Gene annotation
Transcriptome id Sobic.006G080900.1,Sobic.006G080900.2
Synonym Sb06g016780, NAPRT2
Functional annotation nicotinate phosphoribosyltransferase family domain containing protein, expressed
UniProt A0A1B6PKX2 , A0A1Z5RCX6
Pfam PF04095
Panther DB PTHR11098 PTHR11098:SF17
NCBI CDD KOG2511; Nicotinic acid phosphoribosyltransferase
KEGG Orthology K00763; pncB, nicotinate phosphoribosyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23420 : nicotinate phosphoribosyltransferase 2
RAP-DB (Rice) LOC_Os04g35060.1 : nicotinate phosphoribosyltransferase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056055 , Zm00025a011394
Brachypodium KQJ82635
Barley HORVU2Hr1G074990.1 , HORVU2Hr1G075010.9 , HORVU2Hr1G075010.8 , HORVU2Hr1G075010.7 , HORVU2Hr1G075010.6 , HORVU2Hr1G075010.5 , HORVU2Hr1G075010.4 , HORVU2Hr1G075010.3 , HORVU2Hr1G075010.2 , HORVU2Hr1G075010.1
Wheat TraesCS2B02G318300 , TraesCS2B02G318300 , TraesCS2B02G318300 , TraesCS2D02G301100 , TraesCS2D02G301100 , TraesCS2A02G302400
Populus PNT27091


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cDNA sequences
Sobic.006G080900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
2 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
3 Sobic.001G003000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
4 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
5 Sobic.009G193700 transmembrane protein 56, putative, expressed -
6 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
7 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
8 Sobic.008G044000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
9 Sobic.001G350700 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
10 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
11 Sobic.004G341200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
12 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
13 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
14 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
15 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
16 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
17 Sobic.003G005600 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
18 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
20 Sobic.001G512800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase


