Gene annotation
Transcriptome id Sobic.008G018400.1
Synonym Sb08g001595
Functional annotation VQ domain containing protein, putative, expressed
UniProt A0A1B6PBP1
Pfam PF05678
Panther DB PTHR33179 PTHR33179:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41010 : calmodulin (CAM)-binding protein of 25 kDa
RAP-DB (Rice) LOC_Os03g20440.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a053721
Brachypodium -
Barley HORVU0Hr1G010810.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G364500 receptor-like protein kinase, putative, expressed -
2 Sobic.010G045700 "SbWRKY30 enhances the drought tolerance of plants and regulates a drought stress-responsive gene, SbRD19, in sorghum"(PubMedID : 32112957)@WRKY113, expressed -
3 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
4 Sobic.003G234000 DUF1645 domain containing protein, putative, expressed -
5 Sobic.009G197600 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase family protein("PubMedID : 26759170,PubMedID : 24597475")@O-methyltransferase, putative, expressed -
6 Sobic.001G461000 keratin, type I cytoskeletal 9, putative, expressed -
7 Sobic.001G489600 expressed protein -
8 Sobic.006G075500 VQ domain containing protein, putative, expressed -
9 Sobic.004G311500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR12 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
10 Sobic.005G186200 patatin, putative, expressed -
11 Sobic.007G057100 expressed protein -
12 Sobic.002G214800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
13 Sobic.009G141201 - -
14 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
15 Sobic.004G332500 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
17 Sobic.003G111500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
18 Sobic.003G186500 N-rich protein, putative, expressed -
19 Sobic.002G202100 expressed protein -
20 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G018400 Sobic008G018400 Sobic003G364500 Sobic003G364500 Sobic008G018400--Sobic003G364500 Sobic010G045700 Sobic010G045700 Sobic008G018400--Sobic010G045700 Sobic001G051600 Sobic001G051600 Sobic008G018400--Sobic001G051600 Sobic003G234000 Sobic003G234000 Sobic008G018400--Sobic003G234000 Sobic009G197600 Sobic009G197600 Sobic008G018400--Sobic009G197600 Sobic001G461000 Sobic001G461000 Sobic008G018400--Sobic001G461000 Sobic001G489600 Sobic001G489600 Sobic008G018400--Sobic001G489600 Sobic006G075500 Sobic006G075500 Sobic008G018400--Sobic006G075500 Sobic004G311500 Sobic004G311500 Sobic008G018400--Sobic004G311500 Sobic004G332500 Sobic004G332500 Sobic003G364500--Sobic004G332500 Sobic005G186200 Sobic005G186200 Sobic003G364500--Sobic005G186200 Sobic004G203200 Sobic004G203200 Sobic003G364500--Sobic004G203200 Sobic002G266400 Sobic002G266400 Sobic003G364500--Sobic002G266400 Sobic003G364500--Sobic006G075500 Sobic009G141201 Sobic009G141201 Sobic003G364500--Sobic009G141201 Sobic002G012400 Sobic002G012400 Sobic003G364500--Sobic002G012400 Sobic003G364500--Sobic008G018400 Sobic003G364500--Sobic010G045700 Sobic010G083600 Sobic010G083600 Sobic010G045700--Sobic010G083600 Sobic003G341100 Sobic003G341100 Sobic010G045700--Sobic003G341100 Sobic003G352400 Sobic003G352400 Sobic010G045700--Sobic003G352400 Sobic004G297200 Sobic004G297200 Sobic010G045700--Sobic004G297200 Sobic009G044400 Sobic009G044400 Sobic010G045700--Sobic009G044400 Sobic001G341600 Sobic001G341600 Sobic010G045700--Sobic001G341600 Sobic004G053200 Sobic004G053200 Sobic010G045700--Sobic004G053200 Sobic001G097700 Sobic001G097700 Sobic010G045700--Sobic001G097700 Sobic008G036000 Sobic008G036000 Sobic010G045700--Sobic008G036000 Sobic001G051600--Sobic001G489600 Sobic001G476400 