Gene annotation
Transcriptome id Sobic.006G198500.1
Synonym Sb06g027060
Functional annotation SNARE associated Golgi protein, putative, expressed
UniProt C5YF12
Pfam PF09335
Panther DB PTHR12677 PTHR12677:SF29
NCBI CDD KOG3140; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17790 : SNARE associated Golgi protein family
RAP-DB (Rice) LOC_Os04g50216.1 : SNARE associated Golgi protein, putative, expressed
MaizeGDB (Corn) Zm00025a009990 , Zm00025a056893
Brachypodium KQJ84311
Barley HORVU2Hr1G049420.28 , HORVU2Hr1G049420.29 , HORVU7Hr1G044670.8 , HORVU7Hr1G044670.9 , HORVU2Hr1G049420.24 , HORVU2Hr1G049420.25 , HORVU2Hr1G049420.26 , HORVU2Hr1G049420.27 , HORVU2Hr1G049420.20 , HORVU2Hr1G049420.21 , HORVU2Hr1G049420.22 , HORVU2Hr1G049420.23 , HORVU2Hr1G049420.11 , HORVU2Hr1G049420.10 , HORVU2Hr1G049420.13 , HORVU2Hr1G049420.12 , HORVU2Hr1G049420.15 , HORVU2Hr1G049420.14 , HORVU2Hr1G049420.17 , HORVU2Hr1G049420.16 , HORVU2Hr1G049420.19 , HORVU2Hr1G049420.18 , HORVU7Hr1G044670.17 , HORVU2Hr1G049420.7 , HORVU7Hr1G044670.14 , HORVU2Hr1G049420.4 , HORVU7Hr1G044670.16 , HORVU2Hr1G049420.6 , HORVU2Hr1G049420.1 , HORVU7Hr1G044670.11 , HORVU2Hr1G049420.3 , HORVU2Hr1G049420.2 , HORVU7Hr1G044670.10 , HORVU2Hr1G049420.9 , HORVU2Hr1G049420.8 , HORVU7Hr1G044670.5 , HORVU7Hr1G044670.12 , HORVU7Hr1G044670.2 , HORVU7Hr1G044670.6 , HORVU7Hr1G044670.13 , HORVU7Hr1G044670.3 , HORVU7Hr1G044670.1 , HORVU7Hr1G044670.7 , HORVU7Hr1G044670.18 , HORVU7Hr1G044670.20 , HORVU7Hr1G044670.23 , HORVU7Hr1G044670.22 , HORVU7Hr1G051100.2 , HORVU2Hr1G049420.5
Wheat TraesCS2D02G446700 , TraesCS2B02G468200 , TraesCS2B02G468200 , TraesCS2B02G468200 , TraesCS2B02G468200 , TraesCS2A02G447800
Populus -


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cDNA sequences
Sobic.006G198500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G327100 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
2 Sobic.009G203100 expressed protein -
3 Sobic.001G459200 MYB family transcription factor, putative, expressed -
4 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
5 Sobic.003G429700 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.002G194100 annexin, putative, expressed K17095: annexin A7/11
7 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
8 Sobic.002G390300 heat shock protein DnaJ, putative, expressed -
9 Sobic.001G447900 OsFBO13 - F-box and other domain containing protein, expressed K10293: F-box protein 7
10 Sobic.004G339300 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
11 Sobic.004G332900 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
12 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -
13 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
14 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
15 Sobic.009G178100 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
16 Sobic.006G262900 expressed protein -
17 Sobic.001G543300 dehydrogenase, putative, expressed -
18 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
19 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
20 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1


