Gene annotation
Transcriptome id Sobic.006G233100.1
Synonym Sb06g030080
Functional annotation immediate-early protein RSP40, putative, expressed
UniProt C5Y8W2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g54430.1 : immediate-early protein RSP40, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ84860
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G070200 tentative name(PubMedID : 31536532)@OsFBX265 - F-box domain containing protein, expressed -
2 Sobic.004G287700 expressed protein -
3 Sobic.009G172000 FAR1 family protein, expressed -
4 Sobic.006G219500 remorin family protein, putative, expressed -
5 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
6 Sobic.007G063100 kinesin-like protein, identical, putative, expressed -
7 Sobic.001G175100 DEK C terminal domain containing protein, expressed -
8 Sobic.006G273600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
10 Sobic.002G363300 - -
11 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
12 Sobic.001G398400 expressed protein -
13 Sobic.007G145000 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed K00058: serA, D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase
14 Sobic.001G140600 expressed protein -
15 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
16 Sobic.001G473500 domain of unknown function DUF966 domain containing protein, expressed -
17 Sobic.003G102000 expressed protein -
18 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
19 Sobic.010G087500 heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
20 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic006G233100 Sobic006G233100 Sobic007G070200 Sobic007G070200 Sobic006G233100--Sobic007G070200 Sobic004G287700 Sobic004G287700 Sobic006G233100--Sobic004G287700 Sobic009G172000 Sobic009G172000 Sobic006G233100--Sobic009G172000 Sobic006G219500 Sobic006G219500 Sobic006G233100--Sobic006G219500 Sobic001G477400 Sobic001G477400 Sobic006G233100--Sobic001G477400 Sobic007G063100 Sobic007G063100 Sobic006G233100--Sobic007G063100 Sobic001G175100 Sobic001G175100 Sobic006G233100--Sobic001G175100 Sobic006G273600 Sobic006G273600 Sobic006G233100--Sobic006G273600 Sobic008G125700 Sobic008G125700 Sobic006G233100--Sobic008G125700 Sobic007G023100 Sobic007G023100 Sobic007G070200--Sobic007G023100 Sobic001G137600 Sobic001G137600 Sobic007G070200--Sobic001G137600 Sobic003G406600 Sobic003G406600 Sobic007G070200--Sobic003G406600 Sobic004G352100 Sobic004G352100 Sobic007G070200--Sobic004G352100 Sobic005G125000 Sobic005G125000 Sobic007G070200--Sobic005G125000 Sobic010G276600 Sobic010G276600 Sobic007G070200--Sobic010G276600 Sobic006G046600 Sobic006G046600 Sobic007G070200--Sobic006G046600 Sobic003G010700 Sobic003G010700 Sobic007G070200--Sobic003G010700 Sobic007G033700 Sobic007G033700 Sobic007G070200--Sobic007G033700 Sobic010G017400 Sobic010G017400 Sobic004G287700--Sobic010G017400 Sobic004G287700--Sobic001G477400 Sobic002G142200 Sobic002G142200 Sobic004G287700--Sobic002G142200 Sobic001G177900 Sobic001G177900 Sobic004G287700--Sobic001G177900 Sobic004G339500 Sobic004G339500 Sobic004G287700--Sobic004G339500 Sobic010G008900 Sobic010G008900 Sobic004G287700--Sobic010G008900 Sobic002G255500 Sobic002G255500 Sobic004G287700--Sobic002G255500 Sobic001G170800 Sobic001G170800 Sobic004G287700--Sobic001G170800 Sobic003G314900 Sobic003G314900 Sobic004G287700--Sobic003G314900 Sobic007G170100 Sobic007G170100 Sobic009G172000--Sobic007G170100 Sobic009G172000--Sobic006G273600 