Gene annotation
Transcriptome id Sobic.001G247200.4,Sobic.001G247200.2,Sobic.001G247200.3
Synonym
Functional annotation -
UniProt A0A1Z5S765 , A0A1B6QKQ8 , A0A1Z5S7I9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
2 Sobic.004G242700 heat shock protein DnaJ, putative, expressed -
3 Sobic.006G082900 expressed protein -
4 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
5 Sobic.009G108400 CAAX amino terminal protease family protein, putative, expressed K08658: RCE1, prenyl protein peptidase
6 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
7 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
8 Sobic.002G218700 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
9 Sobic.004G232000 TLD family protein, putative, expressed -
10 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
11 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
12 Sobic.007G188900 AP2 domain containing protein, expressed -
13 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
14 Sobic.009G015800 expressed protein -
15 Sobic.004G026100 tRNA methyltransferase, putative, expressed K03439: trmB, METTL1, tRNA (guanine-N7-)-methyltransferase
16 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
17 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
18 Sobic.007G070300 OsFBL41 - F-box domain and LRR containing protein, expressed -
19 Sobic.004G069100 OsFBD6 - F-box and FBD domain containing protein, expressed -
20 Sobic.006G215100 expressed protein -


Gene co-expression network
sample Sobic001G247200 Sobic001G247200 Sobic009G040800 Sobic009G040800 Sobic001G247200--Sobic009G040800 Sobic004G242700 Sobic004G242700 Sobic001G247200--Sobic004G242700 Sobic006G082900 Sobic006G082900 Sobic001G247200--Sobic006G082900 Sobic007G139400 Sobic007G139400 Sobic001G247200--Sobic007G139400 Sobic009G108400 Sobic009G108400 Sobic001G247200--Sobic009G108400 Sobic009G030300 Sobic009G030300 Sobic001G247200--Sobic009G030300 Sobic004G061900 Sobic004G061900 Sobic001G247200--Sobic004G061900 Sobic002G218700 Sobic002G218700 Sobic001G247200--Sobic002G218700 Sobic004G232000 Sobic004G232000 Sobic001G247200--Sobic004G232000 Sobic010G278600 Sobic010G278600 Sobic009G040800--Sobic010G278600 Sobic006G091000 Sobic006G091000 Sobic009G040800--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic009G040800--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic009G040800--Sobic009G129600 Sobic001G335900 Sobic001G335900 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic009G040800--Sobic001G042200 Sobic004G353400 Sobic004G353400 Sobic009G040800--Sobic004G353400 Sobic001G049600 Sobic001G049600 Sobic004G242700--Sobic001G049600 Sobic004G242700--Sobic001G247200 Sobic004G242700--Sobic007G139400 Sobic004G242700--Sobic004G061900 Sobic006G215100 Sobic006G215100 Sobic004G242700--Sobic006G215100 Sobic007G188900 Sobic007G188900 Sobic004G242700--Sobic007G188900 Sobic002G033600 Sobic002G033600 Sobic004G242700--Sobic002G033600 Sobic010G237650 Sobic010G237650 Sobic004G242700--Sobic010G237650 Sobic007G191100 Sobic007G191100 Sobic004G242700--Sobic007G191100 Sobic002G370900 Sobic002G370900 Sobic006G082900--Sobic002G370900 Sobic003G008500 Sobic003G008500 Sobic006G082900--Sobic003G008500 Sobic006G202200 Sobic006G202200 Sobic006G082900--Sobic006G202200 Sobic004G007300 