobic007G139400--Sobic009G040800 Sobic007G088900 Sobic007G088900 Sobic007G139400--Sobic007G088900 Sobic007G139400--Sobic005G040900 Sobic002G334600 Sobic002G334600 Sobic007G139400--Sobic002G334600 Sobic007G139400--Sobic009G129600 Sobic003G354100 Sobic003G354100 Sobic007G139400--Sobic003G354100 Sobic003G190300--Sobic003G205501 Sobic003G190300--Sobic005G040900 Sobic001G296500 Sobic001G296500 Sobic003G190300--Sobic001G296500 Sobic006G072900 Sobic006G072900 Sobic003G190300--Sobic006G072900 Sobic003G205801 Sobic003G205801 Sobic003G190300--Sobic003G205801 Sobic003G190300--Sobic002G115500 Sobic004G045566 Sobic004G045566 Sobic003G190300--Sobic004G045566 Sobic008G127400 Sobic008G127400 Sobic003G190300--Sobic008G127400 Sobic001G267900 Sobic001G267900 Sobic003G190300--Sobic001G267900 Sobic002G073300 Sobic002G073300 Sobic005G128000--Sobic002G073300 Sobic005G128000--Sobic004G045566 Sobic001G261537 Sobic001G261537 Sobic005G128000--Sobic001G261537 Sobic005G099150 Sobic005G099150 Sobic005G128000--Sobic005G099150 Sobic006G067100 Sobic006G067100 Sobic005G128000--Sobic006G067100 Sobic002G182300 Sobic002G182300 Sobic005G128000--Sobic002G182300 Sobic005G128000--Sobic010G237650 Sobic010G139301 Sobic010G139301 Sobic005G128000--Sobic010G139301 Sobic008G106600 Sobic008G106600 Sobic005G128000--Sobic008G106600
Octagon: transcription factors


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