Gene annotation
Transcriptome id Sobic.006G102800.1
Synonym Sb06g018630
Functional annotation transporter family protein, putative, expressed
UniProt C5Y9Q7
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF44
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G34580 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g38220.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056183 , Zm00025a011155 , Zm00025a011150
Brachypodium KQJ82923 , KQJ95161 , KQJ82915 , KQK21214 , KQJ82916
Barley HORVU2Hr1G079620.1 , HORVU2Hr1G079620.2 , HORVU2Hr1G079700.3 , HORVU2Hr1G079790.12 , HORVU2Hr1G079790.10 , HORVU2Hr1G079790.11 , HORVU2Hr1G079700.4 , HORVU2Hr1G079700.2 , HORVU2Hr1G079700.1 , HORVU2Hr1G079790.1 , HORVU2Hr1G079790.2 , HORVU2Hr1G079790.3 , HORVU2Hr1G079790.4 , HORVU2Hr1G079790.5 , HORVU2Hr1G079790.6 , HORVU2Hr1G079790.7 , HORVU2Hr1G079790.8 , HORVU2Hr1G079620.3 , HORVU5Hr1G000380.1
Wheat TraesCS5B02G001000 , TraesCS5D02G234100 , TraesCS2D02G319100 , TraesCS2A02G341400 , TraesCS4B02G346400 , TraesCS2B02G339100 , TraesCS7B02G185800 , TraesCS7D02G286600 , TraesCS5D02G001600 , TraesCS5A02G515200 , TraesCS4D02G341400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G149000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.006G160700 Beta-fructofuranosidase 1 (Precursor)(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
3 Sobic.003G266400 clathrin assembly protein, putative, expressed -
4 Sobic.001G035600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@induced by either light or pathogen inoculation in the BTx623 seedlings(PubMedID : 20529887)@"The bmr30 mutant harbors a mutation in a phenylpropanoid biosynthetic gene that is key to the interconnection between flavonoids and monolignols, both of which are utilized for lignin synthesis in the grasses."(PubMedID : 34925394)@expressed protein K01859: chalcone isomerase
5 Sobic.009G240700 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
6 Sobic.009G259200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
7 Sobic.001G185400 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
8 Sobic.006G038200 receptor protein kinase, putative, expressed -
9 Sobic.002G072200 expressed protein -
10 Sobic.004G129100 lipase class 3 family protein, putative, expressed -
11 Sobic.004G203900 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
12 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
13 Sobic.002G266900 expressed protein -
14 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
15 Sobic.003G108000 expressed protein -
16 Sobic.001G146000 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
17 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
18 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.007G190200 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
20 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic006G102800 Sobic006G102800 Sobic003G149000 Sobic003G149000 Sobic006G102800--Sobic003G149000 Sobic006G160700 Sobic006G160700 Sobic006G102800--Sobic006G160700 Sobic003G266400 Sobic003G266400 Sobic006G102800--Sobic003G266400 Sobic001G035600 Sobic001G035600 Sobic006G102800--Sobic001G035600 Sobic009G240700 Sobic009G240700 Sobic006G102800--Sobic009G240700 Sobic009G259200 Sobic009G259200 Sobic006G102800--Sobic009G259200 Sobic001G185400 Sobic001G185400 Sobic006G102800--Sobic001G185400 Sobic006G038200 Sobic006G038200 Sobic006G102800--Sobic006G038200 Sobic002G072200 Sobic002G072200 Sobic006G102800--Sobic002G072200 Sobic003G149000--Sobic006G102800 Sobic006G086800 Sobic006G086800 Sobic003G149000--Sobic006G086800 Sobic007G190200 Sobic007G190200 Sobic003G149000--Sobic007G190200 Sobic008G000100 Sobic008G000100 Sobic003G149000--Sobic008G000100 Sobic009G070700 Sobic009G070700 Sobic003G149000--Sobic009G070700 Sobic004G203900 Sobic004G203900 Sobic003G149000--Sobic004G203900 Sobic004G129100 Sobic004G129100 Sobic003G149000--Sobic004G129100 Sobic003G149000--Sobic006G160700 Sobic006G237200 Sobic006G237200 Sobic003G149000--Sobic006G237200 Sobic004G260200 Sobic004G260200 Sobic006G160700--Sobic004G260200 Sobic001G282500 Sobic001G282500 