Gene annotation
Transcriptome id Sobic.006G160700.4,Sobic.006G160700.2,Sobic.006G160700.3
Synonym Sb06g023760,
Functional annotation Beta-fructofuranosidase 1 (Precursor) (PubMedID : 26186930)
"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
glycosyl hydrolases, putative, expressed
UniProt A0A1Z5RF00 , A0A1Z5RE48 , A0A1Z5RE49
Pfam PF08244 PF00251 PF00251 PF08244
Panther DB PTHR31953:SF6 PTHR31953 PTHR31953 PTHR31953:SF6
NCBI CDD KOG0228; Beta-fructofuranosidase (invertase)
KEGG Orthology K01193; INV, beta-fructofuranosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62660 : Glycosyl hydrolases family 32 protein
RAP-DB (Rice) LOC_Os04g45290.1 : glycosyl hydrolases, putative, expressed
MaizeGDB (Corn) Zm00025a010431 , Zm00025a056601
Brachypodium KQJ83796
Barley HORVU2Hr1G091910.5 , HORVU2Hr1G091910.6 , HORVU2Hr1G091910.1 , HORVU2Hr1G091990.4 , HORVU2Hr1G091990.5 , HORVU2Hr1G091990.6 , HORVU2Hr1G091990.1 , HORVU2Hr1G091990.2 , HORVU2Hr1G091990.3
Wheat TraesCS7D02G010000 , TraesCS7D02G010000 , TraesCS2A02G386100 , TraesCS2A02G386100 , TraesCS2A02G386100 , TraesCS2D02G382600 , TraesCS7D02G054800 , TraesCS7D02G054800 , TraesCS7D02G054800 , TraesCS4A02G485800 , TraesCS2D02G382600 , TraesCS7A02G009400 , TraesCS2B02G403000 , TraesCS4B02G356800 , TraesCS6A02G069000 , TraesCS4A02G484800 , TraesCS7A02G060300 , TraesCS7A02G060300 , TraesCS7A02G060300 , TraesCS7D02G009300 , TraesCS7D02G009200 , TraesCS7D02G009200 , TraesCS5A02G526200 , TraesCS7A02G009600 , TraesCS7A02G009600 , TraesCS7A02G009600 , TraesCS4A02G485600 , TraesCS7D02G008900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
2 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
3 Sobic.009G215300 fiber protein Fb11, putative, expressed -
4 Sobic.010G031000 expressed protein -
5 Sobic.006G102800 transporter family protein, putative, expressed -
6 Sobic.004G078000 citrate synthase, putative, expressed K01647: CS, citrate synthase
7 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
8 Sobic.004G173700 SLL1 protein, putative, expressed -
9 Sobic.010G032600 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
10 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
11 Sobic.001G387200 expressed protein -
12 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
13 Sobic.009G240700 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
14 Sobic.001G465800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
15 Sobic.010G216400 expressed protein -
16 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
17 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
18 Sobic.009G259200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
19 Sobic.002G260200 - -
20 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b


Gene co-expression network
sample Sobic006G160700 Sobic006G160700 Sobic004G260200 Sobic004G260200 Sobic006G160700--Sobic004G260200 Sobic001G282500 Sobic001G282500 Sobic006G160700--Sobic001G282500 Sobic009G215300 Sobic009G215300 Sobic006G160700--Sobic009G215300 Sobic010G031000 Sobic010G031000 Sobic006G160700--Sobic010G031000 Sobic006G102800 Sobic006G102800 Sobic006G160700--Sobic006G102800 Sobic004G078000 Sobic004G078000 Sobic006G160700--Sobic004G078000 Sobic001G404800 Sobic001G404800 Sobic006G160700--Sobic001G404800 Sobic004G173700 Sobic004G173700 Sobic006G160700--Sobic004G173700 Sobic010G032600 Sobic010G032600 Sobic006G160700--Sobic010G032600 Sobic002G309700 Sobic002G309700 Sobic004G260200--Sobic002G309700 Sobic001G047800 Sobic001G047800 Sobic004G260200--Sobic001G047800 Sobic001G465800 Sobic001G465800 Sobic004G260200--Sobic001G465800 Sobic002G395000 Sobic002G395000 Sobic004G260200--Sobic002G395000 Sobic002G356400 Sobic002G356400 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic004G260200--Sobic009G215300 Sobic002G263100 Sobic002G263100 Sobic004G260200--Sobic002G263100 Sobic001G074700 Sobic001G074700 