Gene annotation
Transcriptome id Sobic.003G292200.1
Synonym Sb03g034260
Functional annotation peptidase, putative, expressed
UniProt C5XK00
Pfam PF02225 PF04389 PF04253
Panther DB PTHR10404 PTHR10404:SF45
NCBI CDD -
KEGG Orthology K01301; N-acetylated-alpha-linked acidic dipeptidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19740 : Peptidase M28 family protein
RAP-DB (Rice) LOC_Os01g54010.1 : peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a040069
Brachypodium KQK09654 , KQK09680 , KQK09681
Barley -
Wheat TraesCS3A02G275800 , TraesCS3A02G275800 , TraesCS3A02G275800 , TraesCS3B02G309500 , TraesCS3B02G309500 , TraesCS3B02G309500 , TraesCS3B02G309500 , TraesCS3B02G309500 , TraesCS3D02G275800 , TraesCS3D02G275700 , TraesCS3D02G275700 , TraesCS3A02G276700 , TraesCS3A02G276700 , TraesCS3D02G275800 , TraesCS3D02G275800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G086700 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
2 Sobic.003G007700 ethylene-responsive protein related, putative, expressed -
3 Sobic.008G004300 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
4 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
5 Sobic.008G088857 - -
6 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
7 Sobic.002G128900 thioesterase family protein, putative, expressed -
8 Sobic.009G002300 expressed protein -
9 Sobic.010G186000 expressed protein -
10 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
11 Sobic.006G271800 potasium efflux antiporter protein, putative, expressed -
12 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
13 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
14 Sobic.006G036100 expressed protein K11266: MAternally affected uncoordination
15 Sobic.009G250900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
16 Sobic.002G218500 lecithine cholesterol acyltransferase, putative, expressed K00679: phospholipid:diacylglycerol acyltransferase
17 Sobic.008G193300 sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@"OsSUT2(Ortholog in rice:Eom et al., 2011)"(PubMedID : 31659914)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
18 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
19 Sobic.008G000400 GHMP kinases ATP-binding protein, putative, expressed K16190: glucuronokinase
20 Sobic.002G131500 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G292200 Sobic003G292200 Sobic004G086700 Sobic004G086700 Sobic003G292200--Sobic004G086700 Sobic003G007700 Sobic003G007700 Sobic003G292200--Sobic003G007700 Sobic008G004300 Sobic008G004300 Sobic003G292200--Sobic008G004300 Sobic002G166300 Sobic002G166300 Sobic003G292200--Sobic002G166300 Sobic008G088857 Sobic008G088857 Sobic003G292200--Sobic008G088857 Sobic010G123400 Sobic010G123400 Sobic003G292200--Sobic010G123400 Sobic002G128900 Sobic002G128900 Sobic003G292200--Sobic002G128900 Sobic009G002300 Sobic009G002300 Sobic003G292200--Sobic009G002300 Sobic010G186000 Sobic010G186000 Sobic003G292200--Sobic010G186000 Sobic001G043800 Sobic001G043800 Sobic004G086700--Sobic001G043800 Sobic001G069600 Sobic001G069600 Sobic004G086700--Sobic001G069600 Sobic008G051200 Sobic008G051200 Sobic004G086700--Sobic008G051200 Sobic010G265300 Sobic010G265300 Sobic004G086700--Sobic010G265300 Sobic004G086700--Sobic010G186000 Sobic007G136800 Sobic007G136800 Sobic004G086700--Sobic007G136800 Sobic004G086700--Sobic009G002300 Sobic003G122500 Sobic003G122500 Sobic004G086700--Sobic003G122500 Sobic004G086700--Sobic002G166300 Sobic006G258700 Sobic006G258700 Sobic003G007700--Sobic006G258700 Sobic010G269400 Sobic010G269400 Sobic003G007700--Sobic010G269400 Sobic005G012200 Sobic005G012200 Sobic003G007700--Sobic005G012200 Sobic002G200700 Sobic002G200700 Sobic003G007700--Sobic002G200700 Sobic001G351400 Sobic001G351400 Sobic003G007700--Sobic001G351400 Sobic002G136100 Sobic002G136100 Sobic003G007700--Sobic002G136100 Sobic009G034600 Sobic009G034600 Sobic003G007700--Sobic009G034600 Sobic003G014300 Sobic003G014300 