Gene annotation
Transcriptome id Sobic.007G059600.2,Sobic.007G059600.1
Synonym ATSERK2, SERK2, Sb07g004750
Functional annotation OsBAK1(Ortholog in rice:Yuan et al. (2017)) (PubMedID : 31659903)
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
UniProt A0A1B6PFV2 , C5YHV3
Pfam PF00069 PF08263 PF00560
Panther DB PTHR27001:SF151 PTHR27001
NCBI CDD KOG1187; Serine/threonine protein kinase KOG2345Serine/threonine protein kinase/TGF-beta stimulated factor KOG0580Serine/threonine protein kinase
KEGG Orthology K13418; somatic embryogenesis receptor kinase 1
Gene Ontology GO:0004672; protein kinase activity GO:0005524ATP binding GO:0006468protein phosphorylation GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT1G71830 : somatic embryogenesis receptor-like kinase 2,somatic embryogenesis receptor-like kinase 1
RAP-DB (Rice) LOC_Os08g07760.1 : BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a030019 , Zm00025a055015
Brachypodium KQJ95194 , PNT61220 , KQJ82949
Barley HORVU7Hr1G068990.9 , HORVU7Hr1G068990.11 , HORVU7Hr1G068990.10 , HORVU7Hr1G068990.13 , HORVU7Hr1G068990.12 , HORVU7Hr1G068990.15 , HORVU7Hr1G068990.14 , HORVU7Hr1G068990.16 , HORVU7Hr1G068990.5 , HORVU7Hr1G068990.4 , HORVU7Hr1G068990.7 , HORVU7Hr1G068990.6 , HORVU7Hr1G068990.1 , HORVU7Hr1G068990.2 , HORVU7Hr1G068990.8
Wheat TraesCS7A02G293300 , TraesCS7A02G293300 , TraesCS7A02G293300 , TraesCS7B02G182300 , TraesCS7D02G291200 , TraesCS7D02G291200 , TraesCS7D02G291200 , TraesCS7D02G291200
Populus PNS91206 , PNT35597 , PNT27772 , PNT27771


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cDNA sequences
Sobic.007G059600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G425200 expressed protein -
2 Sobic.007G159200 PWWP domain containing protein, expressed -
3 Sobic.003G341700 exo70 exocyst complex subunit domain containing protein, expressed -
4 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
5 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
6 Sobic.005G111000 receptor protein kinase TMK1 precursor, putative, expressed -
7 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
8 Sobic.003G411800 receptor-like protein kinase 2 precursor, putative, expressed -
9 Sobic.008G080500 expressed protein -
10 Sobic.006G067700 "protein kinase (like ACGVIII kinase called KIPK, a KCBP-interacting protein kinase)"(PubMedID : 28676627)@AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.003G218700 LSD1 zinc finger domain containing protein, expressed -
12 Sobic.008G088842 - -
13 Sobic.002G162500 - -
14 Sobic.006G280100 SET domain containing protein, expressed -
15 Sobic.006G223300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
16 Sobic.003G104100 expressed protein -
17 Sobic.003G323300 expressed protein -
18 Sobic.002G082100 serine/threonine-protein kinase, putative, expressed -
19 Sobic.003G096300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
20 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein


