Gene annotation
Transcriptome id Sobic.002G266900.2,Sobic.002G266900.3,Sobic.002G266900.1
Synonym Sb02g030105
Functional annotation expressed protein
UniProt A0A1B6QDN4 , A0A1W0W640 , A0A1W0W612
Pfam PF13578
Panther DB PTHR37909 PTHR37909:SF1 PTHR37909:SF1 PTHR37909
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01180 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os09g34320.1 : expressed protein
MaizeGDB (Corn) Zm00025a014367
Brachypodium KQJ91081
Barley HORVU5Hr1G079850.1 , HORVU5Hr1G079850.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G050800 expressed protein -
2 Sobic.001G254300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized oxidoreductase, putative, expressed -
3 Sobic.001G162400 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
4 Sobic.003G348100 white-brown complex homolog protein, putative, expressed -
5 Sobic.006G102800 transporter family protein, putative, expressed -
6 Sobic.001G529200 no apical meristem protein, putative, expressed -
7 Sobic.008G190800 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
8 Sobic.002G013800 NB-ARC domain containing protein, expressed -
9 Sobic.003G326700 glycosyl hydrolases family 17, putative, expressed -
10 Sobic.006G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.004G116400 OsFBK5 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.002G135000 expressed protein -
13 Sobic.008G130800 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
14 Sobic.002G226800 protein phosphotase protein, putative, expressed -
15 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
16 Sobic.007G190200 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
17 Sobic.004G050400 expressed protein -
18 Sobic.008G030600 similar to Non-specific lipid-transfer protein(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Protease inhibitor/seed storage/LTP("PubMedID : 26759170,PubMedID : 24597475")@LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.006G145600 Os4bglu16 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
20 Sobic.002G096300 kinase, pfkB family, putative, expressed -


Gene co-expression network
sample Sobic002G266900 Sobic002G266900 Sobic005G050800 Sobic005G050800 Sobic002G266900--Sobic005G050800 Sobic001G254300 Sobic001G254300 Sobic002G266900--Sobic001G254300 Sobic001G162400 Sobic001G162400 Sobic002G266900--Sobic001G162400 Sobic003G348100 Sobic003G348100 Sobic002G266900--Sobic003G348100 Sobic006G102800 Sobic006G102800 Sobic002G266900--Sobic006G102800 Sobic001G529200 Sobic001G529200 Sobic002G266900--Sobic001G529200 Sobic008G190800 Sobic008G190800 Sobic002G266900--Sobic008G190800 Sobic002G013800 Sobic002G013800 Sobic002G266900--Sobic002G013800 Sobic003G326700 Sobic003G326700 Sobic002G266900--Sobic003G326700 Sobic005G050800--Sobic003G348100 Sobic003G435300 Sobic003G435300 Sobic005G050800--Sobic003G435300 Sobic001G400000 Sobic001G400000 Sobic005G050800--Sobic001G400000 Sobic005G050800--Sobic001G529200 Sobic004G116400 Sobic004G116400 Sobic005G050800--Sobic004G116400 Sobic008G120920 Sobic008G120920 Sobic005G050800--Sobic008G120920 Sobic010G189432 Sobic010G189432 Sobic005G050800--Sobic010G189432 Sobic004G253200 Sobic004G253200 Sobic005G050800--Sobic004G253200 Sobic002G186200 Sobic002G186200 Sobic005G050800--Sobic002G186200 Sobic001G254300--Sobic002G186200 Sobic010G253200 Sobic010G253200 Sobic001G254300--Sobic010G253200 Sobic004G241300 Sobic004G241300 Sobic001G254300--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic001G254300--Sobic003G423700 Sobic001G435700 Sobic001G435700 Sobic001G254300--Sobic001G435700 Sobic001G254300--Sobic001G529200 Sobic010G181701 Sobic010G181701 Sobic001G254300--Sobic010G181701 Sobic010G123100 Sobic010G123100 Sobic001G254300--Sobic010G123100 Sobic006G219801 Sobic006G219801 Sobic001G254300--Sobic006G219801 Sobic001G502100 Sobic001G502100 Sobic001G162400--Sobic001G502100 