Gene annotation
Transcriptome id Sobic.008G003200.1,Sobic.008G003200.2
Synonym Sb08g000460, FAD8
Functional annotation Fatty acid desaturase 8 (omega-3 fatty acid desaturase) FAD8 (Os) (PubMedID : 27208977)
fatty acid desaturase, putative, expressed
UniProt A0A1Z5R478 , C5YQ12
Pfam PF11960 PF00487
Panther DB PTHR32100 PTHR32100:SF14
NCBI CDD -
KEGG Orthology K10257; FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
Gene Ontology GO:0016717; oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT5G05580 : fatty acid desaturase 8
RAP-DB (Rice) LOC_Os12g01370.1 : fatty acid desaturase, putative, expressed
MaizeGDB (Corn) Zm00025a052679 , Zm00025a001974 , Zm00025a028922 , Zm00025a015517
Brachypodium KQJ92651
Barley HORVU4Hr1G024960.3 , HORVU4Hr1G024960.2 , HORVU4Hr1G024960.1 , HORVU3Hr1G026670.8 , HORVU3Hr1G026670.9 , HORVU3Hr1G026670.6 , HORVU3Hr1G026670.7 , HORVU3Hr1G026670.4 , HORVU3Hr1G026670.5 , HORVU3Hr1G026670.2 , HORVU3Hr1G026670.3 , HORVU3Hr1G026670.1 , HORVU5Hr1G048240.5 , HORVU5Hr1G048240.4 , HORVU5Hr1G048240.7 , HORVU5Hr1G048240.9 , HORVU5Hr1G048240.8 , HORVU3Hr1G026670.14 , HORVU3Hr1G026670.15 , HORVU3Hr1G026670.16 , HORVU3Hr1G026670.17 , HORVU3Hr1G026670.10 , HORVU3Hr1G026670.11 , HORVU3Hr1G026670.12 , HORVU3Hr1G026670.13 , HORVU5Hr1G048240.1
Wheat TraesCS2D02G082700 , TraesCS5B02G153000 , TraesCS5A02G154800 , TraesCS4D02G130700 , TraesCS4A02G182700 , TraesCS2B02G099500 , TraesCS4B02G135900 , TraesCS5D02G159700 , TraesCS2A02G084800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G357600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
2 Sobic.008G015600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
3 Sobic.005G139225 - -
4 Sobic.004G227550 - -
5 Sobic.004G227550 - -
6 Sobic.007G104600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
7 Sobic.K030700 - -
8 Sobic.003G280500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@elongation factor, putative, expressed K03234: elongation factor 2
9 Sobic.002G265300 acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed K17361: acyl-coenzyme A thioesterase 9
10 Sobic.010G020700 expressed protein -
11 Sobic.007G094050 - -
12 Sobic.005G225200 expressed protein -
13 Sobic.007G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.007G003500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
16 Sobic.001G162700 "phosphatidylinositol phosphatase, up-regulated under severe drought stress"(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed K01106: inositol-1,4,5-trisphosphate 5-phosphatase
17 Sobic.004G198800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@expressed protein K01113: alkaline phosphatase D
18 Sobic.003G430900 expressed protein -
19 Sobic.007G010300 OsFBL26 - F-box domain and LRR containing protein, expressed -
20 Sobic.002G266200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic008G003200 Sobic008G003200 Sobic001G357600 Sobic001G357600 Sobic008G003200--Sobic001G357600 Sobic008G015600 Sobic008G015600 Sobic008G003200--Sobic008G015600 Sobic005G139225 Sobic005G139225 Sobic008G003200--Sobic005G139225 Sobic004G227550 Sobic004G227550 Sobic008G003200--Sobic004G227550 Sobic007G104600 Sobic007G104600 Sobic008G003200--Sobic007G104600 SobicK030700 SobicK030700 Sobic008G003200--SobicK030700 Sobic003G280500 Sobic003G280500 Sobic008G003200--Sobic003G280500 Sobic002G265300 Sobic002G265300 Sobic008G003200--Sobic002G265300 Sobic001G357600--Sobic008G003200 Sobic001G357600--Sobic004G227550 Sobic003G029000 Sobic003G029000 Sobic001G357600--Sobic003G029000 Sobic001G328650 Sobic001G328650 Sobic001G357600--Sobic001G328650 Sobic002G286150 Sobic002G286150 Sobic001G357600--Sobic002G286150 Sobic001G287000 Sobic001G287000 Sobic001G357600--Sobic001G287000 Sobic009G107600 Sobic009G107600 Sobic001G357600--Sobic009G107600 