Gene annotation
Transcriptome id Sobic.006G136600.1
Synonym Sb06g021620
Functional annotation expressed protein
UniProt A0A1Z5RE75
Pfam PF00687
Panther DB PTHR23105 PTHR23105:SF31
NCBI CDD -
KEGG Orthology K14775; UTP30, ribosome biogenesis protein UTP30
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06380 : Ribosomal protein L1p/L10e family
RAP-DB (Rice) LOC_Os04g42200.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G086320.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G092700 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.005G102100 chalcone synthase, putative, expressed -
3 Sobic.003G229150 - -
4 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
5 Sobic.006G197000 heavy-metal-associated domain-containing protein, putative, expressed -
6 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.008G028500 expressed protein -
8 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
9 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
10 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
11 Sobic.001G200500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
12 Sobic.002G156300 - -
13 Sobic.002G425900 expressed protein -
14 Sobic.001G089200 - -
15 Sobic.010G224800 patellin-5, putative, expressed -
16 Sobic.004G329100 gibberellin 2-beta-dioxygenase 7, putative, expressed -
17 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
18 Sobic.002G056300 AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
19 Sobic.003G105300 - -
20 Sobic.001G493800 expressed protein -


Gene co-expression network
sample Sobic006G136600 Sobic006G136600 Sobic002G092700 Sobic002G092700 Sobic006G136600--Sobic002G092700 Sobic005G102100 Sobic005G102100 Sobic006G136600--Sobic005G102100 Sobic003G229150 Sobic003G229150 Sobic006G136600--Sobic003G229150 Sobic004G128600 Sobic004G128600 Sobic006G136600--Sobic004G128600 Sobic006G197000 Sobic006G197000 Sobic006G136600--Sobic006G197000 Sobic008G133100 Sobic008G133100 Sobic006G136600--Sobic008G133100 Sobic008G028500 Sobic008G028500 Sobic006G136600--Sobic008G028500 Sobic003G350100 Sobic003G350100 Sobic006G136600--Sobic003G350100 Sobic001G193400 Sobic001G193400 Sobic006G136600--Sobic001G193400 Sobic004G251350 Sobic004G251350 Sobic002G092700--Sobic004G251350 Sobic002G092700--Sobic008G133100 Sobic001G493800 Sobic001G493800 Sobic002G092700--Sobic001G493800 Sobic009G163500 Sobic009G163500 Sobic002G092700--Sobic009G163500 Sobic010G179150 Sobic010G179150 Sobic002G092700--Sobic010G179150 Sobic007G111600 Sobic007G111600 Sobic002G092700--Sobic007G111600 Sobic010G224800 Sobic010G224800 Sobic002G092700--Sobic010G224800 Sobic004G197300 Sobic004G197300 Sobic002G092700--Sobic004G197300 Sobic001G255700 Sobic001G255700 Sobic002G092700--Sobic001G255700 Sobic005G102100--Sobic008G133100 Sobic004G330400 Sobic004G330400 Sobic005G102100--Sobic004G330400 Sobic002G284800 Sobic002G284800 Sobic005G102100--Sobic002G284800 Sobic002G425900 Sobic002G425900 Sobic005G102100--Sobic002G425900 Sobic005G102100--Sobic001G255700 Sobic001G200500 Sobic001G200500 Sobic005G102100--Sobic001G200500 Sobic005G102100--Sobic010G224800 Sobic003G368150 Sobic003G368150 Sobic005G102100--Sobic003G368150 Sobic007G001300 Sobic007G001300 Sobic005G102100--Sobic007G001300 Sobic008G139900 Sobic008G139900 Sobic003G229150--Sobic008G139900 Sobic003G229150--Sobic001G493800 Sobic003G229150--Sobic004G330400 Sobic003G229150--Sobic005G102100 Sobic006G162700 Sobic006G162700 Sobic003G229150--Sobic006G162700 Sobic003G229150--Sobic006G136600 Sobic003G099500 Sobic003G099500 Sobic003G229150--Sobic003G099500 Sobic003G229150--Sobic008G028500 Sobic003G396900 Sobic003G396900 Sobic003G229150--Sobic003G396900 Sobic004G128600--Sobic006G197000 Sobic004G128600--Sobic002G425900 Sobic004G128600--Sobic010G224800 Sobic010G114400 Sobic010G114400 Sobic004G128600--Sobic010G114400 Sobic009G154000 Sobic009G154000 Sobic004G128600--Sobic009G154000 Sobic004G128600--Sobic007G001300 Sobic003G201400 Sobic003G201400 Sobic004G128600--Sobic003G201400 Sobic004G128600--Sobic001G200500 Sobic004G128600--Sobic005G102100 Sobic006G197000--Sobic004G128600 Sobic006G197000--Sobic003G201400 Sobic006G197000--Sobic010G224800 Sobic006G197000--Sobic010G114400 Sobic006G197000--Sobic007G001300 Sobic002G156300 Sobic002G156300 Sobic006G197000--Sobic002G156300 Sobic009G031100 Sobic009G031100 Sobic006G197000--Sobic009G031100 Sobic003G109400 Sobic003G109400 Sobic006G197000--Sobic003G109400 Sobic006G197000--Sobic001G200500 Sobic008G133100--Sobic002G284800 Sobic008G133100--Sobic001G255700 Sobic008G133100--Sobic003G368150 Sobic001G441800 Sobic001G441800 Sobic008G133100--Sobic001G441800 Sobic004G239000 Sobic004G239000 Sobic008G133100--Sobic004G239000 Sobic008G131800 Sobic008G131800 Sobic008G133100--Sobic008G131800 Sobic003G105300 Sobic003G105300 Sobic008G133100--Sobic003G105300 Sobic008G133100--Sobic004G197300 Sobic008G133100--Sobic001G200500 Sobic008G028500--Sobic002G425900 SobicK044200 SobicK044200 Sobic008G028500--SobicK044200 Sobic008G028500--Sobic010G224800 Sobic008G028500--Sobic004G330400 Sobic008G028500--Sobic009G031100 Sobic008G028500--Sobic002G284800 Sobic008G028500--Sobic003G109400 Sobic008G028500--Sobic003G368150 Sobic008G028500--Sobic001G255700 Sobic003G067300 Sobic003G067300 Sobic003G350100--Sobic003G067300 Sobic004G265400 Sobic004G265400 Sobic003G350100--Sobic004G265400 Sobic007G149600 Sobic007G149600 Sobic003G350100--Sobic007G149600 Sobic003G350100--Sobic001G193400 Sobic003G067500 Sobic003G067500 Sobic003G350100--Sobic003G067500 Sobic003G200501 Sobic003G200501 Sobic003G350100--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic003G350100--Sobic002G210200 Sobic002G387100 Sobic002G387100 Sobic003G350100--Sobic002G387100 Sobic003G350100--Sobic008G133100 Sobic001G193400--Sobic003G350100 Sobic001G193400--Sobic003G067300 Sobic001G193400--Sobic004G265400 Sobic001G193400--Sobic007G149600 Sobic001G193400--Sobic003G200501 Sobic001G193400--Sobic003G067500 Sobic001G193400--Sobic002G210200 Sobic001G193400--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G193400--Sobic002G430200
Octagon: transcription factors


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