Gene annotation
Transcriptome id Sobic.006G165800.1
Synonym SUVH5, SGD9, Sb06g024160
Functional annotation histone-lysine N-methyltransferase, putative, expressed
UniProt C5YD31
Pfam PF05033 PF00856 PF02182
Panther DB PTHR22884 PTHR22884:SF300
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G35160 : SU(VAR)3-9 homolog 5
RAP-DB (Rice) LOC_Os04g45990.1 : histone-lysine N-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a010369
Brachypodium PNT61595 , PNT61594 , PNT61596 , PNT61591 , PNT61590 , PNT61593 , PNT61592 , KQJ83880
Barley HORVU2Hr1G093050.3 , HORVU2Hr1G093050.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G147100 esterase/lipase/thioesterase, putative, expressed -
2 Sobic.009G102000 OsFBX9 - F-box domain containing protein, expressed -
3 Sobic.002G317400 expressed protein -
4 Sobic.004G042900 VIL2 protein, putative, expressed -
5 Sobic.007G147400 - -
6 Sobic.009G228400 lipase-related, putative, expressed -
7 Sobic.K028600 expressed protein -
8 Sobic.002G278000 endonuclease/exonuclease/phosphatase family protein, putative, expressed K10772: AP endonuclease 2
9 Sobic.003G299500 expressed protein -
10 Sobic.002G292800 MORN repeat domain containing protein, expressed -
11 Sobic.002G263300 - -
12 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
13 Sobic.003G420400 - -
14 Sobic.006G170900 growth regulator related protein, putative, expressed -
15 Sobic.001G321900 CGMC_GSK.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed -
16 Sobic.002G063900 zinc ion binding protein, putative, expressed -
17 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
18 Sobic.001G542300 expressed protein -
19 Sobic.003G194800 EF hand family protein, putative, expressed -
20 Sobic.009G090500 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase


Gene co-expression network
sample Sobic006G165800 Sobic006G165800 Sobic002G147100 Sobic002G147100 Sobic006G165800--Sobic002G147100 Sobic009G102000 Sobic009G102000 Sobic006G165800--Sobic009G102000 Sobic002G317400 Sobic002G317400 Sobic006G165800--Sobic002G317400 Sobic004G042900 Sobic004G042900 Sobic006G165800--Sobic004G042900 Sobic007G147400 Sobic007G147400 Sobic006G165800--Sobic007G147400 Sobic009G228400 Sobic009G228400 Sobic006G165800--Sobic009G228400 SobicK028600 SobicK028600 Sobic006G165800--SobicK028600 Sobic002G278000 Sobic002G278000 Sobic006G165800--Sobic002G278000 Sobic003G299500 Sobic003G299500 Sobic006G165800--Sobic003G299500 Sobic002G147200 Sobic002G147200 Sobic002G147100--Sobic002G147200 Sobic002G147100--Sobic007G147400 Sobic007G030100 Sobic007G030100 Sobic002G147100--Sobic007G030100 Sobic002G147100--Sobic009G228400 Sobic002G147100--Sobic004G042900 Sobic002G147100--Sobic009G102000 Sobic002G147100--Sobic006G165800 Sobic003G398400 Sobic003G398400 Sobic002G147100--Sobic003G398400 Sobic002G147100--Sobic002G317400 Sobic008G149800 Sobic008G149800 Sobic009G102000--Sobic008G149800 Sobic009G102000--Sobic002G317400 Sobic009G040800 Sobic009G040800 Sobic009G102000--Sobic009G040800 Sobic004G122900 Sobic004G122900 Sobic009G102000--Sobic004G122900 Sobic009G102000--Sobic002G147100 Sobic002G063900 Sobic002G063900 Sobic009G102000--Sobic002G063900 Sobic009G129600 Sobic009G129600 Sobic009G102000--Sobic009G129600 Sobic009G102000--Sobic007G147400 Sobic009G102000--Sobic003G299500 Sobic002G317400--Sobic007G147400 