Sobic008G179200 Sobic008G179200 Sobic001G357600--Sobic008G179200 Sobic008G015600--Sobic007G104600 Sobic008G015600--Sobic002G265300 Sobic010G182500 Sobic010G182500 Sobic008G015600--Sobic010G182500 Sobic002G266200 Sobic002G266200 Sobic008G015600--Sobic002G266200 Sobic006G030700 Sobic006G030700 Sobic008G015600--Sobic006G030700 Sobic001G280200 Sobic001G280200 Sobic008G015600--Sobic001G280200 Sobic008G153400 Sobic008G153400 Sobic008G015600--Sobic008G153400 Sobic001G162700 Sobic001G162700 Sobic008G015600--Sobic001G162700 Sobic002G409500 Sobic002G409500 Sobic008G015600--Sobic002G409500 Sobic007G093000 Sobic007G093000 Sobic005G139225--Sobic007G093000 Sobic005G139225--Sobic001G162700 Sobic007G092900 Sobic007G092900 Sobic005G139225--Sobic007G092900 Sobic005G139225--Sobic002G409500 Sobic005G139225--SobicK030700 Sobic006G214200 Sobic006G214200 Sobic005G139225--Sobic006G214200 Sobic007G094050 Sobic007G094050 Sobic005G139225--Sobic007G094050 Sobic005G139225--Sobic006G030700 Sobic005G139225--Sobic001G280200 Sobic004G227550--Sobic004G227550 Sobic008G053900 Sobic008G053900 Sobic004G227550--Sobic008G053900 Sobic006G225700 Sobic006G225700 Sobic004G227550--Sobic006G225700 Sobic004G227550--Sobic009G107600 Sobic009G152180 Sobic009G152180 Sobic004G227550--Sobic009G152180 Sobic007G201600 Sobic007G201600 Sobic004G227550--Sobic007G201600 Sobic004G227550--Sobic007G094050 Sobic002G084600 Sobic002G084600 Sobic004G227550--Sobic002G084600 Sobic009G058200 Sobic009G058200 Sobic004G227550--Sobic009G058200 Sobic007G104600--Sobic008G015600 Sobic010G270200 Sobic010G270200 Sobic007G104600--Sobic010G270200 Sobic004G051500 Sobic004G051500 Sobic007G104600--Sobic004G051500 Sobic006G132600 Sobic006G132600 Sobic007G104600--Sobic006G132600 Sobic001G434650 Sobic001G434650 Sobic007G104600--Sobic001G434650 Sobic006G077700 Sobic006G077700 Sobic007G104600--Sobic006G077700 Sobic006G166400 Sobic006G166400 Sobic007G104600--Sobic006G166400 Sobic002G381800 Sobic002G381800 Sobic007G104600--Sobic002G381800 Sobic004G198800 Sobic004G198800 Sobic007G104600--Sobic004G198800 Sobic010G098100 Sobic010G098100 SobicK030700--Sobic010G098100 SobicK030700--Sobic001G280200 Sobic009G114000 Sobic009G114000 SobicK030700--Sobic009G114000 SobicK030700--Sobic001G162700 SobicK030700--Sobic006G030700 Sobic007G187300 Sobic007G187300 SobicK030700--Sobic007G187300 Sobic001G249300 Sobic001G249300 SobicK030700--Sobic001G249300 SobicK030700--Sobic006G214200 Sobic001G212000 Sobic001G212000 SobicK030700--Sobic001G212000 Sobic006G259401 Sobic006G259401 Sobic003G280500--Sobic006G259401 Sobic001G220900 Sobic001G220900 Sobic003G280500--Sobic001G220900 Sobic001G282700 Sobic001G282700 Sobic003G280500--Sobic001G282700 Sobic001G000400 Sobic001G000400 Sobic003G280500--Sobic001G000400 Sobic006G244400 Sobic006G244400 Sobic003G280500--Sobic006G244400 Sobic008G113600 Sobic008G113600 Sobic003G280500--Sobic008G113600 Sobic005G139400 Sobic005G139400 Sobic003G280500--Sobic005G139400 Sobic005G152200 Sobic005G152200 Sobic003G280500--Sobic005G152200 Sobic002G306700 Sobic002G306700 Sobic003G280500--Sobic002G306700 Sobic003G377000 Sobic003G377000 Sobic002G265300--Sobic003G377000 Sobic002G007800 Sobic002G007800 Sobic002G265300--Sobic002G007800 Sobic004G096700 Sobic004G096700 Sobic002G265300--Sobic004G096700 Sobic002G431000 Sobic002G431000 Sobic002G265300--Sobic002G431000 Sobic002G426300 Sobic002G426300 Sobic002G265300--Sobic002G426300 Sobic010G171000 Sobic010G171000 Sobic002G265300--Sobic010G171000 Sobic009G241000 Sobic009G241000 Sobic002G265300--Sobic009G241000 Sobic010G184300 Sobic010G184300 Sobic002G265300--Sobic010G184300 Sobic009G025200 Sobic009G025200 Sobic002G265300--Sobic009G025200
Octagon: transcription factors


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