Gene annotation
Transcriptome id Sobic.007G088400.1
Synonym Sb07g007700
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsFBX291 - F-box domain containing protein, expressed
UniProt C5YJH4
Pfam PF03478
Panther DB PTHR33110 PTHR33110:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g31690.1 : OsFBX291 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G082600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
2 Sobic.001G413800 expressed protein K13141: integrator complex subunit 4
3 Sobic.002G270800 amino acid transporter, putative, expressed -
4 Sobic.004G312100 HYS1, putative, expressed -
5 Sobic.005G084900 OsDegp12 - Putative Deg protease homologue, expressed -
6 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
7 Sobic.002G107532 - -
8 Sobic.006G225800 OsFBO11 - F-box and other domain containing protein, expressed -
9 Sobic.002G244700 cytosolic phospholipase A2 beta, putative, expressed K19219: peptidyl-lysine (3S)-dioxygenase / protease
10 Sobic.001G034500 SEC14 cytosolic factor family protein, putative, expressed -
11 Sobic.003G009400 - -
12 Sobic.003G033700 expressed protein K15326: tRNA-splicing endonuclease subunit Sen54
13 Sobic.002G009900 phytosulfokine receptor precursor, putative, expressed -
14 Sobic.008G040700 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
15 Sobic.003G392550 - -
16 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
17 Sobic.004G289400 mitochondrial carrier protein, putative, expressed -
18 Sobic.004G257200 phosphatidylinositol transfer, putative, expressed -
19 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
20 Sobic.003G049600 CESA1 - cellulose synthase, expressed K10999: cellulose synthase A


Gene co-expression network
sample Sobic007G088400 Sobic007G088400 Sobic009G082600 Sobic009G082600 Sobic007G088400--Sobic009G082600 Sobic001G413800 Sobic001G413800 Sobic007G088400--Sobic001G413800 Sobic002G270800 Sobic002G270800 Sobic007G088400--Sobic002G270800 Sobic004G312100 Sobic004G312100 Sobic007G088400--Sobic004G312100 Sobic005G084900 Sobic005G084900 Sobic007G088400--Sobic005G084900 Sobic001G477700 Sobic001G477700 Sobic007G088400--Sobic001G477700 Sobic002G107532 Sobic002G107532 Sobic007G088400--Sobic002G107532 Sobic006G225800 Sobic006G225800 Sobic007G088400--Sobic006G225800 Sobic002G244700 Sobic002G244700 Sobic007G088400--Sobic002G244700 Sobic002G039200 Sobic002G039200 Sobic009G082600--Sobic002G039200 Sobic010G033300 Sobic010G033300 Sobic009G082600--Sobic010G033300 Sobic001G119700 Sobic001G119700 Sobic009G082600--Sobic001G119700 Sobic001G382400 Sobic001G382400 Sobic009G082600--Sobic001G382400 Sobic003G319000 Sobic003G319000 Sobic009G082600--Sobic003G319000 Sobic002G272600 Sobic002G272600 Sobic009G082600--Sobic002G272600 Sobic004G305400 Sobic004G305400 Sobic009G082600--Sobic004G305400 Sobic004G053300 Sobic004G053300 Sobic009G082600--Sobic004G053300 Sobic003G092700 Sobic003G092700 Sobic009G082600--Sobic003G092700 Sobic001G413800--Sobic001G477700 Sobic006G180700 Sobic006G180700 Sobic001G413800--Sobic006G180700 Sobic001G034500 Sobic001G034500 Sobic001G413800--Sobic001G034500 Sobic006G154100 Sobic006G154100 Sobic001G413800--Sobic006G154100 Sobic006G281700 Sobic006G281700 Sobic001G413800--Sobic006G281700 Sobic007G042900 Sobic007G042900 Sobic001G413800--Sobic007G042900 Sobic010G204400 Sobic010G204400 Sobic001G413800--Sobic010G204400 Sobic004G068500 Sobic004G068500 Sobic001G413800--Sobic004G068500 Sobic002G363000 Sobic002G363000 Sobic001G413800--Sobic002G363000 Sobic003G223900 Sobic003G223900 Sobic002G270800--Sobic003G223900 Sobic004G305200 Sobic004G305200 Sobic002G270800--Sobic004G305200 Sobic009G120600 Sobic009G120600 Sobic002G270800--Sobic009G120600 Sobic010G066400 