Gene annotation
Transcriptome id Sobic.006G239700.1
Synonym Sb06g030590
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt A0A1Z5RFC1
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50170 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os05g10900.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G082200 white-brown complex homolog protein 11, putative, expressed -
2 Sobic.008G036600 expressed protein -
3 Sobic.008G155400 ankyrin, putative, expressed -
4 Sobic.005G171700 OsFBDUF20 - F-box and DUF domain containing protein, expressed -
5 Sobic.004G140400 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
6 Sobic.001G444900 STRUBBELIG-RECEPTOR FAMILY 7("PubMedID : 26759170,PubMedID : 24597475")@STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
7 Sobic.004G178700 protein transport protein Sec61, putative, expressed K10956: protein transport protein SEC61 subunit alpha
8 Sobic.010G146000 CSLD5 - cellulose synthase-like family D, expressed -
9 Sobic.004G011900 - -
10 Sobic.010G116700 - -
11 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
12 Sobic.002G102300 - -
13 Sobic.001G270700 nodulin, putative, expressed -
14 Sobic.001G057400 expressed protein -
15 Sobic.003G091600 expressed protein -
16 Sobic.003G213000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
17 Sobic.010G024400 expressed protein -
18 Sobic.010G134650 - -
19 Sobic.001G065200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
20 Sobic.001G245400 - -


Gene co-expression network
sample Sobic006G239700 Sobic006G239700 Sobic007G082200 Sobic007G082200 Sobic006G239700--Sobic007G082200 Sobic008G036600 Sobic008G036600 Sobic006G239700--Sobic008G036600 Sobic008G155400 Sobic008G155400 Sobic006G239700--Sobic008G155400 Sobic005G171700 Sobic005G171700 Sobic006G239700--Sobic005G171700 Sobic004G140400 Sobic004G140400 Sobic006G239700--Sobic004G140400 Sobic001G444900 Sobic001G444900 Sobic006G239700--Sobic001G444900 Sobic004G178700 Sobic004G178700 Sobic006G239700--Sobic004G178700 Sobic010G146000 Sobic010G146000 Sobic006G239700--Sobic010G146000 Sobic004G011900 Sobic004G011900 Sobic006G239700--Sobic004G011900 Sobic007G082200--Sobic006G239700 Sobic007G082200--Sobic010G146000 Sobic008G100300 Sobic008G100300 Sobic007G082200--Sobic008G100300 Sobic001G065200 Sobic001G065200 Sobic007G082200--Sobic001G065200 Sobic007G082200--Sobic001G444900 Sobic003G091600 Sobic003G091600 Sobic007G082200--Sobic003G091600 Sobic007G082200--Sobic004G011900 Sobic007G082200--Sobic008G036600 Sobic004G189000 Sobic004G189000 Sobic007G082200--Sobic004G189000 Sobic010G202200 Sobic010G202200 Sobic008G036600--Sobic010G202200 Sobic003G236000 Sobic003G236000 Sobic008G036600--Sobic003G236000 Sobic001G024400 Sobic001G024400 Sobic008G036600--Sobic001G024400 Sobic010G024400 Sobic010G024400 Sobic008G036600--Sobic010G024400 Sobic005G225500 Sobic005G225500 Sobic008G036600--Sobic005G225500 Sobic005G110424 Sobic005G110424 Sobic008G036600--Sobic005G110424 Sobic007G039200 Sobic007G039200 Sobic008G036600--Sobic007G039200 Sobic005G185500 Sobic005G185500 Sobic008G036600--Sobic005G185500 Sobic009G230800 Sobic009G230800 