Sobic002G317400--Sobic008G149800 Sobic002G317400--SobicK028600 Sobic002G103600 Sobic002G103600 Sobic002G317400--Sobic002G103600 Sobic002G317400--Sobic009G102000 Sobic003G444800 Sobic003G444800 Sobic002G317400--Sobic003G444800 Sobic002G317400--Sobic002G063900 Sobic002G317400--Sobic002G278000 Sobic003G039900 Sobic003G039900 Sobic002G317400--Sobic003G039900 Sobic004G042900--Sobic002G147100 Sobic001G017200 Sobic001G017200 Sobic004G042900--Sobic001G017200 Sobic005G009100 Sobic005G009100 Sobic004G042900--Sobic005G009100 Sobic004G353400 Sobic004G353400 Sobic004G042900--Sobic004G353400 Sobic004G042900--Sobic007G030100 Sobic003G190200 Sobic003G190200 Sobic004G042900--Sobic003G190200 Sobic006G144000 Sobic006G144000 Sobic004G042900--Sobic006G144000 Sobic004G042900--Sobic002G147200 Sobic004G218300 Sobic004G218300 Sobic004G042900--Sobic004G218300 Sobic007G147400--SobicK028600 Sobic007G147400--Sobic002G063900 Sobic007G147400--Sobic002G317400 Sobic007G147400--Sobic003G444800 Sobic001G376200 Sobic001G376200 Sobic007G147400--Sobic001G376200 Sobic007G147400--Sobic002G147100 Sobic007G147400--Sobic002G103600 Sobic007G147400--Sobic003G039900 Sobic002G357700 Sobic002G357700 Sobic007G147400--Sobic002G357700 Sobic005G030700 Sobic005G030700 Sobic009G228400--Sobic005G030700 Sobic009G228400--Sobic004G218300 Sobic009G228400--Sobic002G147100 Sobic004G111600 Sobic004G111600 Sobic009G228400--Sobic004G111600 Sobic010G035801 Sobic010G035801 Sobic009G228400--Sobic010G035801 Sobic009G228400--Sobic007G147400 Sobic007G192400 Sobic007G192400 Sobic009G228400--Sobic007G192400 Sobic006G130200 Sobic006G130200 Sobic009G228400--Sobic006G130200 Sobic002G203600 Sobic002G203600 Sobic009G228400--Sobic002G203600 SobicK028600--Sobic003G444800 Sobic004G357100 Sobic004G357100 SobicK028600--Sobic004G357100 Sobic001G308400 Sobic001G308400 SobicK028600--Sobic001G308400 SobicK028600--Sobic002G103600 Sobic007G042400 Sobic007G042400 SobicK028600--Sobic007G042400 Sobic006G116100 Sobic006G116100 SobicK028600--Sobic006G116100 Sobic003G043000 Sobic003G043000 SobicK028600--Sobic003G043000 Sobic006G234700 Sobic006G234700 SobicK028600--Sobic006G234700 SobicK028600--Sobic002G063900 Sobic002G278000--Sobic002G063900 Sobic002G278000--Sobic006G116100 Sobic005G013200 Sobic005G013200 Sobic002G278000--Sobic005G013200 Sobic001G511500 Sobic001G511500 Sobic002G278000--Sobic001G511500 Sobic002G278000--Sobic008G149800 Sobic005G015900 Sobic005G015900 Sobic002G278000--Sobic005G015900 Sobic008G028700 Sobic008G028700 Sobic002G278000--Sobic008G028700 Sobic008G173100 Sobic008G173100 Sobic002G278000--Sobic008G173100 Sobic001G167200 Sobic001G167200 Sobic002G278000--Sobic001G167200 Sobic007G034200 Sobic007G034200 Sobic003G299500--Sobic007G034200 Sobic003G194800 Sobic003G194800 Sobic003G299500--Sobic003G194800 Sobic004G106250 Sobic004G106250 Sobic003G299500--Sobic004G106250 Sobic009G120400 Sobic009G120400 Sobic003G299500--Sobic009G120400 Sobic003G016500 Sobic003G016500 Sobic003G299500--Sobic003G016500 Sobic001G123600 Sobic001G123600 Sobic003G299500--Sobic001G123600 Sobic006G245900 Sobic006G245900 Sobic003G299500--Sobic006G245900 Sobic002G235900 Sobic002G235900 Sobic003G299500--Sobic002G235900 Sobic006G191200 Sobic006G191200 Sobic003G299500--Sobic006G191200
Octagon: transcription factors


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