Gene annotation
Transcriptome id Sobic.006G063500.1
Synonym SBP1, Sb06g015100
Functional annotation protein binding protein, putative, expressed
UniProt C5YFF4
Pfam -
Panther DB PTHR10044 PTHR10044:SF137
NCBI CDD KOG1100; Predicted E3 ubiquitin ligase
KEGG Orthology K19042; E3 ubiquitin-protein ligase BOI and related proteins
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79110 : zinc ion binding
RAP-DB (Rice) LOC_Os04g33030.1 : protein binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a055976 , Zm00025a055972 , Zm00025a011607 , Zm00025a011599 , Zm00025a020494
Brachypodium KQJ99663 , KQJ82395
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G063500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
2 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
3 Sobic.004G096100 expressed protein -
4 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
5 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
6 Sobic.003G098700 expressed protein -
7 Sobic.003G270500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
8 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
9 Sobic.008G111300 transporter family protein, putative, expressed -
10 Sobic.006G127400 inactive receptor kinase At1g27190 precursor, putative, expressed -
11 Sobic.002G175900 expressed protein -
12 Sobic.003G291400 dehydrogenase, putative, expressed -
13 Sobic.008G060200 receptor-like protein kinase 5 precursor, putative, expressed -
14 Sobic.007G129201 - -
15 Sobic.003G096500 protein kinase domain containing protein, expressed -
16 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
17 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G089000 gibberellin receptor GID1L2, putative, expressed -
19 Sobic.002G001800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
20 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase


Gene co-expression network
sample Sobic006G063500 Sobic006G063500 Sobic003G402200 Sobic003G402200 Sobic006G063500--Sobic003G402200 Sobic004G019400 Sobic004G019400 Sobic006G063500--Sobic004G019400 Sobic004G096100 Sobic004G096100 Sobic006G063500--Sobic004G096100 Sobic009G205600 Sobic009G205600 Sobic006G063500--Sobic009G205600 Sobic001G201800 Sobic001G201800 Sobic006G063500--Sobic001G201800 Sobic003G098700 Sobic003G098700 Sobic006G063500--Sobic003G098700 Sobic003G270500 Sobic003G270500 Sobic006G063500--Sobic003G270500 Sobic001G315800 Sobic001G315800 Sobic006G063500--Sobic001G315800 Sobic008G111300 Sobic008G111300 Sobic006G063500--Sobic008G111300 Sobic001G145050 Sobic001G145050 Sobic003G402200--Sobic001G145050 Sobic003G402200--Sobic009G205600 Sobic004G078600 Sobic004G078600 Sobic003G402200--Sobic004G078600 Sobic003G151800 Sobic003G151800 Sobic003G402200--Sobic003G151800 Sobic001G320700 Sobic001G320700 Sobic003G402200--Sobic001G320700 Sobic003G402200--Sobic001G201800 Sobic001G427700 Sobic001G427700 Sobic003G402200--Sobic001G427700 Sobic005G089000 Sobic005G089000 Sobic003G402200--Sobic005G089000 Sobic003G402200--Sobic008G111300 Sobic005G186500 Sobic005G186500 Sobic004G019400--Sobic005G186500 Sobic007G037800 Sobic007G037800 Sobic004G019400--Sobic007G037800 Sobic004G019400--Sobic001G201800 Sobic003G096500 Sobic003G096500 Sobic004G019400--Sobic003G096500 Sobic008G060200 Sobic008G060200 Sobic004G019400--Sobic008G060200 Sobic009G202400 Sobic009G202400 Sobic004G019400--Sobic009G202400 Sobic008G060300 Sobic008G060300 Sobic004G019400--Sobic008G060300 Sobic005G193500 Sobic005G193500 