Gene co-expression network
sample Sobic007G059600 Sobic007G059600 Sobic002G425200 Sobic002G425200 Sobic007G059600--Sobic002G425200 Sobic007G159200 Sobic007G159200 Sobic007G059600--Sobic007G159200 Sobic003G341700 Sobic003G341700 Sobic007G059600--Sobic003G341700 Sobic003G177000 Sobic003G177000 Sobic007G059600--Sobic003G177000 Sobic002G098500 Sobic002G098500 Sobic007G059600--Sobic002G098500 Sobic005G111000 Sobic005G111000 Sobic007G059600--Sobic005G111000 Sobic008G038200 Sobic008G038200 Sobic007G059600--Sobic008G038200 Sobic003G411800 Sobic003G411800 Sobic007G059600--Sobic003G411800 Sobic008G080500 Sobic008G080500 Sobic007G059600--Sobic008G080500 Sobic002G425200--Sobic003G177000 Sobic002G425200--Sobic007G159200 Sobic002G425200--Sobic008G038200 Sobic008G088842 Sobic008G088842 Sobic002G425200--Sobic008G088842 Sobic006G280100 Sobic006G280100 Sobic002G425200--Sobic006G280100 Sobic004G199200 Sobic004G199200 Sobic002G425200--Sobic004G199200 Sobic006G067700 Sobic006G067700 Sobic002G425200--Sobic006G067700 Sobic002G425200--Sobic008G080500 Sobic006G112700 Sobic006G112700 Sobic002G425200--Sobic006G112700 Sobic007G159200--Sobic008G080500 Sobic001G248100 Sobic001G248100 Sobic007G159200--Sobic001G248100 Sobic007G159200--Sobic006G280100 Sobic010G051400 Sobic010G051400 Sobic007G159200--Sobic010G051400 Sobic004G355800 Sobic004G355800 Sobic007G159200--Sobic004G355800 Sobic007G159200--Sobic002G425200 Sobic010G262100 Sobic010G262100 Sobic007G159200--Sobic010G262100 Sobic001G300000 Sobic001G300000 Sobic007G159200--Sobic001G300000 Sobic009G007700 Sobic009G007700 Sobic007G159200--Sobic009G007700 Sobic003G341700--Sobic006G112700 Sobic003G341700--Sobic006G067700 Sobic002G162500 Sobic002G162500 Sobic003G341700--Sobic002G162500 Sobic003G341700--Sobic008G080500 Sobic001G258900 Sobic001G258900 Sobic003G341700--Sobic001G258900 Sobic005G200900 Sobic005G200900 Sobic003G341700--Sobic005G200900 Sobic010G038100 Sobic010G038100 Sobic003G341700--Sobic010G038100 Sobic003G127500 Sobic003G127500 Sobic003G341700--Sobic003G127500 Sobic003G341700--Sobic004G355800 Sobic003G177000--Sobic002G425200 Sobic003G177000--Sobic008G038200 Sobic003G177000--Sobic001G300000 Sobic001G541000 Sobic001G541000 Sobic003G177000--Sobic001G541000 Sobic007G161600 Sobic007G161600 Sobic003G177000--Sobic007G161600 Sobic003G177000--Sobic006G280100 Sobic001G523700 Sobic001G523700 Sobic003G177000--Sobic001G523700 Sobic003G177000--Sobic007G159200 Sobic008G045000 Sobic008G045000 Sobic003G177000--Sobic008G045000 Sobic002G098500--Sobic008G038200 Sobic007G065300 Sobic007G065300 Sobic002G098500--Sobic007G065300 Sobic003G096300 Sobic003G096300 Sobic002G098500--Sobic003G096300 Sobic005G204100 Sobic005G204100 Sobic002G098500--Sobic005G204100 Sobic010G135300 Sobic010G135300 Sobic002G098500--Sobic010G135300 Sobic010G020600 Sobic010G020600 Sobic002G098500--Sobic010G020600 Sobic002G216600 Sobic002G216600 Sobic002G098500--Sobic002G216600 Sobic001G221900 Sobic001G221900 Sobic002G098500--Sobic001G221900 Sobic007G032100 Sobic007G032100 Sobic002G098500--Sobic007G032100 Sobic003G218700 Sobic003G218700 Sobic005G111000--Sobic003G218700 Sobic005G111000--Sobic006G280100 Sobic005G111000--Sobic007G059600 Sobic005G111000--Sobic008G088842 Sobic002G079100 Sobic002G079100 Sobic005G111000--Sobic002G079100 Sobic005G111000--Sobic002G425200 Sobic003G104100 Sobic003G104100 Sobic005G111000--Sobic003G104100 Sobic009G190200 Sobic009G190200 Sobic005G111000--Sobic009G190200 Sobic009G101000 Sobic009G101000 Sobic005G111000--Sobic009G101000 Sobic008G038200--Sobic007G065300 Sobic008G038200--Sobic002G098500 Sobic001G298800 Sobic001G298800 Sobic008G038200--Sobic001G298800 Sobic008G038200--Sobic003G096300 Sobic001G518000 Sobic001G518000 Sobic008G038200--Sobic001G518000 Sobic006G241800 Sobic006G241800 Sobic008G038200--Sobic006G241800 Sobic008G038200--Sobic003G177000 Sobic008G038200--Sobic010G135300 Sobic007G128100 Sobic007G128100 Sobic008G038200--Sobic007G128100 Sobic004G179800 Sobic004G179800 Sobic003G411800--Sobic004G179800 Sobic010G024500 Sobic010G024500 Sobic003G411800--Sobic010G024500 Sobic002G020600 Sobic002G020600 Sobic003G411800--Sobic002G020600 Sobic005G163400 Sobic005G163400 Sobic003G411800--Sobic005G163400 Sobic003G411800--Sobic003G104100 Sobic008G190000 Sobic008G190000 Sobic003G411800--Sobic008G190000 Sobic003G366000 Sobic003G366000 Sobic003G411800--Sobic003G366000 Sobic003G411800--Sobic008G038200 Sobic003G411800--Sobic006G067700 Sobic008G080500--Sobic007G159200 Sobic008G080500--Sobic010G262100 Sobic008G080500--Sobic004G355800 Sobic008G080500--Sobic006G112700 Sobic008G080500--Sobic002G079100 Sobic008G080500--Sobic005G200900 Sobic010G269300 Sobic010G269300 Sobic008G080500--Sobic010G269300 Sobic003G299500 Sobic003G299500 Sobic008G080500--Sobic003G299500 Sobic002G235900 Sobic002G235900 Sobic008G080500--Sobic002G235900
Octagon: transcription factors


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