Sobic009G176600 Sobic009G176600 Sobic001G162400--Sobic009G176600 Sobic010G094400 Sobic010G094400 Sobic001G162400--Sobic010G094400 Sobic002G123400 Sobic002G123400 Sobic001G162400--Sobic002G123400 Sobic003G354850 Sobic003G354850 Sobic001G162400--Sobic003G354850 Sobic005G212300 Sobic005G212300 Sobic001G162400--Sobic005G212300 Sobic002G100300 Sobic002G100300 Sobic001G162400--Sobic002G100300 Sobic003G090200 Sobic003G090200 Sobic001G162400--Sobic003G090200 Sobic003G340000 Sobic003G340000 Sobic001G162400--Sobic003G340000 Sobic003G348100--Sobic001G400000 Sobic003G348100--Sobic004G253200 Sobic008G055600 Sobic008G055600 Sobic003G348100--Sobic008G055600 Sobic003G348100--Sobic008G120920 Sobic001G112600 Sobic001G112600 Sobic003G348100--Sobic001G112600 Sobic003G244400 Sobic003G244400 Sobic003G348100--Sobic003G244400 Sobic003G441000 Sobic003G441000 Sobic003G348100--Sobic003G441000 Sobic003G348100--Sobic010G189432 Sobic004G046800 Sobic004G046800 Sobic003G348100--Sobic004G046800 Sobic003G149000 Sobic003G149000 Sobic006G102800--Sobic003G149000 Sobic006G160700 Sobic006G160700 Sobic006G102800--Sobic006G160700 Sobic003G266400 Sobic003G266400 Sobic006G102800--Sobic003G266400 Sobic001G035600 Sobic001G035600 Sobic006G102800--Sobic001G035600 Sobic009G240700 Sobic009G240700 Sobic006G102800--Sobic009G240700 Sobic009G259200 Sobic009G259200 Sobic006G102800--Sobic009G259200 Sobic001G185400 Sobic001G185400 Sobic006G102800--Sobic001G185400 Sobic006G038200 Sobic006G038200 Sobic006G102800--Sobic006G038200 Sobic002G072200 Sobic002G072200 Sobic006G102800--Sobic002G072200 Sobic001G529200--Sobic010G253200 Sobic001G529200--Sobic002G186200 Sobic002G420100 Sobic002G420100 Sobic001G529200--Sobic002G420100 Sobic001G529200--Sobic004G241300 Sobic004G261800 Sobic004G261800 Sobic001G529200--Sobic004G261800 Sobic001G529200--Sobic003G348100 Sobic001G529200--Sobic003G423700 Sobic008G011800 Sobic008G011800 Sobic001G529200--Sobic008G011800 Sobic003G159700 Sobic003G159700 Sobic001G529200--Sobic003G159700 Sobic005G151000 Sobic005G151000 Sobic008G190800--Sobic005G151000 Sobic009G096566 Sobic009G096566 Sobic008G190800--Sobic009G096566 Sobic002G105501 Sobic002G105501 Sobic008G190800--Sobic002G105501 Sobic007G220066 Sobic007G220066 Sobic008G190800--Sobic007G220066 Sobic007G143900 Sobic007G143900 Sobic008G190800--Sobic007G143900 Sobic006G084701 Sobic006G084701 Sobic008G190800--Sobic006G084701 Sobic004G349500 Sobic004G349500 Sobic008G190800--Sobic004G349500 Sobic004G351932 Sobic004G351932 Sobic008G190800--Sobic004G351932 Sobic006G115400 Sobic006G115400 Sobic008G190800--Sobic006G115400 Sobic005G127900 Sobic005G127900 Sobic002G013800--Sobic005G127900 Sobic005G110547 Sobic005G110547 Sobic002G013800--Sobic005G110547 Sobic010G165700 Sobic010G165700 Sobic002G013800--Sobic010G165700 Sobic004G213400 Sobic004G213400 Sobic002G013800--Sobic004G213400 Sobic008G126500 Sobic008G126500 Sobic002G013800--Sobic008G126500 Sobic010G143000 Sobic010G143000 Sobic002G013800--Sobic010G143000 Sobic002G101100 Sobic002G101100 Sobic002G013800--Sobic002G101100 Sobic005G098900 Sobic005G098900 Sobic002G013800--Sobic005G098900 Sobic001G318100 Sobic001G318100 Sobic002G013800--Sobic001G318100 Sobic006G145600 Sobic006G145600 Sobic003G326700--Sobic006G145600 Sobic001G221200 Sobic001G221200 Sobic003G326700--Sobic001G221200 Sobic001G285600 Sobic001G285600 Sobic003G326700--Sobic001G285600 Sobic002G226800 Sobic002G226800 Sobic003G326700--Sobic002G226800 Sobic004G081900 Sobic004G081900 Sobic003G326700--Sobic004G081900 Sobic002G431700 Sobic002G431700 Sobic003G326700--Sobic002G431700 Sobic008G030600 Sobic008G030600 Sobic003G326700--Sobic008G030600 Sobic006G086800 Sobic006G086800 Sobic003G326700--Sobic006G086800 Sobic008G130800 Sobic008G130800 Sobic003G326700--Sobic008G130800
Octagon: transcription factors


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