Sobic008G036600--Sobic009G230800 Sobic002G158300 Sobic002G158300 Sobic008G155400--Sobic002G158300 Sobic003G342500 Sobic003G342500 Sobic008G155400--Sobic003G342500 Sobic008G155400--Sobic005G171700 Sobic008G155400--Sobic004G140400 Sobic002G102300 Sobic002G102300 Sobic008G155400--Sobic002G102300 Sobic008G155400--Sobic008G036600 Sobic001G270700 Sobic001G270700 Sobic008G155400--Sobic001G270700 Sobic003G213000 Sobic003G213000 Sobic008G155400--Sobic003G213000 Sobic002G108100 Sobic002G108100 Sobic008G155400--Sobic002G108100 Sobic005G171700--Sobic008G155400 Sobic005G171700--Sobic004G140400 Sobic005G171700--Sobic004G178700 Sobic005G171700--Sobic001G270700 Sobic001G490950 Sobic001G490950 Sobic005G171700--Sobic001G490950 Sobic005G171700--Sobic002G102300 Sobic003G392275 Sobic003G392275 Sobic005G171700--Sobic003G392275 Sobic001G226900 Sobic001G226900 Sobic005G171700--Sobic001G226900 Sobic008G056800 Sobic008G056800 Sobic005G171700--Sobic008G056800 Sobic004G140400--Sobic002G102300 Sobic004G140400--Sobic005G225500 Sobic007G101600 Sobic007G101600 Sobic004G140400--Sobic007G101600 Sobic008G159701 Sobic008G159701 Sobic004G140400--Sobic008G159701 Sobic002G304801 Sobic002G304801 Sobic004G140400--Sobic002G304801 Sobic004G140400--Sobic010G202200 Sobic001G286900 Sobic001G286900 Sobic004G140400--Sobic001G286900 Sobic003G238250 Sobic003G238250 Sobic004G140400--Sobic003G238250 Sobic002G257001 Sobic002G257001 Sobic004G140400--Sobic002G257001 Sobic001G121800 Sobic001G121800 Sobic001G444900--Sobic001G121800 Sobic001G405100 Sobic001G405100 Sobic001G444900--Sobic001G405100 Sobic005G209600 Sobic005G209600 Sobic001G444900--Sobic005G209600 Sobic001G444900--Sobic003G236000 Sobic004G336800 Sobic004G336800 Sobic001G444900--Sobic004G336800 Sobic001G024250 Sobic001G024250 Sobic001G444900--Sobic001G024250 Sobic009G096433 Sobic009G096433 Sobic001G444900--Sobic009G096433 Sobic003G356800 Sobic003G356800 Sobic001G444900--Sobic003G356800 Sobic007G146300 Sobic007G146300 Sobic001G444900--Sobic007G146300 Sobic004G178700--Sobic002G102300 Sobic004G178700--Sobic004G140400 Sobic004G178700--Sobic003G392275 Sobic010G006800 Sobic010G006800 Sobic004G178700--Sobic010G006800 Sobic010G134700 Sobic010G134700 Sobic004G178700--Sobic010G134700 Sobic004G178700--Sobic001G270700 Sobic004G178700--Sobic003G238250 Sobic004G178700--Sobic005G171700 Sobic004G098800 Sobic004G098800 Sobic004G178700--Sobic004G098800 Sobic010G146000--Sobic004G011900 Sobic008G100600 Sobic008G100600 Sobic010G146000--Sobic008G100600 Sobic010G146000--Sobic008G100300 Sobic010G146000--Sobic003G213000 Sobic010G146000--Sobic001G405100 Sobic010G146000--Sobic005G110424 Sobic004G082800 Sobic004G082800 Sobic010G146000--Sobic004G082800 Sobic010G146000--Sobic010G202200 Sobic010G146000--Sobic008G036600 Sobic004G011900--Sobic010G146000 Sobic004G011900--Sobic008G100600 Sobic004G011900--Sobic008G100300 Sobic004G011900--Sobic003G213000 Sobic004G011900--Sobic004G082800 Sobic004G011900--Sobic008G036600 Sobic004G011900--Sobic007G082200 Sobic004G011900--Sobic005G110424 Sobic004G011900--Sobic001G405100
Octagon: transcription factors


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