Gene annotation
Transcriptome id Sobic.009G005600.1
Synonym Sb09g000700
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt A0A1B6P5M4
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50180 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os11g17720.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040840 , Zm00025a040842
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G323801 - -
2 Sobic.002G083700 - -
3 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
4 Sobic.001G438100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
5 Sobic.001G017000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal protein S6, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
6 Sobic.003G009900 cytochrome P450, putative, expressed -
7 Sobic.002G384400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
8 Sobic.004G193400 photosystem II 5 kDa protein, chloroplast precursor, putative, expressed -
9 Sobic.001G191000 ribosomal protein, putative, expressed K02988: RP-S5, MRPS5, small subunit ribosomal protein S5
10 Sobic.007G023300 photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed K02723: photosystem II PsbY protein
11 Sobic.003G300500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
12 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
13 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
14 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
15 Sobic.002G328900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
17 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
18 Sobic.010G265500 expressed protein -
19 Sobic.009G115050 - -
20 Sobic.004G317900 expressed protein -


Gene co-expression network
sample Sobic009G005600 Sobic009G005600 Sobic001G323801 Sobic001G323801 Sobic009G005600--Sobic001G323801 Sobic002G083700 Sobic002G083700 Sobic009G005600--Sobic002G083700 Sobic006G280050 Sobic006G280050 Sobic009G005600--Sobic006G280050 Sobic001G438100 Sobic001G438100 Sobic009G005600--Sobic001G438100 Sobic001G017000 Sobic001G017000 Sobic009G005600--Sobic001G017000 Sobic003G009900 Sobic003G009900 Sobic009G005600--Sobic003G009900 Sobic002G384400 Sobic002G384400 Sobic009G005600--Sobic002G384400 Sobic004G193400 Sobic004G193400 Sobic009G005600--Sobic004G193400 Sobic001G191000 Sobic001G191000 Sobic009G005600--Sobic001G191000 Sobic004G076000 Sobic004G076000 Sobic001G323801--Sobic004G076000 Sobic001G323801--Sobic001G017000 Sobic008G123600 Sobic008G123600 Sobic001G323801--Sobic008G123600 Sobic009G115050 Sobic009G115050 Sobic001G323801--Sobic009G115050 Sobic004G317900 Sobic004G317900 Sobic001G323801--Sobic004G317900 Sobic003G074600 Sobic003G074600 Sobic001G323801--Sobic003G074600 Sobic003G295800 Sobic003G295800 Sobic001G323801--Sobic003G295800 Sobic001G003600 Sobic001G003600 Sobic001G323801--Sobic001G003600 Sobic005G110436 Sobic005G110436 Sobic001G323801--Sobic005G110436 Sobic001G203000 Sobic001G203000 Sobic002G083700--Sobic001G203000 Sobic003G328200 Sobic003G328200 Sobic002G083700--Sobic003G328200 Sobic004G234200 Sobic004G234200 Sobic002G083700--Sobic004G234200 Sobic008G051000 Sobic008G051000 Sobic002G083700--Sobic008G051000 Sobic009G091800 Sobic009G091800 Sobic002G083700--Sobic009G091800 Sobic002G083700--Sobic004G193400 Sobic004G114800 Sobic004G114800 Sobic002G083700--Sobic004G114800 Sobic004G238500 Sobic004G238500 Sobic002G083700--Sobic004G238500 Sobic003G300500 Sobic003G300500 Sobic002G083700--Sobic003G300500 