Gene annotation
Transcriptome id Sobic.007G183400.1
Synonym
Functional annotation CC-NBS-LRR, putative, expressed
UniProt A0A1Z5RBE2
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF613
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os08g43000.1 : CC-NBS-LRR, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ99235 , PNT68528
Barley -
Wheat TraesCS7D02G017600 , TraesCS7D02G123000 , TraesCS7A02G001100 , TraesCS4A02G471200 , TraesCS7D02G122700 , TraesCS7B02G024900 , TraesCS7B02G452000 , TraesCS3B02G497800 , TraesCS5D02G398100 , TraesCS7D02G018200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G085300 phytosulfokine receptor precursor, putative, expressed -
2 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
3 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.010G001500 AML1, putative, expressed -
5 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
6 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
7 Sobic.004G355000 SAC9, putative, expressed -
8 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
9 Sobic.004G065000 expressed protein -
10 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
11 Sobic.001G079200 STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.007G075400 expressed protein -
13 Sobic.001G291000 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
16 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
17 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
18 Sobic.009G249200 transmembrane protein, putative, expressed -
19 Sobic.003G322700 expressed protein -
20 Sobic.001G050200 expressed protein -


Gene co-expression network
sample Sobic007G183400 Sobic007G183400 Sobic001G085300 Sobic001G085300 Sobic007G183400--Sobic001G085300 Sobic001G390800 Sobic001G390800 Sobic007G183400--Sobic001G390800 Sobic001G178700 Sobic001G178700 Sobic007G183400--Sobic001G178700 Sobic010G001500 Sobic010G001500 Sobic007G183400--Sobic010G001500 Sobic002G430000 Sobic002G430000 Sobic007G183400--Sobic002G430000 Sobic007G004500 Sobic007G004500 Sobic007G183400--Sobic007G004500 Sobic004G355000 Sobic004G355000 Sobic007G183400--Sobic004G355000 Sobic004G113400 Sobic004G113400 Sobic007G183400--Sobic004G113400 Sobic004G065000 Sobic004G065000 Sobic007G183400--Sobic004G065000 Sobic001G085300--Sobic001G390800 Sobic003G313500 Sobic003G313500 Sobic001G085300--Sobic003G313500 Sobic001G117200 Sobic001G117200 Sobic001G085300--Sobic001G117200 Sobic003G110000 Sobic003G110000 Sobic001G085300--Sobic003G110000 Sobic003G422500 Sobic003G422500 Sobic001G085300--Sobic003G422500 Sobic001G415300 Sobic001G415300 Sobic001G085300--Sobic001G415300 Sobic010G139600 Sobic010G139600 Sobic001G085300--Sobic010G139600 Sobic003G196300 Sobic003G196300 Sobic001G085300--Sobic003G196300 Sobic001G268200 Sobic001G268200 Sobic001G085300--Sobic001G268200 Sobic001G390800--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic001G390800--Sobic001G121200 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G390800--Sobic001G085300 Sobic010G147100 Sobic010G147100 Sobic001G390800--Sobic010G147100 Sobic007G075400 Sobic007G075400 Sobic001G390800--Sobic007G075400 Sobic001G390800--Sobic010G139600 Sobic001G050200 Sobic001G050200 Sobic001G390800--Sobic001G050200 Sobic001G178700--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic001G178700--Sobic009G010600 Sobic001G248300 Sobic001G248300 Sobic001G178700--Sobic001G248300 Sobic001G291000 Sobic001G291000 Sobic001G178700--Sobic001G291000 Sobic001G474600 Sobic001G474600 Sobic001G178700--Sobic001G474600 Sobic001G146800 Sobic001G146800 Sobic001G178700--Sobic001G146800 Sobic010G112000 Sobic010G112000 Sobic001G178700--Sobic010G112000 Sobic007G172400 Sobic007G172400 Sobic001G178700--Sobic007G172400 Sobic004G329400 Sobic004G329400 Sobic001G178700--Sobic004G329400 Sobic003G322700 Sobic003G322700 Sobic010G001500--Sobic003G322700 Sobic007G024700 Sobic007G024700 Sobic010G001500--Sobic007G024700 Sobic010G001500--Sobic004G355000 Sobic006G204900 Sobic006G204900 Sobic010G001500--Sobic006G204900 Sobic010G224000 Sobic010G224000 Sobic010G001500--Sobic010G224000 Sobic002G419800 Sobic002G419800 Sobic010G001500--Sobic002G419800 Sobic001G207400 Sobic001G207400 Sobic010G001500--Sobic001G207400 Sobic010G001500--Sobic001G178700 Sobic010G001500--Sobic001G146800 Sobic002G430000--Sobic001G207400 Sobic002G430000--Sobic001G117200 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic002G430000--Sobic004G113400 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic002G430000--Sobic003G110000 Sobic002G266000 Sobic002G266000 Sobic007G004500--Sobic002G266000 Sobic007G004500--Sobic002G430000 Sobic007G004500--Sobic001G085300 Sobic007G004500--Sobic001G390800 Sobic007G004500--Sobic001G016700 Sobic007G004500--Sobic003G322700 Sobic007G004500--Sobic010G139600 Sobic007G004500--Sobic004G065000 Sobic009G133500 Sobic009G133500 Sobic007G004500--Sobic009G133500 Sobic004G355000--Sobic001G207400 Sobic004G355000--Sobic002G430000 Sobic004G355000--Sobic001G248300 Sobic005G001000 Sobic005G001000 Sobic004G355000--Sobic005G001000 Sobic004G355000--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic004G355000--Sobic005G157000 Sobic004G355000--Sobic003G322700 Sobic004G355000--Sobic004G113400 Sobic004G355000--Sobic009G010600 Sobic004G113400--Sobic009G010600 Sobic003G408600 Sobic003G408600 Sobic004G113400--Sobic003G408600 Sobic004G113400--Sobic004G329400 Sobic001G058700 Sobic001G058700 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic004G113400--Sobic001G178700 Sobic004G113400--Sobic001G117200 Sobic001G534800 Sobic001G534800 Sobic004G113400--Sobic001G534800 Sobic004G113400--Sobic002G430000 Sobic004G065000--Sobic007G075400 Sobic004G331100 Sobic004G331100 Sobic004G065000--Sobic004G331100 Sobic004G065000--Sobic009G133500 Sobic007G163100 Sobic007G163100 Sobic004G065000--Sobic007G163100 Sobic007G133700 Sobic007G133700 Sobic004G065000--Sobic007G133700 Sobic004G065000--Sobic010G139600 Sobic001G313700 Sobic001G313700 Sobic004G065000--Sobic001G313700 Sobic001G273700 Sobic001G273700 Sobic004G065000--Sobic001G273700 Sobic004G065000--Sobic001G085300
Octagon: transcription factors


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