Gene co-expression network
sample Sobic006G080900 Sobic006G080900 Sobic010G107000 Sobic010G107000 Sobic006G080900--Sobic010G107000 Sobic001G217400 Sobic001G217400 Sobic006G080900--Sobic001G217400 Sobic001G003000 Sobic001G003000 Sobic006G080900--Sobic001G003000 Sobic003G219600 Sobic003G219600 Sobic006G080900--Sobic003G219600 Sobic009G193700 Sobic009G193700 Sobic006G080900--Sobic009G193700 Sobic009G029600 Sobic009G029600 Sobic006G080900--Sobic009G029600 Sobic006G271200 Sobic006G271200 Sobic006G080900--Sobic006G271200 Sobic008G044000 Sobic008G044000 Sobic006G080900--Sobic008G044000 Sobic001G350700 Sobic001G350700 Sobic006G080900--Sobic001G350700 Sobic009G211400 Sobic009G211400 Sobic010G107000--Sobic009G211400 Sobic001G325200 Sobic001G325200 Sobic010G107000--Sobic001G325200 Sobic010G107000--Sobic009G193700 Sobic003G355600 Sobic003G355600 Sobic010G107000--Sobic003G355600 Sobic010G107000--Sobic003G219600 Sobic001G150200 Sobic001G150200 Sobic010G107000--Sobic001G150200 Sobic010G107000--Sobic009G029600 Sobic009G226300 Sobic009G226300 Sobic010G107000--Sobic009G226300 Sobic003G138200 Sobic003G138200 Sobic010G107000--Sobic003G138200 Sobic010G072400 Sobic010G072400 Sobic001G217400--Sobic010G072400 Sobic001G350900 Sobic001G350900 Sobic001G217400--Sobic001G350900 Sobic001G217400--Sobic001G350700 Sobic004G211900 Sobic004G211900 Sobic001G217400--Sobic004G211900 Sobic003G269800 Sobic003G269800 Sobic001G217400--Sobic003G269800 Sobic003G320700 Sobic003G320700 Sobic001G217400--Sobic003G320700 Sobic007G210500 Sobic007G210500 Sobic001G217400--Sobic007G210500 Sobic003G101850 Sobic003G101850 Sobic001G217400--Sobic003G101850 Sobic001G217400--Sobic006G271200 Sobic001G003000--Sobic006G271200 Sobic001G089800 Sobic001G089800 Sobic001G003000--Sobic001G089800 Sobic009G126900 Sobic009G126900 Sobic001G003000--Sobic009G126900 Sobic004G102400 Sobic004G102400 Sobic001G003000--Sobic004G102400 Sobic006G237900 Sobic006G237900 Sobic001G003000--Sobic006G237900 Sobic003G005600 Sobic003G005600 Sobic001G003000--Sobic003G005600 Sobic010G043400 Sobic010G043400 Sobic001G003000--Sobic010G043400 Sobic001G003000--Sobic009G193700 Sobic001G003000--Sobic001G350700 Sobic003G219600--Sobic009G211400 Sobic003G219600--Sobic009G029600 Sobic003G259200 Sobic003G259200 Sobic003G219600--Sobic003G259200 Sobic009G054500 Sobic009G054500 Sobic003G219600--Sobic009G054500 Sobic005G018500 Sobic005G018500 Sobic003G219600--Sobic005G018500 Sobic004G255000 Sobic004G255000 Sobic003G219600--Sobic004G255000 Sobic001G249300 Sobic001G249300 Sobic003G219600--Sobic001G249300 Sobic004G260000 Sobic004G260000 Sobic003G219600--Sobic004G260000 Sobic003G219600--Sobic009G226300 Sobic009G193700--Sobic010G107000 Sobic008G062200 Sobic008G062200 Sobic009G193700--Sobic008G062200 Sobic009G193700--Sobic009G211400 Sobic009G193700--Sobic003G355600 Sobic009G193700--Sobic009G029600 Sobic009G193700--Sobic004G260000 Sobic009G193700--Sobic003G219600 Sobic006G199000 Sobic006G199000 Sobic009G193700--Sobic006G199000 Sobic009G193700--Sobic001G089800 Sobic009G029600--Sobic004G255000 Sobic001G280200 Sobic001G280200 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic009G029600--Sobic001G249300 Sobic009G029600--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic009G029600--Sobic006G030700 Sobic009G029600--Sobic009G054500 Sobic002G215800 Sobic002G215800 Sobic009G029600--Sobic002G215800 Sobic009G029600--Sobic009G226300 Sobic006G271200--Sobic001G003000 Sobic006G271200--Sobic006G237900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic006G271200--Sobic001G089800 Sobic006G271200--Sobic010G043400 Sobic004G351300 Sobic004G351300 Sobic006G271200--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic006G271200--Sobic001G436900 Sobic010G072800 Sobic010G072800 Sobic006G271200--Sobic010G072800 Sobic008G044000--Sobic003G219600 Sobic008G044000--Sobic009G211400 Sobic002G155400 Sobic002G155400 Sobic008G044000--Sobic002G155400 Sobic004G246200 Sobic004G246200 Sobic008G044000--Sobic004G246200 Sobic008G044000--Sobic005G018500 Sobic008G044000--Sobic009G029600 Sobic001G512800 Sobic001G512800 Sobic008G044000--Sobic001G512800 Sobic005G152100 Sobic005G152100 Sobic008G044000--Sobic005G152100 Sobic008G044000--Sobic003G259200 Sobic001G350700--Sobic001G003000 Sobic001G350700--Sobic001G217400 Sobic006G090500 Sobic006G090500 Sobic001G350700--Sobic006G090500 Sobic001G350700--Sobic006G271200 Sobic006G214200 Sobic006G214200 Sobic001G350700--Sobic006G214200 Sobic001G305500 Sobic001G305500 Sobic001G350700--Sobic001G305500 Sobic001G440600 Sobic001G440600 Sobic001G350700--Sobic001G440600 Sobic003G228100 Sobic003G228100 Sobic001G350700--Sobic003G228100 Sobic004G341200 Sobic004G341200 Sobic001G350700--Sobic004G341200
Octagon: transcription factors


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