Sobic003G007700--Sobic003G014300 Sobic010G058200 Sobic010G058200 Sobic003G007700--Sobic010G058200 Sobic004G290000 Sobic004G290000 Sobic008G004300--Sobic004G290000 Sobic008G004300--Sobic002G166300 Sobic001G301200 Sobic001G301200 Sobic008G004300--Sobic001G301200 Sobic005G004100 Sobic005G004100 Sobic008G004300--Sobic005G004100 Sobic009G139900 Sobic009G139900 Sobic008G004300--Sobic009G139900 Sobic001G434200 Sobic001G434200 Sobic008G004300--Sobic001G434200 Sobic002G209400 Sobic002G209400 Sobic008G004300--Sobic002G209400 Sobic001G333100 Sobic001G333100 Sobic008G004300--Sobic001G333100 Sobic010G206300 Sobic010G206300 Sobic008G004300--Sobic010G206300 Sobic003G273600 Sobic003G273600 Sobic002G166300--Sobic003G273600 Sobic003G233600 Sobic003G233600 Sobic002G166300--Sobic003G233600 Sobic002G166300--Sobic009G139900 Sobic004G296400 Sobic004G296400 Sobic002G166300--Sobic004G296400 Sobic001G079200 Sobic001G079200 Sobic002G166300--Sobic001G079200 Sobic009G199200 Sobic009G199200 Sobic002G166300--Sobic009G199200 Sobic008G004600 Sobic008G004600 Sobic002G166300--Sobic008G004600 Sobic001G000200 Sobic001G000200 Sobic002G166300--Sobic001G000200 Sobic004G136300 Sobic004G136300 Sobic002G166300--Sobic004G136300 Sobic008G088851 Sobic008G088851 Sobic008G088857--Sobic008G088851 Sobic002G009300 Sobic002G009300 Sobic008G088857--Sobic002G009300 Sobic008G088857--Sobic009G139900 Sobic004G127700 Sobic004G127700 Sobic008G088857--Sobic004G127700 Sobic001G404600 Sobic001G404600 Sobic008G088857--Sobic001G404600 Sobic006G213400 Sobic006G213400 Sobic008G088857--Sobic006G213400 Sobic007G071900 Sobic007G071900 Sobic008G088857--Sobic007G071900 Sobic006G247900 Sobic006G247900 Sobic008G088857--Sobic006G247900 Sobic010G080700 Sobic010G080700 Sobic008G088857--Sobic010G080700 Sobic010G123400--Sobic003G273600 Sobic010G123400--Sobic002G166300 Sobic003G376400 Sobic003G376400 Sobic010G123400--Sobic003G376400 Sobic002G339500 Sobic002G339500 Sobic010G123400--Sobic002G339500 Sobic006G222100 Sobic006G222100 Sobic010G123400--Sobic006G222100 Sobic010G123400--Sobic003G233600 Sobic009G017400 Sobic009G017400 Sobic010G123400--Sobic009G017400 Sobic010G123400--Sobic001G079200 Sobic010G084000 Sobic010G084000 Sobic010G123400--Sobic010G084000 Sobic010G140600 Sobic010G140600 Sobic002G128900--Sobic010G140600 Sobic002G279700 Sobic002G279700 Sobic002G128900--Sobic002G279700 Sobic001G295300 Sobic001G295300 Sobic002G128900--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G128900--Sobic002G200900 Sobic004G281900 Sobic004G281900 Sobic002G128900--Sobic004G281900 Sobic002G072400 Sobic002G072400 Sobic002G128900--Sobic002G072400 Sobic008G096800 Sobic008G096800 Sobic002G128900--Sobic008G096800 Sobic002G128900--Sobic010G269400 Sobic008G144800 Sobic008G144800 Sobic002G128900--Sobic008G144800 Sobic002G148750 Sobic002G148750 Sobic009G002300--Sobic002G148750 Sobic009G129100 Sobic009G129100 Sobic009G002300--Sobic009G129100 Sobic003G168100 Sobic003G168100 Sobic009G002300--Sobic003G168100 Sobic008G088806 Sobic008G088806 Sobic009G002300--Sobic008G088806 Sobic006G031800 Sobic006G031800 Sobic009G002300--Sobic006G031800 Sobic001G145000 Sobic001G145000 Sobic009G002300--Sobic001G145000 Sobic009G002300--Sobic007G136800 Sobic005G059800 Sobic005G059800 Sobic009G002300--Sobic005G059800 Sobic010G140400 Sobic010G140400 Sobic009G002300--Sobic010G140400 Sobic008G070800 Sobic008G070800 Sobic010G186000--Sobic008G070800 Sobic010G186000--Sobic004G086700 Sobic002G091600 Sobic002G091600 Sobic010G186000--Sobic002G091600 Sobic010G186000--Sobic007G136800 Sobic002G383800 Sobic002G383800 Sobic010G186000--Sobic002G383800 Sobic009G084500 Sobic009G084500 Sobic010G186000--Sobic009G084500 Sobic004G040900 Sobic004G040900 Sobic010G186000--Sobic004G040900 Sobic002G131200 Sobic002G131200 Sobic010G186000--Sobic002G131200 Sobic003G110800 Sobic003G110800 Sobic010G186000--Sobic003G110800
Octagon: transcription factors


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