Gene annotation
Transcriptome id Sobic.007G134100.1
Synonym Sb07g021000
Functional annotation expressed protein
UniProt C5YL53
Pfam PF14159
Panther DB PTHR33222 PTHR33222:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01150 : -
RAP-DB (Rice) LOC_Os08g33380.1 : expressed protein
MaizeGDB (Corn) Zm00025a005980
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G270600 PSF1 - Putative GINS complex subunit, expressed K10732: GINS1, GINS complex subunit 1
2 Sobic.006G233000 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
3 Sobic.002G356600 ZCW7, putative, expressed -
4 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
5 Sobic.001G259000 initiation factor 2 subunit family domain containing protein, expressed K03754: translation initiation factor eIF-2B subunit beta
6 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -
7 Sobic.006G252100 mediator of RNA polymerase II transcription subunit 7, putative, expressed K15148: mediator of RNA polymerase II transcription subunit 7
8 Sobic.004G266900 AAA-type ATPase family protein, putative, expressed K17681: ATPase family AAA domain-containing protein 3A/B
9 Sobic.006G010000 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
10 Sobic.010G247400 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
11 Sobic.004G155600 dnaJ domain containing protein, expressed -
12 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
13 Sobic.004G156800 RNA pseudouridine synthase, putative, expressed -
14 Sobic.001G249700 expressed protein K11877: PSMG3, proteasome assembly chaperone 3
15 Sobic.002G394800 SWIB/MDM2 domain containing protein, expressed K11650: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
16 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
17 Sobic.006G271700 L-asparaginase precursor protein, putative, expressed K08657: taspase, threonine aspartase, 1
18 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
19 Sobic.006G272200 cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
20 Sobic.001G085800 WD domain, G-beta repeat domain containing protein, expressed K14406: cleavage stimulation factor subunit 1


Gene co-expression network
sample Sobic007G134100 Sobic007G134100 Sobic006G270600 Sobic006G270600 Sobic007G134100--Sobic006G270600 Sobic006G233000 Sobic006G233000 Sobic007G134100--Sobic006G233000 Sobic002G356600 Sobic002G356600 Sobic007G134100--Sobic002G356600 Sobic002G394600 Sobic002G394600 Sobic007G134100--Sobic002G394600 Sobic001G259000 Sobic001G259000 Sobic007G134100--Sobic001G259000 Sobic010G264000 Sobic010G264000 Sobic007G134100--Sobic010G264000 Sobic006G252100 Sobic006G252100 Sobic007G134100--Sobic006G252100 Sobic004G266900 Sobic004G266900 Sobic007G134100--Sobic004G266900 Sobic006G010000 Sobic006G010000 Sobic007G134100--Sobic006G010000 Sobic004G155600 Sobic004G155600 Sobic006G270600--Sobic004G155600 Sobic003G132000 Sobic003G132000 Sobic006G270600--Sobic003G132000 Sobic006G270600--Sobic001G259000 Sobic006G270600--Sobic010G264000 Sobic002G295500 Sobic002G295500 Sobic006G270600--Sobic002G295500 Sobic009G131900 Sobic009G131900 Sobic006G270600--Sobic009G131900 Sobic006G014100 Sobic006G014100 Sobic006G270600--Sobic006G014100 Sobic001G492200 Sobic001G492200 Sobic006G270600--Sobic001G492200 Sobic001G114500 Sobic001G114500 Sobic006G270600--Sobic001G114500 Sobic006G233000--Sobic006G010000 Sobic010G085200 Sobic010G085200 Sobic006G233000--Sobic010G085200 Sobic006G233300 Sobic006G233300 Sobic006G233000--Sobic006G233300 Sobic006G233000--Sobic004G155600 Sobic006G233000--Sobic001G259000 Sobic002G394800 Sobic002G394800 Sobic006G233000--Sobic002G394800 Sobic003G439800 Sobic003G439800 Sobic006G233000--Sobic003G439800 Sobic006G233000--Sobic006G270600 Sobic006G233000--Sobic007G134100 Sobic002G356600--Sobic007G134100 Sobic004G354000 Sobic004G354000 