Sobic001G476400 Sobic001G051600--Sobic001G476400 Sobic006G095600 Sobic006G095600 Sobic001G051600--Sobic006G095600 Sobic002G203000 Sobic002G203000 Sobic001G051600--Sobic002G203000 Sobic007G057100 Sobic007G057100 Sobic001G051600--Sobic007G057100 Sobic004G051166 Sobic004G051166 Sobic001G051600--Sobic004G051166 Sobic008G159100 Sobic008G159100 Sobic001G051600--Sobic008G159100 Sobic001G081600 Sobic001G081600 Sobic001G051600--Sobic001G081600 Sobic004G025000 Sobic004G025000 Sobic001G051600--Sobic004G025000 Sobic004G280900 Sobic004G280900 Sobic003G234000--Sobic004G280900 Sobic002G140300 Sobic002G140300 Sobic003G234000--Sobic002G140300 Sobic003G234000--Sobic001G341600 Sobic010G209100 Sobic010G209100 Sobic003G234000--Sobic010G209100 Sobic001G538866 Sobic001G538866 Sobic003G234000--Sobic001G538866 Sobic001G077400 Sobic001G077400 Sobic003G234000--Sobic001G077400 Sobic009G217600 Sobic009G217600 Sobic003G234000--Sobic009G217600 Sobic007G077200 Sobic007G077200 Sobic003G234000--Sobic007G077200 Sobic009G192600 Sobic009G192600 Sobic003G234000--Sobic009G192600 Sobic006G211400 Sobic006G211400 Sobic009G197600--Sobic006G211400 Sobic006G101100 Sobic006G101100 Sobic009G197600--Sobic006G101100 Sobic009G197600--Sobic007G057100 Sobic001G062132 Sobic001G062132 Sobic009G197600--Sobic001G062132 Sobic009G197600--Sobic009G192600 Sobic003G142300 Sobic003G142300 Sobic009G197600--Sobic003G142300 Sobic005G111400 Sobic005G111400 Sobic009G197600--Sobic005G111400 Sobic001G017100 Sobic001G017100 Sobic009G197600--Sobic001G017100 Sobic009G197600--Sobic001G489600 Sobic007G196600 Sobic007G196600 Sobic001G461000--Sobic007G196600 Sobic007G168500 Sobic007G168500 Sobic001G461000--Sobic007G168500 Sobic007G145700 Sobic007G145700 Sobic001G461000--Sobic007G145700 Sobic006G265000 Sobic006G265000 Sobic001G461000--Sobic006G265000 Sobic001G343900 Sobic001G343900 Sobic001G461000--Sobic001G343900 Sobic001G314800 Sobic001G314800 Sobic001G461000--Sobic001G314800 Sobic007G044300 Sobic007G044300 Sobic001G461000--Sobic007G044300 Sobic002G373001 Sobic002G373001 Sobic001G461000--Sobic002G373001 Sobic006G044932 Sobic006G044932 Sobic001G461000--Sobic006G044932 Sobic001G489600--Sobic001G051600 Sobic001G489600--Sobic006G095600 Sobic001G077700 Sobic001G077700 Sobic001G489600--Sobic001G077700 Sobic001G489600--Sobic002G203000 Sobic001G489600--Sobic007G057100 Sobic001G489600--Sobic004G280900 Sobic001G489600--Sobic001G476400 Sobic009G071800 Sobic009G071800 Sobic001G489600--Sobic009G071800 Sobic004G286600 Sobic004G286600 Sobic001G489600--Sobic004G286600 Sobic006G075500--Sobic010G209100 Sobic007G085300 Sobic007G085300 Sobic006G075500--Sobic007G085300 Sobic006G066200 Sobic006G066200 Sobic006G075500--Sobic006G066200 Sobic009G247900 Sobic009G247900 Sobic006G075500--Sobic009G247900 Sobic001G192600 Sobic001G192600 Sobic006G075500--Sobic001G192600 Sobic003G430400 Sobic003G430400 Sobic006G075500--Sobic003G430400 Sobic006G148000 Sobic006G148000 Sobic006G075500--Sobic006G148000 Sobic003G380900 Sobic003G380900 Sobic006G075500--Sobic003G380900 Sobic004G241100 Sobic004G241100 Sobic006G075500--Sobic004G241100 Sobic006G179500 Sobic006G179500 Sobic004G311500--Sobic006G179500 Sobic004G311500--Sobic002G140300 Sobic006G089300 Sobic006G089300 Sobic004G311500--Sobic006G089300 Sobic004G311500--Sobic004G280900 Sobic006G228300 Sobic006G228300 Sobic004G311500--Sobic006G228300 Sobic001G040200 Sobic001G040200 Sobic004G311500--Sobic001G040200 Sobic004G311500--Sobic004G286600 Sobic004G311500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic004G311500--Sobic002G294700
Octagon: transcription factors


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