Gene annotation
Transcriptome id Sobic.008G096700.3,Sobic.008G096700.6,Sobic.008G096700.7,Sobic.008G096700.5,Sobic.008G096700.4,Sobic.008G096700.2,Sobic.008G096700.1
Synonym Sb08g014580
Functional annotation expressed protein
UniProt A0A1Z5R5V3 , C5YNP2 , A0A1Z5R6A8
Pfam -
Panther DB PTHR31448 PTHR31448:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16720 : Protein of unknown function, DUF593
RAP-DB (Rice) LOC_Os12g29740.1 : expressed protein
MaizeGDB (Corn) Zm00025a054120
Brachypodium -
Barley HORVU3Hr1G011640.1 , HORVU3Hr1G011640.2
Wheat TraesCS3D02G060800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G355200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
2 Sobic.003G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CDPK - CBL-interacting protein kinase 1(PubMedID : 31721651)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
3 Sobic.002G117500 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
4 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G282000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@suppressor of phythchrome A, putative, expressed -
6 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
7 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
8 Sobic.001G221800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
9 Sobic.006G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative leucine-rich repeatcontaining protein DDB_G0290503(PubMedID : 31721651)@- -
10 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
11 Sobic.009G100700 - -
12 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
13 Sobic.003G314000 jacalin-like lectin domain containing protein, expressed -
14 Sobic.004G035100 UOS1, putative, expressed -
15 Sobic.004G023300 membrane related protein CP5, putative, expressed -
16 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
17 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
18 Sobic.001G251800 OsFBK23 - F-box domain and kelch repeat containing protein, expressed -
19 Sobic.007G090900 heat shock protein-related, putative, expressed -
20 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic008G096700 Sobic008G096700 Sobic003G355200 Sobic003G355200 Sobic008G096700--Sobic003G355200 Sobic003G139500 Sobic003G139500 Sobic008G096700--Sobic003G139500 Sobic002G117500 Sobic002G117500 Sobic008G096700--Sobic002G117500 Sobic009G194500 Sobic009G194500 Sobic008G096700--Sobic009G194500 Sobic003G282000 Sobic003G282000 Sobic008G096700--Sobic003G282000 Sobic001G263100 Sobic001G263100 Sobic008G096700--Sobic001G263100 Sobic006G161500 Sobic006G161500 Sobic008G096700--Sobic006G161500 Sobic001G221800 Sobic001G221800 Sobic008G096700--Sobic001G221800 Sobic006G214300 Sobic006G214300 Sobic008G096700--Sobic006G214300 Sobic003G355200--Sobic001G221800 Sobic003G355200--Sobic006G214300 Sobic003G355200--Sobic003G139500 Sobic003G355200--Sobic008G096700 Sobic003G355200--Sobic003G282000 Sobic003G355200--Sobic009G194500 Sobic009G038900 Sobic009G038900 Sobic003G355200--Sobic009G038900 Sobic003G314000 Sobic003G314000 Sobic003G355200--Sobic003G314000 Sobic002G196600 Sobic002G196600 Sobic003G355200--Sobic002G196600 Sobic003G139500--Sobic001G263100 Sobic004G322700 Sobic004G322700 Sobic003G139500--Sobic004G322700 Sobic003G139500--Sobic006G161500 Sobic004G322600 Sobic004G322600 Sobic003G139500--Sobic004G322600 Sobic010G104800 Sobic010G104800 Sobic003G139500--Sobic010G104800 Sobic002G162400 Sobic002G162400 Sobic003G139500--Sobic002G162400 Sobic008G038500 