Sobic002G356600--Sobic004G354000 Sobic003G209400 Sobic003G209400 Sobic002G356600--Sobic003G209400 Sobic006G271700 Sobic006G271700 Sobic002G356600--Sobic006G271700 Sobic002G309200 Sobic002G309200 Sobic002G356600--Sobic002G309200 Sobic004G034700 Sobic004G034700 Sobic002G356600--Sobic004G034700 Sobic002G412700 Sobic002G412700 Sobic002G356600--Sobic002G412700 Sobic008G017100 Sobic008G017100 Sobic002G356600--Sobic008G017100 Sobic009G151800 Sobic009G151800 Sobic002G356600--Sobic009G151800 Sobic002G341800 Sobic002G341800 Sobic002G394600--Sobic002G341800 Sobic006G044600 Sobic006G044600 Sobic002G394600--Sobic006G044600 Sobic002G014400 Sobic002G014400 Sobic002G394600--Sobic002G014400 Sobic001G251600 Sobic001G251600 Sobic002G394600--Sobic001G251600 Sobic009G190300 Sobic009G190300 Sobic002G394600--Sobic009G190300 Sobic004G194900 Sobic004G194900 Sobic002G394600--Sobic004G194900 Sobic001G404100 Sobic001G404100 Sobic002G394600--Sobic001G404100 Sobic007G177300 Sobic007G177300 Sobic002G394600--Sobic007G177300 Sobic004G310500 Sobic004G310500 Sobic002G394600--Sobic004G310500 Sobic009G143800 Sobic009G143800 Sobic001G259000--Sobic009G143800 Sobic004G156800 Sobic004G156800 Sobic001G259000--Sobic004G156800 Sobic001G259000--Sobic006G270600 Sobic009G101200 Sobic009G101200 Sobic001G259000--Sobic009G101200 Sobic001G145400 Sobic001G145400 Sobic001G259000--Sobic001G145400 Sobic008G160000 Sobic008G160000 Sobic001G259000--Sobic008G160000 Sobic007G039400 Sobic007G039400 Sobic001G259000--Sobic007G039400 Sobic004G340400 Sobic004G340400 Sobic001G259000--Sobic004G340400 Sobic009G138700 Sobic009G138700 Sobic001G259000--Sobic009G138700 Sobic010G264000--Sobic006G270600 Sobic008G129600 Sobic008G129600 Sobic010G264000--Sobic008G129600 Sobic008G103300 Sobic008G103300 Sobic010G264000--Sobic008G103300 Sobic001G042200 Sobic001G042200 Sobic010G264000--Sobic001G042200 Sobic010G235200 Sobic010G235200 Sobic010G264000--Sobic010G235200 Sobic003G363700 Sobic003G363700 Sobic010G264000--Sobic003G363700 Sobic003G182300 Sobic003G182300 Sobic010G264000--Sobic003G182300 Sobic010G264000--Sobic001G492200 Sobic006G142400 Sobic006G142400 Sobic010G264000--Sobic006G142400 Sobic002G268400 Sobic002G268400 Sobic006G252100--Sobic002G268400 Sobic001G152000 Sobic001G152000 Sobic006G252100--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic006G252100--Sobic009G033900 Sobic006G216000 Sobic006G216000 Sobic006G252100--Sobic006G216000 Sobic003G220700 Sobic003G220700 Sobic006G252100--Sobic003G220700 Sobic006G094600 Sobic006G094600 Sobic006G252100--Sobic006G094600 Sobic001G226100 Sobic001G226100 Sobic006G252100--Sobic001G226100 Sobic004G074300 Sobic004G074300 Sobic006G252100--Sobic004G074300 Sobic001G370300 Sobic001G370300 Sobic006G252100--Sobic001G370300 Sobic004G266900--Sobic006G014100 Sobic001G395100 Sobic001G395100 Sobic004G266900--Sobic001G395100 Sobic009G095100 Sobic009G095100 Sobic004G266900--Sobic009G095100 Sobic006G240100 Sobic006G240100 Sobic004G266900--Sobic006G240100 Sobic004G266900--Sobic004G155600 Sobic006G121300 Sobic006G121300 Sobic004G266900--Sobic006G121300 Sobic007G091600 Sobic007G091600 Sobic004G266900--Sobic007G091600 Sobic007G071200 Sobic007G071200 Sobic004G266900--Sobic007G071200 Sobic007G075900 Sobic007G075900 Sobic004G266900--Sobic007G075900 Sobic006G010000--Sobic006G233300 Sobic006G010000--Sobic006G233000 Sobic008G153500 Sobic008G153500 Sobic006G010000--Sobic008G153500 Sobic003G293300 Sobic003G293300 Sobic006G010000--Sobic003G293300 Sobic010G186600 Sobic010G186600 Sobic006G010000--Sobic010G186600 Sobic006G010000--Sobic001G114500 Sobic006G010000--Sobic001G259000 Sobic001G234200 Sobic001G234200 Sobic006G010000--Sobic001G234200 Sobic002G071000 Sobic002G071000 Sobic006G010000--Sobic002G071000
Octagon: transcription factors


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