Gene co-expression network
sample Sobic006G198500 Sobic006G198500 Sobic003G327100 Sobic003G327100 Sobic006G198500--Sobic003G327100 Sobic009G203100 Sobic009G203100 Sobic006G198500--Sobic009G203100 Sobic001G459200 Sobic001G459200 Sobic006G198500--Sobic001G459200 Sobic009G185800 Sobic009G185800 Sobic006G198500--Sobic009G185800 Sobic003G429700 Sobic003G429700 Sobic006G198500--Sobic003G429700 Sobic002G194100 Sobic002G194100 Sobic006G198500--Sobic002G194100 Sobic002G291200 Sobic002G291200 Sobic006G198500--Sobic002G291200 Sobic002G390300 Sobic002G390300 Sobic006G198500--Sobic002G390300 Sobic001G447900 Sobic001G447900 Sobic006G198500--Sobic001G447900 Sobic006G262900 Sobic006G262900 Sobic003G327100--Sobic006G262900 Sobic001G138300 Sobic001G138300 Sobic003G327100--Sobic001G138300 Sobic009G101400 Sobic009G101400 Sobic003G327100--Sobic009G101400 Sobic003G048500 Sobic003G048500 Sobic003G327100--Sobic003G048500 Sobic001G530500 Sobic001G530500 Sobic003G327100--Sobic001G530500 Sobic010G092300 Sobic010G092300 Sobic003G327100--Sobic010G092300 Sobic003G327100--Sobic006G198500 Sobic001G208300 Sobic001G208300 Sobic003G327100--Sobic001G208300 Sobic001G294200 Sobic001G294200 Sobic003G327100--Sobic001G294200 Sobic009G203100--Sobic001G459200 Sobic002G204100 Sobic002G204100 Sobic009G203100--Sobic002G204100 Sobic009G203100--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic009G203100--Sobic003G253000 Sobic004G055200 Sobic004G055200 Sobic009G203100--Sobic004G055200 Sobic001G040800 Sobic001G040800 Sobic009G203100--Sobic001G040800 Sobic004G330700 Sobic004G330700 Sobic009G203100--Sobic004G330700 Sobic005G034400 Sobic005G034400 Sobic009G203100--Sobic005G034400 Sobic002G045300 Sobic002G045300 Sobic009G203100--Sobic002G045300 Sobic001G459200--Sobic009G185800 Sobic001G459200--Sobic003G253000 Sobic001G499300 Sobic001G499300 Sobic001G459200--Sobic001G499300 Sobic001G459200--Sobic004G055200 Sobic002G267500 Sobic002G267500 Sobic001G459200--Sobic002G267500 Sobic002G046100 Sobic002G046100 Sobic001G459200--Sobic002G046100 Sobic004G272800 Sobic004G272800 Sobic001G459200--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic001G459200--Sobic003G181500 Sobic003G130800 Sobic003G130800 Sobic001G459200--Sobic003G130800 Sobic009G185800--Sobic001G459200 Sobic004G049900 Sobic004G049900 Sobic009G185800--Sobic004G049900 Sobic009G185800--Sobic003G253000 Sobic009G185800--Sobic003G130800 Sobic006G108400 Sobic006G108400 Sobic009G185800--Sobic006G108400 Sobic003G350300 Sobic003G350300 Sobic009G185800--Sobic003G350300 Sobic009G185800--Sobic004G330700 Sobic009G185800--Sobic004G272800 Sobic009G185800--Sobic003G181500 Sobic004G248800 Sobic004G248800 Sobic003G429700--Sobic004G248800 Sobic003G403400 Sobic003G403400 Sobic003G429700--Sobic003G403400 Sobic004G316900 Sobic004G316900 Sobic003G429700--Sobic004G316900 Sobic001G094500 Sobic001G094500 Sobic003G429700--Sobic001G094500 Sobic004G265700 Sobic004G265700 Sobic003G429700--Sobic004G265700 Sobic007G038800 Sobic007G038800 Sobic003G429700--Sobic007G038800 Sobic006G207500 Sobic006G207500 Sobic003G429700--Sobic006G207500 Sobic004G012800 Sobic004G012800 Sobic003G429700--Sobic004G012800 Sobic002G256300 Sobic002G256300 Sobic003G429700--Sobic002G256300 Sobic002G194100--Sobic001G040800 Sobic002G202300 Sobic002G202300 Sobic002G194100--Sobic002G202300 Sobic006G232200 Sobic006G232200 Sobic002G194100--Sobic006G232200 Sobic004G293700 Sobic004G293700 Sobic002G194100--Sobic004G293700 Sobic002G194100--Sobic001G459200 Sobic001G054200 Sobic001G054200 Sobic002G194100--Sobic001G054200 Sobic002G194100--Sobic004G248800 Sobic002G194100--Sobic003G253000 Sobic004G079100 Sobic004G079100 Sobic002G194100--Sobic004G079100 Sobic002G291200--Sobic009G203100 Sobic004G219300 Sobic004G219300 Sobic002G291200--Sobic004G219300 Sobic002G291200--Sobic002G194100 Sobic002G291200--Sobic009G185800 Sobic010G277800 Sobic010G277800 Sobic002G291200--Sobic010G277800 Sobic002G291200--Sobic001G459200 Sobic002G291200--Sobic005G034400 Sobic002G291200--Sobic001G040800 Sobic010G042100 Sobic010G042100 Sobic002G291200--Sobic010G042100 Sobic010G024100 Sobic010G024100 Sobic002G390300--Sobic010G024100 Sobic002G390300--Sobic003G327100 Sobic004G023900 Sobic004G023900 Sobic002G390300--Sobic004G023900 Sobic007G171950 Sobic007G171950 Sobic002G390300--Sobic007G171950 Sobic003G190500 Sobic003G190500 Sobic002G390300--Sobic003G190500 Sobic002G390300--Sobic006G198500 Sobic001G479200 Sobic001G479200 Sobic002G390300--Sobic001G479200 Sobic001G526600 Sobic001G526600 Sobic002G390300--Sobic001G526600 Sobic001G439600 Sobic001G439600 Sobic002G390300--Sobic001G439600 Sobic004G060600 Sobic004G060600 Sobic001G447900--Sobic004G060600 Sobic001G428100 Sobic001G428100 Sobic001G447900--Sobic001G428100 Sobic009G198500 Sobic009G198500 Sobic001G447900--Sobic009G198500 Sobic006G212100 Sobic006G212100 Sobic001G447900--Sobic006G212100 Sobic002G400000 Sobic002G400000 Sobic001G447900--Sobic002G400000 Sobic001G175800 Sobic001G175800 Sobic001G447900--Sobic001G175800 Sobic001G447900--Sobic006G262900 Sobic006G109700 Sobic006G109700 Sobic001G447900--Sobic006G109700 Sobic007G168600 Sobic007G168600 Sobic001G447900--Sobic007G168600
Octagon: transcription factors


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