Sobic004G019400--Sobic005G193500 Sobic002G108400 Sobic002G108400 Sobic004G019400--Sobic002G108400 Sobic001G102300 Sobic001G102300 Sobic004G096100--Sobic001G102300 Sobic002G001800 Sobic002G001800 Sobic004G096100--Sobic002G001800 Sobic008G152200 Sobic008G152200 Sobic004G096100--Sobic008G152200 Sobic002G371900 Sobic002G371900 Sobic004G096100--Sobic002G371900 Sobic006G279400 Sobic006G279400 Sobic004G096100--Sobic006G279400 Sobic009G034600 Sobic009G034600 Sobic004G096100--Sobic009G034600 Sobic002G281000 Sobic002G281000 Sobic004G096100--Sobic002G281000 Sobic001G452700 Sobic001G452700 Sobic004G096100--Sobic001G452700 Sobic007G191900 Sobic007G191900 Sobic004G096100--Sobic007G191900 Sobic004G217700 Sobic004G217700 Sobic009G205600--Sobic004G217700 Sobic009G205600--Sobic003G402200 Sobic002G271600 Sobic002G271600 Sobic009G205600--Sobic002G271600 Sobic001G410450 Sobic001G410450 Sobic009G205600--Sobic001G410450 Sobic007G014600 Sobic007G014600 Sobic009G205600--Sobic007G014600 Sobic004G195800 Sobic004G195800 Sobic009G205600--Sobic004G195800 Sobic002G209100 Sobic002G209100 Sobic009G205600--Sobic002G209100 Sobic006G060800 Sobic006G060800 Sobic009G205600--Sobic006G060800 Sobic004G187300 Sobic004G187300 Sobic009G205600--Sobic004G187300 Sobic001G201800--Sobic004G078600 Sobic009G115400 Sobic009G115400 Sobic001G201800--Sobic009G115400 Sobic002G423600 Sobic002G423600 Sobic001G201800--Sobic002G423600 Sobic001G012000 Sobic001G012000 Sobic001G201800--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic001G201800--Sobic009G252100 Sobic002G202700 Sobic002G202700 Sobic001G201800--Sobic002G202700 Sobic006G045000 Sobic006G045000 Sobic001G201800--Sobic006G045000 Sobic001G056400 Sobic001G056400 Sobic001G201800--Sobic001G056400 Sobic001G201800--Sobic002G108400 Sobic007G129201 Sobic007G129201 Sobic003G098700--Sobic007G129201 Sobic003G098700--Sobic009G252100 Sobic003G098700--Sobic004G195800 Sobic003G098700--Sobic007G037800 Sobic005G193600 Sobic005G193600 Sobic003G098700--Sobic005G193600 Sobic003G098700--Sobic008G060300 Sobic003G098700--Sobic001G201800 Sobic005G093300 Sobic005G093300 Sobic003G098700--Sobic005G093300 Sobic003G098700--Sobic005G193500 Sobic003G410900 Sobic003G410900 Sobic003G270500--Sobic003G410900 Sobic003G270500--Sobic003G096500 Sobic003G270500--Sobic006G060800 Sobic003G270500--Sobic008G060200 Sobic003G270500--Sobic007G129201 Sobic003G270500--Sobic008G060300 Sobic003G270500--Sobic005G186500 Sobic007G025900 Sobic007G025900 Sobic003G270500--Sobic007G025900 Sobic004G019100 Sobic004G019100 Sobic003G270500--Sobic004G019100 Sobic001G315800--Sobic001G201800 Sobic001G315800--Sobic004G078600 Sobic004G209500 Sobic004G209500 Sobic001G315800--Sobic004G209500 Sobic001G315800--Sobic006G045000 Sobic005G085500 Sobic005G085500 Sobic001G315800--Sobic005G085500 Sobic001G315800--Sobic002G209100 Sobic002G349400 Sobic002G349400 Sobic001G315800--Sobic002G349400 Sobic001G315800--Sobic002G423600 Sobic001G315800--Sobic004G195800 Sobic004G068700 Sobic004G068700 Sobic008G111300--Sobic004G068700 Sobic003G214000 Sobic003G214000 Sobic008G111300--Sobic003G214000 Sobic001G179100 Sobic001G179100 Sobic008G111300--Sobic001G179100 Sobic008G111300--Sobic004G078600 Sobic008G111300--Sobic001G201800 Sobic003G361900 Sobic003G361900 Sobic008G111300--Sobic003G361900 Sobic008G111300--Sobic001G320700 Sobic008G111300--Sobic004G209500 Sobic008G111300--Sobic003G402200
Octagon: transcription factors


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