Sobic004G007300 Sobic006G082900--Sobic004G007300 Sobic004G345700 Sobic004G345700 Sobic006G082900--Sobic004G345700 Sobic006G082900--Sobic008G149800 Sobic006G173100 Sobic006G173100 Sobic006G082900--Sobic006G173100 Sobic003G401000 Sobic003G401000 Sobic006G082900--Sobic003G401000 Sobic006G195700 Sobic006G195700 Sobic006G082900--Sobic006G195700 Sobic004G347100 Sobic004G347100 Sobic007G139400--Sobic004G347100 Sobic007G139400--Sobic002G033600 Sobic007G139400--Sobic007G188900 Sobic007G139400--Sobic009G040800 Sobic007G088900 Sobic007G088900 Sobic007G139400--Sobic007G088900 Sobic007G139400--Sobic005G040900 Sobic002G334600 Sobic002G334600 Sobic007G139400--Sobic002G334600 Sobic007G139400--Sobic009G129600 Sobic003G354100 Sobic003G354100 Sobic007G139400--Sobic003G354100 Sobic009G108400--Sobic009G040800 Sobic009G108400--Sobic001G335900 Sobic009G154900 Sobic009G154900 Sobic009G108400--Sobic009G154900 Sobic001G012900 Sobic001G012900 Sobic009G108400--Sobic001G012900 Sobic009G108400--Sobic001G247200 Sobic009G108400--Sobic006G091000 Sobic003G205100 Sobic003G205100 Sobic009G108400--Sobic003G205100 Sobic004G007900 Sobic004G007900 Sobic009G108400--Sobic004G007900 Sobic010G172400 Sobic010G172400 Sobic009G108400--Sobic010G172400 Sobic002G177400 Sobic002G177400 Sobic009G030300--Sobic002G177400 Sobic001G226000 Sobic001G226000 Sobic009G030300--Sobic001G226000 Sobic009G030300--Sobic004G061900 Sobic009G044900 Sobic009G044900 Sobic009G030300--Sobic009G044900 Sobic004G013600 Sobic004G013600 Sobic009G030300--Sobic004G013600 Sobic004G088400 Sobic004G088400 Sobic009G030300--Sobic004G088400 Sobic008G117200 Sobic008G117200 Sobic009G030300--Sobic008G117200 Sobic009G030300--Sobic002G334600 Sobic008G129700 Sobic008G129700 Sobic009G030300--Sobic008G129700 Sobic004G061900--Sobic007G191100 Sobic004G061900--Sobic008G129700 Sobic006G129700 Sobic006G129700 Sobic004G061900--Sobic006G129700 Sobic004G061900--Sobic008G117200 Sobic004G061900--Sobic009G030300 Sobic004G061900--Sobic004G345700 Sobic004G061900--Sobic002G177400 Sobic001G094000 Sobic001G094000 Sobic004G061900--Sobic001G094000 Sobic004G027100 Sobic004G027100 Sobic004G061900--Sobic004G027100 Sobic003G347300 Sobic003G347300 Sobic002G218700--Sobic003G347300 Sobic010G046400 Sobic010G046400 Sobic002G218700--Sobic010G046400 Sobic002G218700--Sobic001G247200 Sobic002G218700--Sobic009G030300 Sobic010G256000 Sobic010G256000 Sobic002G218700--Sobic010G256000 Sobic003G131200 Sobic003G131200 Sobic002G218700--Sobic003G131200 Sobic004G227500 Sobic004G227500 Sobic002G218700--Sobic004G227500 Sobic009G253400 Sobic009G253400 Sobic002G218700--Sobic009G253400 Sobic004G225700 Sobic004G225700 Sobic002G218700--Sobic004G225700 Sobic001G087100 Sobic001G087100 Sobic004G232000--Sobic001G087100 Sobic007G043900 Sobic007G043900 Sobic004G232000--Sobic007G043900 Sobic004G232000--Sobic009G030300 Sobic002G076000 Sobic002G076000 Sobic004G232000--Sobic002G076000 Sobic002G259800 Sobic002G259800 Sobic004G232000--Sobic002G259800 Sobic005G084100 Sobic005G084100 Sobic004G232000--Sobic005G084100 Sobic001G043400 Sobic001G043400 Sobic004G232000--Sobic001G043400 Sobic004G232000--Sobic009G040800 Sobic005G009200 Sobic005G009200 Sobic004G232000--Sobic005G009200
Octagon: transcription factors


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