Gene annotation
Transcriptome id Sobic.006G276300.1
Synonym Sb06g033760
Functional annotation integral membrane protein, putative, expressed
UniProt C5YB14
Pfam PF01988
Panther DB PTHR31851 PTHR31851:SF6
NCBI CDD KOG4473; Uncharacterized membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G43660 : Vacuolar iron transporter (VIT) family protein
RAP-DB (Rice) LOC_Os04g59020.1 : integral membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a020953 , Zm00025a057479 , Zm00025a010503
Brachypodium KQJ83808 , KQJ89313 , KQK00532
Barley HORVU6Hr1G061000.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G243100 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
2 Sobic.005G110541 - K16054: methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
3 Sobic.008G004300 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
4 Sobic.003G258800 glutamate synthase, chloroplast precursor, putative, expressed K00264: glutamate synthase (NADH)
5 Sobic.001G162500 LIM domain-containing protein, putative, expressed -
6 Sobic.003G017400 phosphoacetylglucosamine mutase, putative, expressed K01836: phosphoacetylglucosamine mutase
7 Sobic.004G040500 expressed protein -
8 Sobic.001G485800 nitrilase, putative, expressed K13566: NIT2, omega-amidase
9 Sobic.001G301200 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
10 Sobic.009G033100 OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
11 Sobic.001G093800 WD domain containing protein, putative, expressed -
12 Sobic.004G153100 disease resistance protein, putative, expressed -
13 Sobic.006G219300 ABC transporter family protein, putative, expressed -
14 Sobic.003G292200 peptidase, putative, expressed K01301: N-acetylated-alpha-linked acidic dipeptidase
15 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
16 Sobic.006G015600 ZOS4-03 - C2H2 zinc finger protein, expressed -
17 Sobic.006G164200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
18 Sobic.002G246700 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
19 Sobic.010G055100 OsWAK63 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.005G061801 - -


Gene co-expression network
sample Sobic006G276300 Sobic006G276300 Sobic001G243100 Sobic001G243100 Sobic006G276300--Sobic001G243100 Sobic005G110541 Sobic005G110541 Sobic006G276300--Sobic005G110541 Sobic008G004300 Sobic008G004300 Sobic006G276300--Sobic008G004300 Sobic003G258800 Sobic003G258800 Sobic006G276300--Sobic003G258800 Sobic001G162500 Sobic001G162500 Sobic006G276300--Sobic001G162500 Sobic003G017400 Sobic003G017400 Sobic006G276300--Sobic003G017400 Sobic004G040500 Sobic004G040500 Sobic006G276300--Sobic004G040500 Sobic001G485800 Sobic001G485800 Sobic006G276300--Sobic001G485800 Sobic001G301200 Sobic001G301200 Sobic006G276300--Sobic001G301200 Sobic001G243100--Sobic005G110541 Sobic007G193200 Sobic007G193200 Sobic001G243100--Sobic007G193200 Sobic005G100800 Sobic005G100800 Sobic001G243100--Sobic005G100800 Sobic001G353200 Sobic001G353200 Sobic001G243100--Sobic001G353200 Sobic002G041100 Sobic002G041100 Sobic001G243100--Sobic002G041100 Sobic002G194600 Sobic002G194600 Sobic001G243100--Sobic002G194600 Sobic005G115600 Sobic005G115600 Sobic001G243100--Sobic005G115600 Sobic001G443100 Sobic001G443100 Sobic001G243100--Sobic001G443100 Sobic006G030800 Sobic006G030800 Sobic001G243100--Sobic006G030800 Sobic005G110541--Sobic005G100800 Sobic005G110541--Sobic007G193200 Sobic005G110541--Sobic001G353200 Sobic010G187500 Sobic010G187500 Sobic005G110541--Sobic010G187500 Sobic004G261500 Sobic004G261500 Sobic005G110541--Sobic004G261500 Sobic005G110541--Sobic001G443100 Sobic007G212000 Sobic007G212000 Sobic005G110541--Sobic007G212000 Sobic005G110541--Sobic001G243100 Sobic004G299500 Sobic004G299500 Sobic005G110541--Sobic004G299500 Sobic004G290000 Sobic004G290000 Sobic008G004300--Sobic004G290000 Sobic002G166300 Sobic002G166300 Sobic008G004300--Sobic002G166300 