Sobic008G038500 Sobic003G139500--Sobic008G038500 Sobic001G331600 Sobic001G331600 Sobic003G139500--Sobic001G331600 Sobic001G043000 Sobic001G043000 Sobic003G139500--Sobic001G043000 Sobic003G220100 Sobic003G220100 Sobic002G117500--Sobic003G220100 Sobic001G038601 Sobic001G038601 Sobic002G117500--Sobic001G038601 Sobic002G124600 Sobic002G124600 Sobic002G117500--Sobic002G124600 Sobic001G378100 Sobic001G378100 Sobic002G117500--Sobic001G378100 Sobic006G065100 Sobic006G065100 Sobic002G117500--Sobic006G065100 Sobic008G166400 Sobic008G166400 Sobic002G117500--Sobic008G166400 Sobic001G530900 Sobic001G530900 Sobic002G117500--Sobic001G530900 Sobic006G219600 Sobic006G219600 Sobic002G117500--Sobic006G219600 Sobic004G181600 Sobic004G181600 Sobic002G117500--Sobic004G181600 Sobic002G119100 Sobic002G119100 Sobic009G194500--Sobic002G119100 Sobic009G194500--Sobic006G161500 Sobic010G231300 Sobic010G231300 Sobic009G194500--Sobic010G231300 Sobic009G194500--Sobic004G322600 Sobic009G194500--Sobic008G038500 Sobic009G194500--Sobic003G314000 Sobic007G140700 Sobic007G140700 Sobic009G194500--Sobic007G140700 Sobic004G127800 Sobic004G127800 Sobic009G194500--Sobic004G127800 Sobic006G235400 Sobic006G235400 Sobic009G194500--Sobic006G235400 Sobic010G249700 Sobic010G249700 Sobic003G282000--Sobic010G249700 Sobic005G101200 Sobic005G101200 Sobic003G282000--Sobic005G101200 Sobic002G404800 Sobic002G404800 Sobic003G282000--Sobic002G404800 Sobic004G281800 Sobic004G281800 Sobic003G282000--Sobic004G281800 Sobic004G312600 Sobic004G312600 Sobic003G282000--Sobic004G312600 Sobic003G282000--Sobic008G038500 Sobic003G282000--Sobic009G038900 Sobic003G282000--Sobic004G322700 Sobic007G058100 Sobic007G058100 Sobic003G282000--Sobic007G058100 Sobic001G263100--Sobic007G058100 Sobic001G263100--Sobic010G231300 Sobic008G129900 Sobic008G129900 Sobic001G263100--Sobic008G129900 Sobic001G263100--Sobic002G162400 Sobic001G180200 Sobic001G180200 Sobic001G263100--Sobic001G180200 Sobic001G217900 Sobic001G217900 Sobic001G263100--Sobic001G217900 Sobic003G341300 Sobic003G341300 Sobic001G263100--Sobic003G341300 Sobic002G206300 Sobic002G206300 Sobic001G263100--Sobic002G206300 Sobic001G263100--Sobic006G235400 Sobic004G128900 Sobic004G128900 Sobic006G161500--Sobic004G128900 Sobic006G161500--Sobic010G231300 Sobic003G409700 Sobic003G409700 Sobic006G161500--Sobic003G409700 Sobic006G161500--Sobic006G235400 Sobic006G161500--Sobic004G322600 Sobic004G035100 Sobic004G035100 Sobic006G161500--Sobic004G035100 Sobic001G073300 Sobic001G073300 Sobic006G161500--Sobic001G073300 Sobic006G161500--Sobic002G119100 Sobic006G161500--Sobic009G194500 Sobic001G221800--Sobic003G355200 Sobic009G246300 Sobic009G246300 Sobic001G221800--Sobic009G246300 Sobic001G244700 Sobic001G244700 Sobic001G221800--Sobic001G244700 Sobic001G221800--Sobic004G322700 Sobic001G221800--Sobic006G214300 Sobic010G059000 Sobic010G059000 Sobic001G221800--Sobic010G059000 Sobic001G221800--Sobic003G282000 Sobic001G221800--Sobic004G322600 Sobic001G221800--Sobic003G139500 Sobic006G214300--Sobic005G101200 Sobic001G244600 Sobic001G244600 Sobic006G214300--Sobic001G244600 Sobic006G214300--Sobic009G194500 Sobic006G214300--Sobic003G314000 Sobic006G214300--Sobic002G119100 Sobic005G068700 Sobic005G068700 Sobic006G214300--Sobic005G068700 Sobic006G214300--Sobic009G038900 Sobic006G214300--Sobic004G322600 Sobic009G100700 Sobic009G100700 Sobic006G214300--Sobic009G100700
Octagon: transcription factors


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