Sobic004G260200--Sobic001G074700 Sobic001G282500--Sobic002G309700 Sobic001G282500--Sobic009G215300 Sobic001G282500--Sobic004G260200 Sobic001G282500--Sobic002G356400 Sobic001G282500--Sobic002G395000 Sobic002G308300 Sobic002G308300 Sobic001G282500--Sobic002G308300 Sobic001G181500 Sobic001G181500 Sobic001G282500--Sobic001G181500 Sobic003G135600 Sobic003G135600 Sobic001G282500--Sobic003G135600 Sobic001G350600 Sobic001G350600 Sobic001G282500--Sobic001G350600 Sobic009G215300--Sobic002G309700 Sobic009G215300--Sobic001G181500 Sobic009G215300--Sobic001G047800 Sobic009G215300--Sobic004G260200 Sobic009G211900 Sobic009G211900 Sobic009G215300--Sobic009G211900 Sobic007G013900 Sobic007G013900 Sobic009G215300--Sobic007G013900 Sobic009G215300--Sobic001G282500 Sobic009G215300--Sobic003G135600 Sobic009G215300--Sobic001G404800 Sobic009G069600 Sobic009G069600 Sobic010G031000--Sobic009G069600 Sobic003G273000 Sobic003G273000 Sobic010G031000--Sobic003G273000 Sobic010G031000--Sobic004G260200 Sobic001G197000 Sobic001G197000 Sobic010G031000--Sobic001G197000 Sobic010G031000--Sobic001G404800 Sobic010G031000--Sobic001G047800 Sobic001G508466 Sobic001G508466 Sobic010G031000--Sobic001G508466 Sobic003G215700 Sobic003G215700 Sobic010G031000--Sobic003G215700 Sobic010G216400 Sobic010G216400 Sobic010G031000--Sobic010G216400 Sobic003G149000 Sobic003G149000 Sobic006G102800--Sobic003G149000 Sobic006G102800--Sobic006G160700 Sobic003G266400 Sobic003G266400 Sobic006G102800--Sobic003G266400 Sobic001G035600 Sobic001G035600 Sobic006G102800--Sobic001G035600 Sobic009G240700 Sobic009G240700 Sobic006G102800--Sobic009G240700 Sobic009G259200 Sobic009G259200 Sobic006G102800--Sobic009G259200 Sobic001G185400 Sobic001G185400 Sobic006G102800--Sobic001G185400 Sobic006G038200 Sobic006G038200 Sobic006G102800--Sobic006G038200 Sobic002G072200 Sobic002G072200 Sobic006G102800--Sobic002G072200 Sobic004G078000--Sobic002G356400 Sobic004G078000--Sobic001G350600 Sobic010G023800 Sobic010G023800 Sobic004G078000--Sobic010G023800 Sobic003G209000 Sobic003G209000 Sobic004G078000--Sobic003G209000 Sobic001G342200 Sobic001G342200 Sobic004G078000--Sobic001G342200 Sobic004G170400 Sobic004G170400 Sobic004G078000--Sobic004G170400 Sobic001G040100 Sobic001G040100 Sobic004G078000--Sobic001G040100 Sobic009G054000 Sobic009G054000 Sobic004G078000--Sobic009G054000 Sobic009G242400 Sobic009G242400 Sobic004G078000--Sobic009G242400 Sobic001G404800--Sobic003G209000 Sobic004G259200 Sobic004G259200 Sobic001G404800--Sobic004G259200 Sobic001G404800--Sobic001G047800 Sobic001G404800--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic001G404800--Sobic002G418400 Sobic001G404800--Sobic002G356400 Sobic001G404800--Sobic002G309700 Sobic006G083500 Sobic006G083500 Sobic001G404800--Sobic006G083500 Sobic001G404800--Sobic004G260200 Sobic003G137600 Sobic003G137600 Sobic004G173700--Sobic003G137600 Sobic006G120900 Sobic006G120900 Sobic004G173700--Sobic006G120900 Sobic002G420600 Sobic002G420600 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic001G365700 Sobic001G365700 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic007G212100 Sobic007G212100 Sobic004G173700--Sobic007G212100 Sobic001G303900 Sobic001G303900 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300 Sobic007G023400 Sobic007G023400 Sobic010G032600--Sobic007G023400 Sobic010G032600--Sobic002G395000 Sobic007G171500 Sobic007G171500 Sobic010G032600--Sobic007G171500 Sobic004G297700 Sobic004G297700 Sobic010G032600--Sobic004G297700 Sobic001G457000 Sobic001G457000 Sobic010G032600--Sobic001G457000 Sobic002G262200 Sobic002G262200 Sobic010G032600--Sobic002G262200 Sobic001G073600 Sobic001G073600 Sobic010G032600--Sobic001G073600 Sobic009G191400 Sobic009G191400 Sobic010G032600--Sobic009G191400 Sobic009G224400 Sobic009G224400 Sobic010G032600--Sobic009G224400
Octagon: transcription factors


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