Gene annotation
Transcriptome id Sobic.007G111500.1,Sobic.007G111500.2
Synonym NDF1, Sb07g016320, NDH48
Functional annotation expressed protein
UniProt A0A1B6PH60 , C6JRK3 , A0A1B6PHD0 , A0A109NDV8
Pfam -
Panther DB PTHR37698 PTHR37698:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15980 : NDH-dependent cyclic electron flow 1
RAP-DB (Rice) LOC_Os08g17390.1 : expressed protein
MaizeGDB (Corn) Zm00025a054648 , Zm00025a030648
Brachypodium KQJ95893
Barley HORVU4Hr1G014010.4 , HORVU4Hr1G014010.5 , HORVU4Hr1G014010.6 , HORVU4Hr1G014010.7 , HORVU4Hr1G014010.1 , HORVU4Hr1G014010.2 , HORVU4Hr1G014010.3 , HORVU4Hr1G014010.8 , HORVU4Hr1G014010.9
Wheat TraesCS4A02G232300 , TraesCS4B02G083600 , TraesCS4D02G081600
Populus -


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cDNA sequences
Sobic.007G111500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G430100 omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
2 Sobic.002G036300 expressed protein -
3 Sobic.003G347520 - -
4 Sobic.003G365200 expressed protein -
5 Sobic.006G074500 protein of unknown function DUF1279 domain containing protein, expressed -
6 Sobic.006G109000 integral membrane protein, putative, expressed -
7 Sobic.006G101600 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
8 Sobic.003G050800 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed K15283: solute carrier family 35, member E1
9 Sobic.001G460900 expressed protein -
10 Sobic.003G133700 transporter, major facilitator family, putative, expressed K08193: MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other
11 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
12 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.001G090700 expressed protein -
14 Sobic.001G454600 expressed protein -
15 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
16 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
17 Sobic.001G370800 - -
18 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
19 Sobic.002G234800 expressed protein -
20 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G111500 Sobic007G111500 Sobic002G430100 Sobic002G430100 Sobic007G111500--Sobic002G430100 Sobic002G036300 Sobic002G036300 Sobic007G111500--Sobic002G036300 Sobic003G347520 Sobic003G347520 Sobic007G111500--Sobic003G347520 Sobic003G365200 Sobic003G365200 Sobic007G111500--Sobic003G365200 Sobic006G074500 Sobic006G074500 Sobic007G111500--Sobic006G074500 Sobic006G109000 Sobic006G109000 Sobic007G111500--Sobic006G109000 Sobic006G101600 Sobic006G101600 Sobic007G111500--Sobic006G101600 Sobic003G050800 Sobic003G050800 Sobic007G111500--Sobic003G050800 Sobic001G460900 Sobic001G460900 Sobic007G111500--Sobic001G460900 Sobic003G225200 Sobic003G225200 Sobic002G430100--Sobic003G225200 Sobic002G430100--Sobic003G365200 Sobic010G000200 Sobic010G000200 Sobic002G430100--Sobic010G000200 Sobic002G430100--Sobic007G111500 Sobic001G212900 Sobic001G212900 Sobic002G430100--Sobic001G212900 Sobic001G424650 Sobic001G424650 Sobic002G430100--Sobic001G424650 Sobic004G173200 Sobic004G173200 Sobic002G430100--Sobic004G173200 Sobic001G442000 Sobic001G442000 Sobic002G430100--Sobic001G442000 Sobic001G492400 Sobic001G492400 Sobic002G430100--Sobic001G492400 Sobic001G228500 Sobic001G228500 Sobic002G036300--Sobic001G228500 Sobic009G183650 Sobic009G183650 Sobic002G036300--Sobic009G183650 Sobic002G036300--Sobic006G109000 Sobic005G110553 Sobic005G110553 Sobic002G036300--Sobic005G110553 Sobic002G036300--Sobic003G050800 Sobic010G187950 Sobic010G187950 Sobic002G036300--Sobic010G187950 Sobic002G234800 Sobic002G234800 Sobic002G036300--Sobic002G234800 