Sobic002G363300 Sobic002G363300 Sobic009G172000--Sobic002G363300 Sobic006G117900 Sobic006G117900 Sobic009G172000--Sobic006G117900 Sobic005G009600 Sobic005G009600 Sobic009G172000--Sobic005G009600 Sobic006G005900 Sobic006G005900 Sobic009G172000--Sobic006G005900 Sobic009G023900 Sobic009G023900 Sobic009G172000--Sobic009G023900 Sobic003G027100 Sobic003G027100 Sobic009G172000--Sobic003G027100 Sobic004G274600 Sobic004G274600 Sobic009G172000--Sobic004G274600 Sobic008G114900 Sobic008G114900 Sobic006G219500--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic006G219500--Sobic001G155700 Sobic001G493900 Sobic001G493900 Sobic006G219500--Sobic001G493900 Sobic010G129700 Sobic010G129700 Sobic006G219500--Sobic010G129700 Sobic009G146700 Sobic009G146700 Sobic006G219500--Sobic009G146700 Sobic002G313000 Sobic002G313000 Sobic006G219500--Sobic002G313000 Sobic002G319300 Sobic002G319300 Sobic006G219500--Sobic002G319300 Sobic006G219500--Sobic008G125700 Sobic001G496400 Sobic001G496400 Sobic006G219500--Sobic001G496400 Sobic005G005700 Sobic005G005700 Sobic001G477400--Sobic005G005700 Sobic001G398400 Sobic001G398400 Sobic001G477400--Sobic001G398400 Sobic008G006800 Sobic008G006800 Sobic001G477400--Sobic008G006800 Sobic006G124400 Sobic006G124400 Sobic001G477400--Sobic006G124400 Sobic004G198100 Sobic004G198100 Sobic001G477400--Sobic004G198100 Sobic010G119300 Sobic010G119300 Sobic001G477400--Sobic010G119300 Sobic004G273000 Sobic004G273000 Sobic001G477400--Sobic004G273000 Sobic004G271300 Sobic004G271300 Sobic001G477400--Sobic004G271300 Sobic003G260700 Sobic003G260700 Sobic001G477400--Sobic003G260700 Sobic009G175100 Sobic009G175100 Sobic007G063100--Sobic009G175100 Sobic007G063100--Sobic003G260700 Sobic002G426800 Sobic002G426800 Sobic007G063100--Sobic002G426800 Sobic007G063100--Sobic003G314900 Sobic003G444100 Sobic003G444100 Sobic007G063100--Sobic003G444100 Sobic007G063100--Sobic001G170800 Sobic007G063100--Sobic004G339500 Sobic005G000500 Sobic005G000500 Sobic007G063100--Sobic005G000500 Sobic003G084100 Sobic003G084100 Sobic007G063100--Sobic003G084100 Sobic008G070700 Sobic008G070700 Sobic001G175100--Sobic008G070700 Sobic004G003700 Sobic004G003700 Sobic001G175100--Sobic004G003700 Sobic001G175100--Sobic004G198100 Sobic006G221800 Sobic006G221800 Sobic001G175100--Sobic006G221800 Sobic001G101700 Sobic001G101700 Sobic001G175100--Sobic001G101700 Sobic008G088800 Sobic008G088800 Sobic001G175100--Sobic008G088800 Sobic007G147200 Sobic007G147200 Sobic001G175100--Sobic007G147200 Sobic001G143400 Sobic001G143400 Sobic001G175100--Sobic001G143400 Sobic008G138000 Sobic008G138000 Sobic001G175100--Sobic008G138000 Sobic006G273600--Sobic007G170100 Sobic006G273600--Sobic005G009600 Sobic006G273600--Sobic002G363300 Sobic006G273600--Sobic003G010700 Sobic010G235300 Sobic010G235300 Sobic006G273600--Sobic010G235300 Sobic001G286700 Sobic001G286700 Sobic006G273600--Sobic001G286700 Sobic005G199700 Sobic005G199700 Sobic006G273600--Sobic005G199700 Sobic006G273600--Sobic003G027100 Sobic010G166300 Sobic010G166300 Sobic006G273600--Sobic010G166300 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic003G102000 Sobic003G102000 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic008G125700--Sobic004G198100 Sobic008G125700--Sobic008G006800 Sobic008G125700--Sobic002G313000 Sobic008G125700--Sobic004G339500 Sobic008G125700--Sobic005G199700
Octagon: transcription factors


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