Sobic006G160700--Sobic001G282500 Sobic009G215300 Sobic009G215300 Sobic006G160700--Sobic009G215300 Sobic010G031000 Sobic010G031000 Sobic006G160700--Sobic010G031000 Sobic006G160700--Sobic006G102800 Sobic004G078000 Sobic004G078000 Sobic006G160700--Sobic004G078000 Sobic001G404800 Sobic001G404800 Sobic006G160700--Sobic001G404800 Sobic004G173700 Sobic004G173700 Sobic006G160700--Sobic004G173700 Sobic010G032600 Sobic010G032600 Sobic006G160700--Sobic010G032600 Sobic003G364900 Sobic003G364900 Sobic003G266400--Sobic003G364900 Sobic010G018500 Sobic010G018500 Sobic003G266400--Sobic010G018500 Sobic002G111500 Sobic002G111500 Sobic003G266400--Sobic002G111500 Sobic001G543400 Sobic001G543400 Sobic003G266400--Sobic001G543400 Sobic002G090500 Sobic002G090500 Sobic003G266400--Sobic002G090500 Sobic002G153000 Sobic002G153000 Sobic003G266400--Sobic002G153000 Sobic002G232400 Sobic002G232400 Sobic003G266400--Sobic002G232400 Sobic010G042600 Sobic010G042600 Sobic003G266400--Sobic010G042600 Sobic001G146000 Sobic001G146000 Sobic003G266400--Sobic001G146000 Sobic001G012400 Sobic001G012400 Sobic001G035600--Sobic001G012400 Sobic002G338400 Sobic002G338400 Sobic001G035600--Sobic002G338400 Sobic004G282700 Sobic004G282700 Sobic001G035600--Sobic004G282700 Sobic001G035600--Sobic006G038200 Sobic001G012500 Sobic001G012500 Sobic001G035600--Sobic001G012500 Sobic002G347300 Sobic002G347300 Sobic001G035600--Sobic002G347300 Sobic001G035600--Sobic009G240700 Sobic003G170300 Sobic003G170300 Sobic001G035600--Sobic003G170300 Sobic003G216500 Sobic003G216500 Sobic001G035600--Sobic003G216500 Sobic009G240700--Sobic003G170300 Sobic004G155100 Sobic004G155100 Sobic009G240700--Sobic004G155100 Sobic003G238500 Sobic003G238500 Sobic009G240700--Sobic003G238500 Sobic001G473400 Sobic001G473400 Sobic009G240700--Sobic001G473400 Sobic002G395000 Sobic002G395000 Sobic009G240700--Sobic002G395000 Sobic002G078300 Sobic002G078300 Sobic009G240700--Sobic002G078300 Sobic001G286200 Sobic001G286200 Sobic009G240700--Sobic001G286200 Sobic010G264300 Sobic010G264300 Sobic009G240700--Sobic010G264300 Sobic009G240700--Sobic001G282500 Sobic001G457000 Sobic001G457000 Sobic009G259200--Sobic001G457000 Sobic009G224400 Sobic009G224400 Sobic009G259200--Sobic009G224400 Sobic003G260600 Sobic003G260600 Sobic009G259200--Sobic003G260600 Sobic007G119600 Sobic007G119600 Sobic009G259200--Sobic007G119600 Sobic003G028200 Sobic003G028200 Sobic009G259200--Sobic003G028200 Sobic002G255400 Sobic002G255400 Sobic009G259200--Sobic002G255400 Sobic003G201500 Sobic003G201500 Sobic009G259200--Sobic003G201500 Sobic009G259200--Sobic004G173700 Sobic003G089100 Sobic003G089100 Sobic009G259200--Sobic003G089100 Sobic002G410700 Sobic002G410700 Sobic001G185400--Sobic002G410700 Sobic001G185400--Sobic006G102800 Sobic004G149100 Sobic004G149100 Sobic001G185400--Sobic004G149100 Sobic001G185400--Sobic006G237200 Sobic001G185400--Sobic006G160700 Sobic004G232700 Sobic004G232700 Sobic001G185400--Sobic004G232700 Sobic001G185400--Sobic010G032600 Sobic001G185400--Sobic002G395000 Sobic001G185400--Sobic009G259200 Sobic006G038200--Sobic003G170300 Sobic006G038200--Sobic004G282700 Sobic006G038200--Sobic002G338400 Sobic006G038200--Sobic010G264300 Sobic008G178800 Sobic008G178800 Sobic006G038200--Sobic008G178800 Sobic009G017500 Sobic009G017500 Sobic006G038200--Sobic009G017500 Sobic006G038200--Sobic003G216500 Sobic006G038200--Sobic001G035600 Sobic006G075000 Sobic006G075000 Sobic006G038200--Sobic006G075000 Sobic009G032600 Sobic009G032600 Sobic002G072200--Sobic009G032600 Sobic002G072200--Sobic006G075000 Sobic003G062000 Sobic003G062000 Sobic002G072200--Sobic003G062000 Sobic009G226900 Sobic009G226900 Sobic002G072200--Sobic009G226900 Sobic009G232200 Sobic009G232200 Sobic002G072200--Sobic009G232200 Sobic006G036400 Sobic006G036400 Sobic002G072200--Sobic006G036400 Sobic010G086800 Sobic010G086800 Sobic002G072200--Sobic010G086800 Sobic001G208600 Sobic001G208600 Sobic002G072200--Sobic001G208600 Sobic003G099166 Sobic003G099166 Sobic002G072200--Sobic003G099166
Octagon: transcription factors


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