Sobic006G280050--Sobic001G191000 Sobic001G027600 Sobic001G027600 Sobic006G280050--Sobic001G027600 Sobic003G246400 Sobic003G246400 Sobic006G280050--Sobic003G246400 Sobic004G044000 Sobic004G044000 Sobic006G280050--Sobic004G044000 Sobic004G191200 Sobic004G191200 Sobic006G280050--Sobic004G191200 Sobic006G280050--Sobic004G317900 Sobic006G280050--Sobic001G017000 Sobic001G076500 Sobic001G076500 Sobic006G280050--Sobic001G076500 Sobic001G453300 Sobic001G453300 Sobic006G280050--Sobic001G453300 Sobic007G023300 Sobic007G023300 Sobic001G438100--Sobic007G023300 Sobic010G265500 Sobic010G265500 Sobic001G438100--Sobic010G265500 Sobic001G438100--Sobic004G193400 Sobic002G030200 Sobic002G030200 Sobic001G438100--Sobic002G030200 Sobic001G339100 Sobic001G339100 Sobic001G438100--Sobic001G339100 Sobic001G206200 Sobic001G206200 Sobic001G438100--Sobic001G206200 Sobic001G438100--Sobic004G238500 Sobic008G063500 Sobic008G063500 Sobic001G438100--Sobic008G063500 Sobic002G414400 Sobic002G414400 Sobic001G438100--Sobic002G414400 Sobic001G017000--Sobic003G295800 Sobic001G017000--Sobic004G076000 Sobic001G017000--Sobic004G317900 Sobic001G017000--Sobic001G323801 Sobic001G017000--Sobic001G027600 Sobic001G017000--Sobic006G280050 Sobic001G017000--Sobic003G246400 Sobic001G017000--Sobic003G328200 Sobic001G017000--Sobic004G191200 Sobic008G084200 Sobic008G084200 Sobic003G009900--Sobic008G084200 Sobic002G020000 Sobic002G020000 Sobic003G009900--Sobic002G020000 Sobic003G009900--Sobic009G115050 Sobic002G329500 Sobic002G329500 Sobic003G009900--Sobic002G329500 Sobic005G212400 Sobic005G212400 Sobic003G009900--Sobic005G212400 Sobic002G415400 Sobic002G415400 Sobic003G009900--Sobic002G415400 Sobic001G127700 Sobic001G127700 Sobic003G009900--Sobic001G127700 Sobic002G415300 Sobic002G415300 Sobic003G009900--Sobic002G415300 Sobic008G163200 Sobic008G163200 Sobic003G009900--Sobic008G163200 Sobic004G068700 Sobic004G068700 Sobic002G384400--Sobic004G068700 Sobic001G161300 Sobic001G161300 Sobic002G384400--Sobic001G161300 Sobic009G138900 Sobic009G138900 Sobic002G384400--Sobic009G138900 Sobic002G386400 Sobic002G386400 Sobic002G384400--Sobic002G386400 Sobic002G226100 Sobic002G226100 Sobic002G384400--Sobic002G226100 Sobic002G038300 Sobic002G038300 Sobic002G384400--Sobic002G038300 Sobic004G314800 Sobic004G314800 Sobic002G384400--Sobic004G314800 Sobic006G204100 Sobic006G204100 Sobic002G384400--Sobic006G204100 Sobic002G345200 Sobic002G345200 Sobic002G384400--Sobic002G345200 Sobic004G193400--Sobic004G234200 Sobic004G193400--Sobic002G414400 Sobic002G297300 Sobic002G297300 Sobic004G193400--Sobic002G297300 Sobic004G193400--Sobic007G023300 Sobic004G193400--Sobic009G091800 Sobic002G288300 Sobic002G288300 Sobic004G193400--Sobic002G288300 Sobic010G022100 Sobic010G022100 Sobic004G193400--Sobic010G022100 Sobic008G117400 Sobic008G117400 Sobic004G193400--Sobic008G117400 Sobic004G193400--Sobic002G030200 Sobic001G191000--Sobic006G280050 Sobic003G256200 Sobic003G256200 Sobic001G191000--Sobic003G256200 Sobic001G191000--Sobic003G246400 Sobic001G191000--Sobic001G027600 Sobic001G411300 Sobic001G411300 Sobic001G191000--Sobic001G411300 Sobic002G305700 Sobic002G305700 Sobic001G191000--Sobic002G305700 Sobic001G191000--Sobic001G453300 Sobic001G191000--Sobic004G191200 Sobic006G107600 Sobic006G107600 Sobic001G191000--Sobic006G107600
Octagon: transcription factors


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