Sobic008G004300--Sobic001G301200 Sobic005G004100 Sobic005G004100 Sobic008G004300--Sobic005G004100 Sobic009G139900 Sobic009G139900 Sobic008G004300--Sobic009G139900 Sobic001G434200 Sobic001G434200 Sobic008G004300--Sobic001G434200 Sobic002G209400 Sobic002G209400 Sobic008G004300--Sobic002G209400 Sobic001G333100 Sobic001G333100 Sobic008G004300--Sobic001G333100 Sobic010G206300 Sobic010G206300 Sobic008G004300--Sobic010G206300 Sobic003G258800--Sobic005G115600 Sobic005G071800 Sobic005G071800 Sobic003G258800--Sobic005G071800 Sobic002G083600 Sobic002G083600 Sobic003G258800--Sobic002G083600 Sobic010G055100 Sobic010G055100 Sobic003G258800--Sobic010G055100 Sobic006G256200 Sobic006G256200 Sobic003G258800--Sobic006G256200 Sobic002G383900 Sobic002G383900 Sobic003G258800--Sobic002G383900 Sobic003G258800--Sobic006G030800 Sobic003G258800--Sobic005G110541 Sobic008G072600 Sobic008G072600 Sobic003G258800--Sobic008G072600 Sobic003G109100 Sobic003G109100 Sobic001G162500--Sobic003G109100 Sobic010G138000 Sobic010G138000 Sobic001G162500--Sobic010G138000 Sobic006G247900 Sobic006G247900 Sobic001G162500--Sobic006G247900 Sobic010G228400 Sobic010G228400 Sobic001G162500--Sobic010G228400 Sobic001G381200 Sobic001G381200 Sobic001G162500--Sobic001G381200 Sobic008G004600 Sobic008G004600 Sobic001G162500--Sobic008G004600 Sobic003G195000 Sobic003G195000 Sobic001G162500--Sobic003G195000 Sobic009G094300 Sobic009G094300 Sobic001G162500--Sobic009G094300 Sobic005G003300 Sobic005G003300 Sobic001G162500--Sobic005G003300 Sobic006G219300 Sobic006G219300 Sobic003G017400--Sobic006G219300 Sobic003G017400--Sobic004G290000 Sobic003G017400--Sobic008G004300 Sobic009G033100 Sobic009G033100 Sobic003G017400--Sobic009G033100 Sobic007G092600 Sobic007G092600 Sobic003G017400--Sobic007G092600 Sobic009G126700 Sobic009G126700 Sobic003G017400--Sobic009G126700 Sobic003G445000 Sobic003G445000 Sobic003G017400--Sobic003G445000 Sobic010G123400 Sobic010G123400 Sobic003G017400--Sobic010G123400 Sobic002G009300 Sobic002G009300 Sobic003G017400--Sobic002G009300 Sobic008G092600 Sobic008G092600 Sobic004G040500--Sobic008G092600 Sobic002G147600 Sobic002G147600 Sobic004G040500--Sobic002G147600 Sobic002G335600 Sobic002G335600 Sobic004G040500--Sobic002G335600 Sobic001G493700 Sobic001G493700 Sobic004G040500--Sobic001G493700 Sobic003G072200 Sobic003G072200 Sobic004G040500--Sobic003G072200 Sobic003G233400 Sobic003G233400 Sobic004G040500--Sobic003G233400 Sobic004G023100 Sobic004G023100 Sobic004G040500--Sobic004G023100 Sobic001G287500 Sobic001G287500 Sobic004G040500--Sobic001G287500 Sobic003G171400 Sobic003G171400 Sobic004G040500--Sobic003G171400 Sobic010G106900 Sobic010G106900 Sobic001G485800--Sobic010G106900 Sobic006G146800 Sobic006G146800 Sobic001G485800--Sobic006G146800 Sobic001G023000 Sobic001G023000 Sobic001G485800--Sobic001G023000 Sobic001G322000 Sobic001G322000 Sobic001G485800--Sobic001G322000 Sobic004G133700 Sobic004G133700 Sobic001G485800--Sobic004G133700 Sobic003G196900 Sobic003G196900 Sobic001G485800--Sobic003G196900 Sobic006G248400 Sobic006G248400 Sobic001G485800--Sobic006G248400 Sobic001G096300 Sobic001G096300 Sobic001G485800--Sobic001G096300 Sobic008G118200 Sobic008G118200 Sobic001G485800--Sobic008G118200 Sobic004G337800 Sobic004G337800 Sobic001G301200--Sobic004G337800 Sobic001G449900 Sobic001G449900 Sobic001G301200--Sobic001G449900 Sobic006G021700 Sobic006G021700 Sobic001G301200--Sobic006G021700 Sobic003G029600 Sobic003G029600 Sobic001G301200--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic001G301200--Sobic008G124800 Sobic001G404600 Sobic001G404600 Sobic001G301200--Sobic001G404600 Sobic002G340900 Sobic002G340900 Sobic001G301200--Sobic002G340900 Sobic002G308500 Sobic002G308500 Sobic001G301200--Sobic002G308500 Sobic001G301200--Sobic003G171400
Octagon: transcription factors


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