Sobic010G066400 Sobic002G270800--Sobic010G066400 Sobic004G262600 Sobic004G262600 Sobic002G270800--Sobic004G262600 Sobic010G248000 Sobic010G248000 Sobic002G270800--Sobic010G248000 Sobic003G327600 Sobic003G327600 Sobic002G270800--Sobic003G327600 Sobic004G049200 Sobic004G049200 Sobic002G270800--Sobic004G049200 Sobic003G252500 Sobic003G252500 Sobic002G270800--Sobic003G252500 Sobic004G312100--Sobic006G180700 Sobic001G088900 Sobic001G088900 Sobic004G312100--Sobic001G088900 Sobic001G334100 Sobic001G334100 Sobic004G312100--Sobic001G334100 Sobic003G360300 Sobic003G360300 Sobic004G312100--Sobic003G360300 Sobic006G091000 Sobic006G091000 Sobic004G312100--Sobic006G091000 Sobic004G312100--Sobic001G034500 Sobic006G268300 Sobic006G268300 Sobic004G312100--Sobic006G268300 Sobic003G259600 Sobic003G259600 Sobic004G312100--Sobic003G259600 Sobic004G312100--Sobic001G413800 Sobic009G002000 Sobic009G002000 Sobic005G084900--Sobic009G002000 Sobic009G030400 Sobic009G030400 Sobic005G084900--Sobic009G030400 Sobic006G164000 Sobic006G164000 Sobic005G084900--Sobic006G164000 Sobic002G280900 Sobic002G280900 Sobic005G084900--Sobic002G280900 Sobic001G067000 Sobic001G067000 Sobic005G084900--Sobic001G067000 Sobic001G294600 Sobic001G294600 Sobic005G084900--Sobic001G294600 Sobic010G059700 Sobic010G059700 Sobic005G084900--Sobic010G059700 Sobic004G145600 Sobic004G145600 Sobic005G084900--Sobic004G145600 Sobic010G141600 Sobic010G141600 Sobic005G084900--Sobic010G141600 Sobic006G131000 Sobic006G131000 Sobic001G477700--Sobic006G131000 Sobic001G096000 Sobic001G096000 Sobic001G477700--Sobic001G096000 Sobic001G477700--Sobic007G042900 Sobic001G477700--Sobic001G034500 Sobic007G196900 Sobic007G196900 Sobic001G477700--Sobic007G196900 Sobic007G180600 Sobic007G180600 Sobic001G477700--Sobic007G180600 Sobic001G477700--Sobic001G413800 Sobic003G284000 Sobic003G284000 Sobic001G477700--Sobic003G284000 Sobic001G477700--Sobic010G204400 Sobic002G182150 Sobic002G182150 Sobic002G107532--Sobic002G182150 Sobic007G100100 Sobic007G100100 Sobic002G107532--Sobic007G100100 Sobic008G099500 Sobic008G099500 Sobic002G107532--Sobic008G099500 Sobic005G040900 Sobic005G040900 Sobic002G107532--Sobic005G040900 Sobic008G090300 Sobic008G090300 Sobic002G107532--Sobic008G090300 Sobic002G146900 Sobic002G146900 Sobic002G107532--Sobic002G146900 Sobic004G178901 Sobic004G178901 Sobic002G107532--Sobic004G178901 Sobic002G073300 Sobic002G073300 Sobic002G107532--Sobic002G073300 Sobic010G139301 Sobic010G139301 Sobic002G107532--Sobic010G139301 Sobic006G251600 Sobic006G251600 Sobic006G225800--Sobic006G251600 Sobic004G305100 Sobic004G305100 Sobic006G225800--Sobic004G305100 Sobic004G287100 Sobic004G287100 Sobic006G225800--Sobic004G287100 Sobic002G262100 Sobic002G262100 Sobic006G225800--Sobic002G262100 Sobic002G365400 Sobic002G365400 Sobic006G225800--Sobic002G365400 Sobic003G098900 Sobic003G098900 Sobic006G225800--Sobic003G098900 Sobic010G041000 Sobic010G041000 Sobic006G225800--Sobic010G041000 Sobic006G225800--Sobic002G146900 Sobic004G173100 Sobic004G173100 Sobic006G225800--Sobic004G173100 Sobic004G204400 Sobic004G204400 Sobic002G244700--Sobic004G204400 Sobic001G523100 Sobic001G523100 Sobic002G244700--Sobic001G523100 Sobic004G180500 Sobic004G180500 Sobic002G244700--Sobic004G180500 Sobic009G121750 Sobic009G121750 Sobic002G244700--Sobic009G121750 Sobic002G431200 Sobic002G431200 Sobic002G244700--Sobic002G431200 Sobic004G332000 Sobic004G332000 Sobic002G244700--Sobic004G332000 Sobic002G105000 Sobic002G105000 Sobic002G244700--Sobic002G105000 Sobic002G244700--Sobic001G119700 Sobic008G012700 Sobic008G012700 Sobic002G244700--Sobic008G012700
Octagon: transcription factors


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