Gene annotation
Transcriptome id Sobic.009G031600.1
Synonym Sb09g002660
Functional annotation expressed protein
UniProt C5YZH6
Pfam -
Panther DB PTHR31264 PTHR31264:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g36930.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G324300 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
2 Sobic.002G420800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stress responsive protein, putative, expressed -
3 Sobic.001G067000 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
4 Sobic.007G208200 expressed protein -
5 Sobic.001G050900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
6 Sobic.003G358200 reticulon domain containing protein, putative, expressed -
7 Sobic.001G437300 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
8 Sobic.007G128400 expressed protein -
9 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
10 Sobic.009G199300 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
11 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G377600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
13 Sobic.007G182500 bZIP family transcription factor, putative, expressed -
14 Sobic.004G294600 expressed protein -
15 Sobic.004G318400 MTD1, putative, expressed -
16 Sobic.004G196800 tetratricopeptide repeat containing protein, putative, expressed -
17 Sobic.003G304500 expressed protein -
18 Sobic.004G274500 OsFBD8 - F-box and FBD domain containing protein, expressed -
19 Sobic.006G143300 nuclear transport factor 2, putative, expressed -
20 Sobic.001G170500 expressed protein -


Gene co-expression network
sample Sobic009G031600 Sobic009G031600 Sobic003G324300 Sobic003G324300 Sobic009G031600--Sobic003G324300 Sobic002G420800 Sobic002G420800 Sobic009G031600--Sobic002G420800 Sobic001G067000 Sobic001G067000 Sobic009G031600--Sobic001G067000 Sobic007G208200 Sobic007G208200 Sobic009G031600--Sobic007G208200 Sobic001G050900 Sobic001G050900 Sobic009G031600--Sobic001G050900 Sobic003G358200 Sobic003G358200 Sobic009G031600--Sobic003G358200 Sobic001G437300 Sobic001G437300 Sobic009G031600--Sobic001G437300 Sobic007G128400 Sobic007G128400 Sobic009G031600--Sobic007G128400 Sobic004G102900 Sobic004G102900 Sobic009G031600--Sobic004G102900 Sobic003G324300--Sobic007G208200 Sobic005G064200 Sobic005G064200 Sobic003G324300--Sobic005G064200 Sobic004G318400 Sobic004G318400 Sobic003G324300--Sobic004G318400 Sobic009G199300 Sobic009G199300 Sobic003G324300--Sobic009G199300 Sobic007G182500 Sobic007G182500 Sobic003G324300--Sobic007G182500 Sobic007G012400 Sobic007G012400 Sobic003G324300--Sobic007G012400 Sobic007G018000 Sobic007G018000 Sobic003G324300--Sobic007G018000 Sobic006G143300 Sobic006G143300 Sobic003G324300--Sobic006G143300 Sobic003G324300--Sobic009G031600 Sobic007G040000 Sobic007G040000 Sobic002G420800--Sobic007G040000 Sobic009G090250 Sobic009G090250 Sobic002G420800--Sobic009G090250 Sobic005G173900 Sobic005G173900 Sobic002G420800--Sobic005G173900 Sobic001G246400 Sobic001G246400 Sobic002G420800--Sobic001G246400 Sobic005G174500 Sobic005G174500 Sobic002G420800--Sobic005G174500 Sobic002G420800--Sobic007G128400 Sobic001G270600 Sobic001G270600 Sobic002G420800--Sobic001G270600 Sobic002G267700 Sobic002G267700 Sobic002G420800--Sobic002G267700 Sobic006G117300 Sobic006G117300 