Gene annotation
Transcriptome id Sobic.004G069100.1
Synonym Sb04g005800
Functional annotation OsFBD6 - F-box and FBD domain containing protein, expressed
UniProt A0A1Z5RL77
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF115
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G69630 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os02g08160.1 : OsFBD6 - F-box and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
2 Sobic.004G232000 TLD family protein, putative, expressed -
3 Sobic.007G195400 FHA domain containing protein, putative, expressed -
4 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
5 Sobic.009G015800 expressed protein -
6 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
7 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
8 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
9 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
10 Sobic.007G000800 expressed protein -
11 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
13 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
14 Sobic.002G090800 expressed protein -
15 Sobic.002G076000 transporter-related, putative, expressed -
16 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
17 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
18 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
19 Sobic.005G009200 expressed protein -
20 Sobic.007G188900 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G069100 Sobic004G069100 Sobic009G030300 Sobic009G030300 Sobic004G069100--Sobic009G030300 Sobic004G232000 Sobic004G232000 Sobic004G069100--Sobic004G232000 Sobic007G195400 Sobic007G195400 Sobic004G069100--Sobic007G195400 Sobic007G191100 Sobic007G191100 Sobic004G069100--Sobic007G191100 Sobic009G015800 Sobic009G015800 Sobic004G069100--Sobic009G015800 Sobic008G129700 Sobic008G129700 Sobic004G069100--Sobic008G129700 Sobic004G013600 Sobic004G013600 Sobic004G069100--Sobic004G013600 Sobic005G084100 Sobic005G084100 Sobic004G069100--Sobic005G084100 Sobic004G061900 Sobic004G061900 Sobic004G069100--Sobic004G061900 Sobic002G177400 Sobic002G177400 Sobic009G030300--Sobic002G177400 Sobic001G226000 Sobic001G226000 Sobic009G030300--Sobic001G226000 Sobic009G030300--Sobic004G061900 Sobic009G044900 Sobic009G044900 Sobic009G030300--Sobic009G044900 Sobic009G030300--Sobic004G013600 Sobic004G088400 Sobic004G088400 Sobic009G030300--Sobic004G088400 Sobic008G117200 Sobic008G117200 Sobic009G030300--Sobic008G117200 Sobic002G334600 Sobic002G334600 Sobic009G030300--Sobic002G334600 Sobic009G030300--Sobic008G129700 Sobic001G087100 Sobic001G087100 Sobic004G232000--Sobic001G087100 Sobic007G043900 Sobic007G043900 Sobic004G232000--Sobic007G043900 Sobic004G232000--Sobic009G030300 Sobic002G076000 Sobic002G076000 Sobic004G232000--Sobic002G076000 Sobic002G259800 Sobic002G259800 Sobic004G232000--Sobic002G259800 Sobic004G232000--Sobic005G084100 Sobic001G043400 Sobic001G043400 Sobic004G232000--Sobic001G043400 Sobic009G040800 Sobic009G040800 Sobic004G232000--Sobic009G040800 Sobic005G009200 Sobic005G009200 Sobic004G232000--Sobic005G009200 Sobic003G359300 Sobic003G359300 Sobic007G195400--Sobic003G359300 Sobic007G195400--Sobic004G061900 Sobic008G034600 Sobic008G034600 Sobic007G195400--Sobic008G034600 Sobic007G195400--Sobic007G191100 Sobic006G129700 Sobic006G129700 Sobic007G195400--Sobic006G129700 Sobic003G093600 Sobic003G093600 Sobic007G195400--Sobic003G093600 Sobic001G216600 Sobic001G216600 Sobic007G195400--Sobic001G216600 Sobic002G058300 Sobic002G058300 Sobic007G195400--Sobic002G058300 Sobic003G115100 Sobic003G115100 Sobic007G195400--Sobic003G115100 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic007G191100--Sobic003G093600 Sobic007G191100--Sobic008G117200 Sobic005G015100 Sobic005G015100 Sobic009G015800--Sobic005G015100 Sobic009G225200 Sobic009G225200 Sobic009G015800--Sobic009G225200 Sobic009G015800--Sobic002G259800 Sobic002G158700 Sobic002G158700 Sobic009G015800--Sobic002G158700 Sobic002G421700 Sobic002G421700 Sobic009G015800--Sobic002G421700 Sobic009G015800--Sobic001G087100 Sobic009G015800--Sobic004G232000 Sobic005G015900 Sobic005G015900 Sobic009G015800--Sobic005G015900 Sobic001G315100 Sobic001G315100 Sobic009G015800--Sobic001G315100 Sobic003G336800 Sobic003G336800 Sobic008G129700--Sobic003G336800 Sobic008G129700--Sobic004G061900 Sobic002G061400 Sobic002G061400 Sobic008G129700--Sobic002G061400 Sobic008G129700--Sobic008G117200 Sobic008G129700--Sobic002G177400 Sobic007G185900 Sobic007G185900 Sobic008G129700--Sobic007G185900 Sobic008G078100 Sobic008G078100 Sobic008G129700--Sobic008G078100 Sobic003G248500 Sobic003G248500 Sobic008G129700--Sobic003G248500 Sobic008G129700--Sobic004G088400 Sobic001G056200 Sobic001G056200 Sobic004G013600--Sobic001G056200 Sobic001G028400 Sobic001G028400 Sobic004G013600--Sobic001G028400 Sobic003G354100 Sobic003G354100 Sobic004G013600--Sobic003G354100 Sobic010G211300 Sobic010G211300 Sobic004G013600--Sobic010G211300 Sobic006G248500 Sobic006G248500 Sobic004G013600--Sobic006G248500 Sobic007G205000 Sobic007G205000 Sobic004G013600--Sobic007G205000 Sobic004G013600--Sobic009G030300 Sobic003G437500 Sobic003G437500 Sobic004G013600--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic004G013600--Sobic007G118200 Sobic008G083000 Sobic008G083000 Sobic005G084100--Sobic008G083000 Sobic005G084100--Sobic002G259800 Sobic001G360900 Sobic001G360900 Sobic005G084100--Sobic001G360900 Sobic010G279700 Sobic010G279700 Sobic005G084100--Sobic010G279700 Sobic005G084100--Sobic002G076000 Sobic001G094000 Sobic001G094000 Sobic005G084100--Sobic001G094000 Sobic002G090800 Sobic002G090800 Sobic005G084100--Sobic002G090800 Sobic008G131000 Sobic008G131000 Sobic005G084100--Sobic008G131000 Sobic006G056000 Sobic006G056000 Sobic005G084100--Sobic006G056000 Sobic004G061900--Sobic007G191100 Sobic004G061900--Sobic008G129700 Sobic004G061900--Sobic006G129700 Sobic004G061900--Sobic008G117200 Sobic004G061900--Sobic009G030300 Sobic004G345700 Sobic004G345700 Sobic004G061900--Sobic004G345700 Sobic004G061900--Sobic002G177400 Sobic004G061900--Sobic001G094000 Sobic004G027100 Sobic004G027100 Sobic004G061900--Sobic004G027100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.