Sobic004G221100 Sobic004G221100 Sobic002G036300--Sobic004G221100 Sobic009G079700 Sobic009G079700 Sobic002G036300--Sobic009G079700 Sobic003G347520--Sobic003G050800 Sobic003G347520--Sobic003G225200 Sobic008G192900 Sobic008G192900 Sobic003G347520--Sobic008G192900 Sobic003G347520--Sobic003G365200 Sobic003G347520--Sobic010G000200 Sobic002G001500 Sobic002G001500 Sobic003G347520--Sobic002G001500 Sobic003G347520--Sobic006G109000 Sobic003G262600 Sobic003G262600 Sobic003G347520--Sobic003G262600 Sobic003G347520--Sobic002G430100 Sobic003G253700 Sobic003G253700 Sobic003G365200--Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic003G365200--Sobic003G155000 Sobic001G520000 Sobic001G520000 Sobic003G365200--Sobic001G520000 Sobic006G134300 Sobic006G134300 Sobic003G365200--Sobic006G134300 Sobic010G012200 Sobic010G012200 Sobic003G365200--Sobic010G012200 Sobic003G365200--Sobic003G262600 Sobic003G155800 Sobic003G155800 Sobic003G365200--Sobic003G155800 Sobic004G227700 Sobic004G227700 Sobic003G365200--Sobic004G227700 Sobic006G249600 Sobic006G249600 Sobic003G365200--Sobic006G249600 Sobic002G377400 Sobic002G377400 Sobic006G074500--Sobic002G377400 Sobic003G440500 Sobic003G440500 Sobic006G074500--Sobic003G440500 Sobic003G133700 Sobic003G133700 Sobic006G074500--Sobic003G133700 Sobic006G074500--Sobic003G050800 Sobic002G398600 Sobic002G398600 Sobic006G074500--Sobic002G398600 Sobic009G223900 Sobic009G223900 Sobic006G074500--Sobic009G223900 Sobic002G187900 Sobic002G187900 Sobic006G074500--Sobic002G187900 Sobic010G249600 Sobic010G249600 Sobic006G074500--Sobic010G249600 Sobic006G074500--Sobic003G365200 Sobic006G109000--Sobic002G234800 Sobic006G109000--Sobic009G183650 Sobic006G109000--Sobic008G192900 Sobic008G103400 Sobic008G103400 Sobic006G109000--Sobic008G103400 Sobic004G181000 Sobic004G181000 Sobic006G109000--Sobic004G181000 Sobic006G109000--Sobic002G398600 Sobic003G362800 Sobic003G362800 Sobic006G109000--Sobic003G362800 Sobic006G109000--Sobic001G424650 Sobic006G109000--Sobic002G001500 Sobic003G137200 Sobic003G137200 Sobic006G101600--Sobic003G137200 Sobic006G101600--Sobic003G133700 Sobic006G101600--Sobic003G347520 Sobic006G101600--Sobic003G365200 Sobic006G101600--Sobic008G192900 Sobic001G010900 Sobic001G010900 Sobic006G101600--Sobic001G010900 Sobic006G101600--Sobic006G074500 Sobic006G101600--Sobic003G050800 Sobic003G001650 Sobic003G001650 Sobic006G101600--Sobic003G001650 Sobic001G367900 Sobic001G367900 Sobic003G050800--Sobic001G367900 Sobic003G149400 Sobic003G149400 Sobic003G050800--Sobic003G149400 Sobic008G065700 Sobic008G065700 Sobic003G050800--Sobic008G065700 Sobic007G010400 Sobic007G010400 Sobic003G050800--Sobic007G010400 Sobic007G077466 Sobic007G077466 Sobic003G050800--Sobic007G077466 Sobic004G224000 Sobic004G224000 Sobic003G050800--Sobic004G224000 Sobic007G226000 Sobic007G226000 Sobic003G050800--Sobic007G226000 Sobic003G050800--Sobic002G234800 Sobic003G050800--Sobic003G133700 Sobic009G026600 Sobic009G026600 Sobic001G460900--Sobic009G026600 Sobic009G074800 Sobic009G074800 Sobic001G460900--Sobic009G074800 Sobic008G190600 Sobic008G190600 Sobic001G460900--Sobic008G190600 Sobic008G170800 Sobic008G170800 Sobic001G460900--Sobic008G170800 Sobic005G027350 Sobic005G027350 Sobic001G460900--Sobic005G027350 Sobic001G090700 Sobic001G090700 Sobic001G460900--Sobic001G090700 Sobic002G309300 Sobic002G309300 Sobic001G460900--Sobic002G309300 Sobic001G038700 Sobic001G038700 Sobic001G460900--Sobic001G038700 Sobic009G186300 Sobic009G186300 Sobic001G460900--Sobic009G186300
Octagon: transcription factors


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