Sobic002G420800--Sobic006G117300 Sobic003G026900 Sobic003G026900 Sobic001G067000--Sobic003G026900 Sobic001G067000--Sobic006G143300 Sobic001G067000--Sobic002G420800 Sobic002G230400 Sobic002G230400 Sobic001G067000--Sobic002G230400 Sobic007G076500 Sobic007G076500 Sobic001G067000--Sobic007G076500 Sobic002G147466 Sobic002G147466 Sobic001G067000--Sobic002G147466 Sobic004G196800 Sobic004G196800 Sobic001G067000--Sobic004G196800 Sobic007G199500 Sobic007G199500 Sobic001G067000--Sobic007G199500 Sobic010G193700 Sobic010G193700 Sobic001G067000--Sobic010G193700 Sobic007G208200--Sobic003G324300 Sobic007G208200--Sobic004G318400 Sobic007G208200--Sobic004G102900 Sobic007G194100 Sobic007G194100 Sobic007G208200--Sobic007G194100 Sobic007G208200--Sobic009G199300 Sobic007G150700 Sobic007G150700 Sobic007G208200--Sobic007G150700 Sobic003G304500 Sobic003G304500 Sobic007G208200--Sobic003G304500 Sobic007G208200--Sobic007G182500 Sobic007G208200--Sobic005G064200 Sobic001G050900--Sobic004G102900 Sobic010G196800 Sobic010G196800 Sobic001G050900--Sobic010G196800 Sobic001G050900--Sobic005G064200 Sobic001G050900--Sobic007G208200 Sobic003G295000 Sobic003G295000 Sobic001G050900--Sobic003G295000 Sobic005G098700 Sobic005G098700 Sobic001G050900--Sobic005G098700 Sobic001G050900--Sobic009G199300 Sobic001G050900--Sobic007G194100 Sobic001G050900--Sobic004G318400 Sobic010G093400 Sobic010G093400 Sobic003G358200--Sobic010G093400 Sobic003G358200--Sobic002G420800 Sobic007G152500 Sobic007G152500 Sobic003G358200--Sobic007G152500 Sobic006G164000 Sobic006G164000 Sobic003G358200--Sobic006G164000 Sobic003G358200--Sobic001G067000 Sobic001G379000 Sobic001G379000 Sobic003G358200--Sobic001G379000 Sobic001G294600 Sobic001G294600 Sobic003G358200--Sobic001G294600 Sobic001G419700 Sobic001G419700 Sobic003G358200--Sobic001G419700 Sobic010G207400 Sobic010G207400 Sobic003G358200--Sobic010G207400 Sobic001G437300--Sobic002G420800 Sobic002G049800 Sobic002G049800 Sobic001G437300--Sobic002G049800 Sobic006G250200 Sobic006G250200 Sobic001G437300--Sobic006G250200 Sobic005G226800 Sobic005G226800 Sobic001G437300--Sobic005G226800 Sobic009G139500 Sobic009G139500 Sobic001G437300--Sobic009G139500 Sobic005G033600 Sobic005G033600 Sobic001G437300--Sobic005G033600 Sobic001G437300--Sobic002G267700 Sobic001G437300--Sobic007G128400 Sobic003G211600 Sobic003G211600 Sobic001G437300--Sobic003G211600 Sobic007G128400--Sobic006G117300 Sobic007G128400--Sobic007G040000 Sobic007G128400--Sobic005G174500 Sobic007G128400--Sobic009G090250 Sobic007G128400--Sobic001G246400 Sobic003G321500 Sobic003G321500 Sobic007G128400--Sobic003G321500 Sobic002G089500 Sobic002G089500 Sobic007G128400--Sobic002G089500 Sobic007G128400--Sobic002G267700 Sobic001G392900 Sobic001G392900 Sobic007G128400--Sobic001G392900 Sobic004G102900--Sobic004G318400 Sobic004G102900--Sobic007G208200 Sobic004G102900--Sobic001G050900 Sobic001G154400 Sobic001G154400 Sobic004G102900--Sobic001G154400 Sobic006G066600 Sobic006G066600 Sobic004G102900--Sobic006G066600 Sobic002G240700 Sobic002G240700 Sobic004G102900--Sobic002G240700 Sobic004G102900--Sobic003G304500 Sobic004G102900--Sobic007G194100 Sobic002G113500 Sobic002G113500 Sobic004G102900--Sobic002G113500
Octagon: transcription factors


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